# Note: package is python 3 only

%global srcname pyphi

%bcond_without tests

%global _description %{expand:

PyPhi is a Python library for computing integrated information, and the

associated quantities and objects.

If you use this code, please cite the manuscript:

Mayner WGP, Marshall W, Albantakis L, Findlay G, Marchman R, Tononi G (2017).

PyPhi: A toolbox for integrated information. arXiv:1712.09644 [q-bio.NC].

The manuscript is available at https://arxiv.org/abs/1712.09644.}

%{?python_enable_dependency_generator}

Name:           python-%{srcname}

Version:        1.2.0

Release:        9%{?dist}

Summary:        A library for computing integrated information

License:        GPLv3

URL:            %{pypi_url}

Source0:        https://github.com/wmayner/%{srcname}/archive/%{version}/%{srcname}-%{version}.tar.gz

BuildArch:      noarch

%description %_description

%package -n python3-%{srcname}

Summary:        %{summary}

BuildRequires: make

BuildRequires:  python3-devel

# To build docs, and run tests

BuildRequires:  %{py3_dist asv}

BuildRequires:  %{py3_dist decorator}

BuildRequires:  %{py3_dist joblib}

BuildRequires:  %{py3_dist numpy}

BuildRequires:  %{py3_dist psutil}

BuildRequires:  %{py3_dist pyemd}

BuildRequires:  %{py3_dist pymongo}

BuildRequires:  %{py3_dist pytest}

BuildRequires:  %{py3_dist pytest-lazy-fixture}

BuildRequires:  %{py3_dist pyyaml}

BuildRequires:  %{py3_dist redis}

BuildRequires:  %{py3_dist scipy}

BuildRequires:  %{py3_dist sphinx}

BuildRequires:  %{py3_dist sphinx_rtd_theme}

BuildRequires:  %{py3_dist setuptools}

BuildRequires:  %{py3_dist tblib}

BuildRequires:  %{py3_dist tqdm}

BuildRequires:  %{py3_dist wheel}

%{?python_provide:%python_provide python3-%{srcname}}

%description -n python3-%{srcname} %_description

%package doc

Summary:        %{summary}

%description doc

Documentation for %{name}

%prep

%autosetup -n %{srcname}-%{version}

# sphinx 1.3+, it's an extension

# Also sent upstream: https://github.com/wmayner/pyphi/pull/22

sed -i "s/sphinxcontrib.napoleon/sphinx.ext.napoleon/" docs/conf.py

find pyphi -name "*.py" -exec sed -i '/#!\/usr\/bin\/env python3/ d' '{}' \;

%build

%py3_build

make -C docs SPHINXBUILD=sphinx-build-3 html

rm docs/_build/html/{.doctrees,.buildinfo} -vf

%install

%py3_install

%check

%if %{with tests}

# Tests fails on s390x: https://github.com/wmayner/pyphi/issues/41

%ifnarch s390x

py.test-%{python3_version}

%endif

%endif

%files -n python3-%{srcname}

%license LICENSE.md

%doc README.md CHANGELOG.md CACHING.rst redis.conf

%{python3_sitelib}/%{srcname}

%{python3_sitelib}/%{srcname}-%{version}-py%{python3_version}.egg-info

%files doc

%license LICENSE.md

%doc docs/_build/html/

%changelog

* Wed Jan 27 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.2.0-9

- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild

* Sat Aug 01 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.2.0-8

- Second attempt - Rebuilt for

  https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild

* Wed Jul 29 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.2.0-7

- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild

* Tue May 26 2020 Miro Hrončok <mhroncok@redhat.com> - 1.2.0-6

- Rebuilt for Python 3.9

* Thu Jan 30 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.2.0-5

- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild

* Mon Aug 19 2019 Miro Hrončok <mhroncok@redhat.com> - 1.2.0-4

- Rebuilt for Python 3.8

* Fri Jul 26 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.2.0-3

- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild

* Fri Jul 12 2019 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 1.2.0-2

- Enable tests

* Sat Jun 22 2019 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 1.2.0-1

- Update to 1.2.0

* Sat Feb 02 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.1.0-3

- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild

* Mon Nov 19 2018 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 1.1.0-2

- Update license

- Fix doc generation

- Correct rpmlint errors

* Wed Nov 14 2018 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 1.1.0-1

- Initial rpm build