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  1.   master
  2.   root-doxygen-filenames.patch
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From 116be70d2786a3fecdfcd6445d06ad6f3768f5a6 Mon Sep 17 00:00:00 2001
From: Mattias Ellert <mattias.ellert@physics.uu.se>
Date: Fri, 3 Jul 2020 08:08:33 +0200
Subject: [PATCH 1/5] Fix \file references in doxygen markup

---
 core/base/v7/inc/ROOT/RDirectory.hxx         | 2 +-
 core/base/v7/inc/ROOT/RDirectoryEntry.hxx    | 2 +-
 core/base/v7/inc/ROOT/RError.hxx             | 2 +-
 core/base/v7/inc/ROOT/RIndexIter.hxx         | 2 +-
 core/base/v7/inc/ROOT/RLogger.hxx            | 2 +-
 core/base/v7/inc/ROOT/RTupleApply.hxx        | 2 +-
 core/base/v7/inc/ROOT/impl_tuple_apply.hxx   | 2 +-
 core/base/v7/src/RLogger.cxx                 | 2 +-
 core/clingutils/test/TClingUtilsTests.cxx    | 2 +-
 core/foundation/inc/ROOT/RNotFn.hxx          | 2 +-
 core/foundation/inc/ROOT/RSpan.hxx           | 2 +-
 core/foundation/inc/ROOT/span.hxx            | 2 +-
 core/foundation/src/FoundationUtils.cxx      | 2 +-
 gui/browsable/inc/ROOT/Browsable/RItem.hxx   | 2 +-
 gui/browsable/src/RHistDraw7Provider.cxx     | 2 +-
 gui/browsable/src/RSysFile.cxx               | 2 +-
 gui/browserv7/inc/ROOT/RBrowserReply.hxx     | 2 +-
 hist/hist/test/TFormulaGradientTests.cxx     | 2 +-
 hist/histdrawv7/inc/ROOT/RHistDrawable.hxx   | 2 +-
 hist/histv7/inc/ROOT/RAxis.hxx               | 2 +-
 hist/histv7/inc/ROOT/RAxisConfig.hxx         | 2 +-
 hist/histv7/inc/ROOT/RHist.hxx               | 2 +-
 hist/histv7/inc/ROOT/RHistBinIter.hxx        | 2 +-
 hist/histv7/inc/ROOT/RHistBufferedFill.hxx   | 2 +-
 hist/histv7/inc/ROOT/RHistConcurrentFill.hxx | 2 +-
 hist/histv7/inc/ROOT/RHistData.hxx           | 2 +-
 hist/histv7/inc/ROOT/RHistImpl.hxx           | 2 +-
 hist/histv7/inc/ROOT/RHistUtils.hxx          | 2 +-
 hist/histv7/inc/ROOT/RHistView.hxx           | 2 +-
 io/io/v7/inc/ROOT/RFile.hxx                  | 2 +-
 math/mathcore/test/CladDerivatorTests.cxx    | 2 +-
 math/mathcore/v7/inc/ROOT/RFit.hxx           | 2 +-
 tmva/tmva/inc/TMVA/NeuralNet.h               | 2 +-
 33 files changed, 33 insertions(+), 33 deletions(-)

diff --git a/core/base/v7/inc/ROOT/RDirectory.hxx b/core/base/v7/inc/ROOT/RDirectory.hxx
index 5331f91144..6d1a4b0541 100644
--- a/core/base/v7/inc/ROOT/RDirectory.hxx
+++ b/core/base/v7/inc/ROOT/RDirectory.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RDirectory.h
+/// \file ROOT/RDirectory.hxx
 /// \ingroup Base ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-07-31
diff --git a/core/base/v7/inc/ROOT/RDirectoryEntry.hxx b/core/base/v7/inc/ROOT/RDirectoryEntry.hxx
index a7258bc642..1a33e5003a 100644
--- a/core/base/v7/inc/ROOT/RDirectoryEntry.hxx
+++ b/core/base/v7/inc/ROOT/RDirectoryEntry.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RDirectoryEntry.h
+/// \file ROOT/RDirectoryEntry.hxx
 /// \ingroup Base ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-07-31
diff --git a/core/base/v7/inc/ROOT/RError.hxx b/core/base/v7/inc/ROOT/RError.hxx
index 7a0d363e7f..6af7a38f01 100644
--- a/core/base/v7/inc/ROOT/RError.hxx
+++ b/core/base/v7/inc/ROOT/RError.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RError.h
+/// \file ROOT/RError.hxx
 /// \ingroup Base ROOT7
 /// \author Jakob Blomer <jblomer@cern.ch>
 /// \date 2019-12-11
diff --git a/core/base/v7/inc/ROOT/RIndexIter.hxx b/core/base/v7/inc/ROOT/RIndexIter.hxx
index 1e290d82c8..fc424fdb8d 100644
--- a/core/base/v7/inc/ROOT/RIndexIter.hxx
+++ b/core/base/v7/inc/ROOT/RIndexIter.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RIndexIter.h
+/// \file ROOT/RIndexIter.hxx
 /// \ingroup Base ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2016-01-19
diff --git a/core/base/v7/inc/ROOT/RLogger.hxx b/core/base/v7/inc/ROOT/RLogger.hxx
index c1852656ee..d4e3e6e7bd 100644
--- a/core/base/v7/inc/ROOT/RLogger.hxx
+++ b/core/base/v7/inc/ROOT/RLogger.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/TLogger.h
+/// \file ROOT/RLogger.hxx
 /// \ingroup Base ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-03-29
diff --git a/core/base/v7/inc/ROOT/RTupleApply.hxx b/core/base/v7/inc/ROOT/RTupleApply.hxx
index 9a80bfcd6f..995246505f 100644
--- a/core/base/v7/inc/ROOT/RTupleApply.hxx
+++ b/core/base/v7/inc/ROOT/RTupleApply.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RTupleApply.h
+/// \file ROOT/RTupleApply.hxx
 /// \ingroup Base StdExt ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-09-06
diff --git a/core/base/v7/inc/ROOT/impl_tuple_apply.hxx b/core/base/v7/inc/ROOT/impl_tuple_apply.hxx
index dc12706906..68d6988f97 100644
--- a/core/base/v7/inc/ROOT/impl_tuple_apply.hxx
+++ b/core/base/v7/inc/ROOT/impl_tuple_apply.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/impl_tuple_apply.h
+/// \file ROOT/impl_tuple_apply.hxx
 /// \ingroup Base StdExt ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-07-09
diff --git a/core/base/v7/src/RLogger.cxx b/core/base/v7/src/RLogger.cxx
index 69aba0b05c..3ac8bb760f 100644
--- a/core/base/v7/src/RLogger.cxx
+++ b/core/base/v7/src/RLogger.cxx
@@ -1,4 +1,4 @@
-/// \file TLogger.cxx
+/// \file RLogger.cxx
 /// \ingroup Base ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-07-07
diff --git a/core/clingutils/test/TClingUtilsTests.cxx b/core/clingutils/test/TClingUtilsTests.cxx
index fca26705c3..fbc12cd352 100644
--- a/core/clingutils/test/TClingUtilsTests.cxx
+++ b/core/clingutils/test/TClingUtilsTests.cxx
@@ -1,4 +1,4 @@
-/// \file TClingUtilsTest.cxx
+/// \file TClingUtilsTests.cxx
 ///
 /// \brief The file contain unit tests which test the TClingUtils.h
 ///
diff --git a/core/foundation/inc/ROOT/RNotFn.hxx b/core/foundation/inc/ROOT/RNotFn.hxx
index a6dd13679e..a3877797f3 100644
--- a/core/foundation/inc/ROOT/RNotFn.hxx
+++ b/core/foundation/inc/ROOT/RNotFn.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RNotFn.h
+/// \file ROOT/RNotFn.hxx
 /// \ingroup Base StdExt
 /// \author Danilo Piparo, Enrico Guiraud
 /// \date 2018-01-19
diff --git a/core/foundation/inc/ROOT/RSpan.hxx b/core/foundation/inc/ROOT/RSpan.hxx
index 9e356493e6..b7366d58e7 100644
--- a/core/foundation/inc/ROOT/RSpan.hxx
+++ b/core/foundation/inc/ROOT/RSpan.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RSpan.h
+/// \file ROOT/RSpan.hxx
 /// \ingroup Base StdExt
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-09-06
diff --git a/core/foundation/inc/ROOT/span.hxx b/core/foundation/inc/ROOT/span.hxx
index ce1b0e1d96..185055bbe6 100644
--- a/core/foundation/inc/ROOT/span.hxx
+++ b/core/foundation/inc/ROOT/span.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/rhysd_span.h
+/// \file ROOT/span.hxx
 /// \ingroup Base StdExt
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-09-06
diff --git a/core/foundation/src/FoundationUtils.cxx b/core/foundation/src/FoundationUtils.cxx
index 9de395698b..d70e196130 100644
--- a/core/foundation/src/FoundationUtils.cxx
+++ b/core/foundation/src/FoundationUtils.cxx
@@ -1,4 +1,4 @@
-/// \file FoundationUtils.hxx
+/// \file FoundationUtils.cxx
 ///
 /// \brief The file contains utilities which are foundational and could be used
 /// across the core component of ROOT.
diff --git a/gui/browsable/inc/ROOT/Browsable/RItem.hxx b/gui/browsable/inc/ROOT/Browsable/RItem.hxx
index a07870a2cb..290587013e 100644
--- a/gui/browsable/inc/ROOT/Browsable/RItem.hxx
+++ b/gui/browsable/inc/ROOT/Browsable/RItem.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RBrowser.hxx
+/// \file ROOT/RItem.hxx
 /// \ingroup WebGui ROOT7
 /// \author Bertrand Bellenot <bertrand.bellenot@cern.ch>
 /// \author Sergey Linev <S.Linev@gsi.de>
diff --git a/gui/browsable/src/RHistDraw7Provider.cxx b/gui/browsable/src/RHistDraw7Provider.cxx
index 416db22472..e2e15303c6 100644
--- a/gui/browsable/src/RHistDraw7Provider.cxx
+++ b/gui/browsable/src/RHistDraw7Provider.cxx
@@ -1,4 +1,4 @@
-/// \file RDrawableRHist.cxx
+/// \file RHistDraw7Provider.cxx
 /// \ingroup rbrowser
 /// \author Bertrand Bellenot <bertrand.bellenot@cern.ch>
 /// \author Sergey Linev <S.Linev@gsi.de>
diff --git a/gui/browsable/src/RSysFile.cxx b/gui/browsable/src/RSysFile.cxx
index d5f481cb83..4447164f52 100644
--- a/gui/browsable/src/RSysFile.cxx
+++ b/gui/browsable/src/RSysFile.cxx
@@ -6,7 +6,7 @@
  * For the list of contributors see $ROOTSYS/README/CREDITS.             *
  *************************************************************************/
 
-/// \file ROOT/RFileBrowsable.cxx
+/// \file ROOT/RSysFile.cxx
 /// \ingroup rbrowser
 /// \author Sergey Linev <S.Linev@gsi.de>
 /// \date 2019-10-15
diff --git a/gui/browserv7/inc/ROOT/RBrowserReply.hxx b/gui/browserv7/inc/ROOT/RBrowserReply.hxx
index bdb94f60ea..35a2f1f978 100644
--- a/gui/browserv7/inc/ROOT/RBrowserReply.hxx
+++ b/gui/browserv7/inc/ROOT/RBrowserReply.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RBrowserRequest.hxx
+/// \file ROOT/RBrowserReply.hxx
 /// \ingroup WebGui ROOT7
 /// \author Bertrand Bellenot <bertrand.bellenot@cern.ch>
 /// \author Sergey Linev <S.Linev@gsi.de>
diff --git a/hist/hist/test/TFormulaGradientTests.cxx b/hist/hist/test/TFormulaGradientTests.cxx
index 8c11a56077..74c0930f03 100644
--- a/hist/hist/test/TFormulaGradientTests.cxx
+++ b/hist/hist/test/TFormulaGradientTests.cxx
@@ -1,4 +1,4 @@
-/// \file TFormulaGradientTests.h
+/// \file TFormulaGradientTests.cxx
 ///
 /// \brief The file contain unit tests which test the clad-based gradient
 ///        computations.
diff --git a/hist/histdrawv7/inc/ROOT/RHistDrawable.hxx b/hist/histdrawv7/inc/ROOT/RHistDrawable.hxx
index ac56b9c8f3..0b3b635d92 100644
--- a/hist/histdrawv7/inc/ROOT/RHistDrawable.hxx
+++ b/hist/histdrawv7/inc/ROOT/RHistDrawable.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RHistDrawable.h
+/// \file ROOT/RHistDrawable.hxx
 /// \ingroup HistDraw ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-07-09
diff --git a/hist/histv7/inc/ROOT/RAxis.hxx b/hist/histv7/inc/ROOT/RAxis.hxx
index 1d35ed9b93..0371a06f97 100644
--- a/hist/histv7/inc/ROOT/RAxis.hxx
+++ b/hist/histv7/inc/ROOT/RAxis.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RAxis.h
+/// \file ROOT/RAxis.hxx
 /// \ingroup Hist ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-03-23
diff --git a/hist/histv7/inc/ROOT/RAxisConfig.hxx b/hist/histv7/inc/ROOT/RAxisConfig.hxx
index 1e100986f0..34bf2f6a4a 100644
--- a/hist/histv7/inc/ROOT/RAxisConfig.hxx
+++ b/hist/histv7/inc/ROOT/RAxisConfig.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RAxisConfig.h
+/// \file ROOT/RAxisConfig.hxx
 /// \ingroup Hist ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2020-02-05
diff --git a/hist/histv7/inc/ROOT/RHist.hxx b/hist/histv7/inc/ROOT/RHist.hxx
index ebb319f1ef..5567683b27 100644
--- a/hist/histv7/inc/ROOT/RHist.hxx
+++ b/hist/histv7/inc/ROOT/RHist.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RHist.h
+/// \file ROOT/RHist.hxx
 /// \ingroup Hist ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-03-23
diff --git a/hist/histv7/inc/ROOT/RHistBinIter.hxx b/hist/histv7/inc/ROOT/RHistBinIter.hxx
index 60f57dd20e..ab77dfbeaa 100644
--- a/hist/histv7/inc/ROOT/RHistBinIter.hxx
+++ b/hist/histv7/inc/ROOT/RHistBinIter.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RHistBinIter.h
+/// \file ROOT/RHistBinIter.hxx
 /// \ingroup Hist ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-08-07
diff --git a/hist/histv7/inc/ROOT/RHistBufferedFill.hxx b/hist/histv7/inc/ROOT/RHistBufferedFill.hxx
index bb1cade29b..8efe00e207 100644
--- a/hist/histv7/inc/ROOT/RHistBufferedFill.hxx
+++ b/hist/histv7/inc/ROOT/RHistBufferedFill.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RHistBufferedFill.h
+/// \file ROOT/RHistBufferedFill.hxx
 /// \ingroup Hist ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-07-03
diff --git a/hist/histv7/inc/ROOT/RHistConcurrentFill.hxx b/hist/histv7/inc/ROOT/RHistConcurrentFill.hxx
index a6b4b6a8e2..8ff76eb659 100644
--- a/hist/histv7/inc/ROOT/RHistConcurrentFill.hxx
+++ b/hist/histv7/inc/ROOT/RHistConcurrentFill.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RHistConcurrentFill.h
+/// \file ROOT/RHistConcurrentFill.hxx
 /// \ingroup Hist ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-07-03
diff --git a/hist/histv7/inc/ROOT/RHistData.hxx b/hist/histv7/inc/ROOT/RHistData.hxx
index 901bd5c33a..9757986ff4 100644
--- a/hist/histv7/inc/ROOT/RHistData.hxx
+++ b/hist/histv7/inc/ROOT/RHistData.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RHistData.h
+/// \file ROOT/RHistData.hxx
 /// \ingroup Hist ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-06-14
diff --git a/hist/histv7/inc/ROOT/RHistImpl.hxx b/hist/histv7/inc/ROOT/RHistImpl.hxx
index 483d879f0e..b6d4b2c6b5 100644
--- a/hist/histv7/inc/ROOT/RHistImpl.hxx
+++ b/hist/histv7/inc/ROOT/RHistImpl.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RHistImpl.h
+/// \file ROOT/RHistImpl.hxx
 /// \ingroup Hist ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-03-23
diff --git a/hist/histv7/inc/ROOT/RHistUtils.hxx b/hist/histv7/inc/ROOT/RHistUtils.hxx
index 3733113c2b..08a342bf61 100644
--- a/hist/histv7/inc/ROOT/RHistUtils.hxx
+++ b/hist/histv7/inc/ROOT/RHistUtils.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RHistData.h
+/// \file ROOT/RHistUtils.hxx
 /// \ingroup Hist ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2016-06-01
diff --git a/hist/histv7/inc/ROOT/RHistView.hxx b/hist/histv7/inc/ROOT/RHistView.hxx
index b65d3518dd..d2b40e0f35 100644
--- a/hist/histv7/inc/ROOT/RHistView.hxx
+++ b/hist/histv7/inc/ROOT/RHistView.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RHistView.h
+/// \file ROOT/RHistView.hxx
 /// \ingroup Hist ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-08-06
diff --git a/io/io/v7/inc/ROOT/RFile.hxx b/io/io/v7/inc/ROOT/RFile.hxx
index 6d3baaec05..c371a25875 100644
--- a/io/io/v7/inc/ROOT/RFile.hxx
+++ b/io/io/v7/inc/ROOT/RFile.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RFile.h
+/// \file ROOT/RFile.hxx
 /// \ingroup Base ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-07-31
diff --git a/math/mathcore/test/CladDerivatorTests.cxx b/math/mathcore/test/CladDerivatorTests.cxx
index e4289a7286..d1682094e0 100644
--- a/math/mathcore/test/CladDerivatorTests.cxx
+++ b/math/mathcore/test/CladDerivatorTests.cxx
@@ -1,4 +1,4 @@
-/// \file CladDerivator.h
+/// \file CladDerivatorTests.cxx
 ///
 /// \brief The file contain unit tests which test the CladDerivator facility.
 ///
diff --git a/math/mathcore/v7/inc/ROOT/RFit.hxx b/math/mathcore/v7/inc/ROOT/RFit.hxx
index 4fae336242..5b92733152 100644
--- a/math/mathcore/v7/inc/ROOT/RFit.hxx
+++ b/math/mathcore/v7/inc/ROOT/RFit.hxx
@@ -1,4 +1,4 @@
-/// \file ROOT/RFit.h
+/// \file ROOT/RFit.hxx
 /// \ingroup MathCore ROOT7
 /// \author Axel Naumann <axel@cern.ch>
 /// \date 2015-09-06
diff --git a/tmva/tmva/inc/TMVA/NeuralNet.h b/tmva/tmva/inc/TMVA/NeuralNet.h
index 31229cb1cf..bae98a48b2 100644
--- a/tmva/tmva/inc/TMVA/NeuralNet.h
+++ b/tmva/tmva/inc/TMVA/NeuralNet.h
@@ -1,5 +1,5 @@
 /**
- * @file NeuralNet
+ * @file TMVA/NeuralNet.h
  * @author  Peter Speckmayer
  * @version 1.0
  *
-- 
2.26.2
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