%global buildid    240

%global octpkg  COPASI

%global with_python  1

# Disabled bindings

%global with_java    0

%global with_octave  0

%global with_perl    0

%global with_r       0

%global with_mono    0

#

# Use QWT6? (Experimental)

%global with_qwt6    0

%if 0%{?with_octave}

# Exclude .oct files from provides

%global __provides_exclude_from ^%{octpkglibdir}/.*\\.oct$

%global octave_ver %(octave-config -p VERSION || echo 0)

%endif

%global _docdir_fmt %{name}

%global blaslib flexiblas

%global lapacklib flexiblas

Name:  COPASI

Summary: Biochemical network simulator

Version: 4.30.%{buildid}

Release: 1%{?dist}

## Artistic 2.0 is main license

## GPLv2+ is related to a Mixed Source Licensing Scenario

# with 'copasi/randomGenerator/Cmt19937.cpp' file

## GPLv3+ is related to a Mixed Source Licensing Scenario

# with 'copasi/function/CEvaluationParser_yacc.cpp' file

## BSD is related to a Mixed Source Licensing Scenario

# with 'copasi/randomGenerator/Cmt19937.cpp' file

## Any files with different licenses are not involved

License: Artistic 2.0 and GPLv3+ and BSD

URL:   http://copasi.org/

Source0: https://github.com/copasi/COPASI/archive/Build-%{buildid}/%{name}-Build-%{buildid}.tar.gz

Source1: %{name}.appdata.xml

%if 0%{?with_qwt6}

BuildRequires: qwt-devel

%endif

BuildRequires: qwt-qt5-devel

BuildRequires: qwtplot3d-qt5-devel >= 0.3.1a-4

BuildRequires: qt5-qtbase-devel

BuildRequires: qt5-qtwebkit-devel

BuildRequires: qt5-qtdatavis3d-devel

BuildRequires: libmml-qt5-devel

BuildRequires: freeglut-devel

BuildRequires: libsbml-devel

BuildRequires: libsedml-devel >= 1:0.4.3-3

BuildRequires: libnuml-devel

BuildRequires: libCombine-devel

BuildRequires: zipper-devel

BuildRequires: libsbw-devel

BuildRequires: raptor-devel

BuildRequires: mesa-libGL-devel

BuildRequires: mesa-libGLU-devel

BuildRequires: cppunit-devel

BuildRequires: libcurl-devel

BuildRequires: libxslt-devel

BuildRequires: pkgconf-pkg-config

BuildRequires: %{blaslib}-devel

BuildRequires: crossguid2-devel >= 0:0.2.2

BuildRequires: desktop-file-utils

BuildRequires: swig

BuildRequires: expat-devel

BuildRequires: f2c

BuildRequires: flex

BuildRequires: cmake, gcc, gcc-c++

BuildRequires: bison

BuildRequires: bzip2-devel

BuildRequires: ImageMagick

BuildRequires: libappstream-glib

BuildRequires: minizip-devel

%ifarch x86_64

BuildRequires: nativejit-devel

%endif

%ifnarch s390x

BuildRequires: google-cpu_features-devel

%endif

Requires: %{name}-data = %{version}-%{release}

Requires: libsedml%{?_isa} >= 1:0.4.3-3

Obsoletes: R-%{octpkg} < 0:4.25.213-1

Obsoletes: perl-%{octpkg} < 0:4.25.213-1

Obsoletes: %{name}-sharp < 0:4.25.213-1

# This patch sets libraries' installation paths

Patch0: %{name}-fix_install_libpaths.patch

# This patch sets paths to find QWT5, QTMML, SBW files on Fedora

Patch1: %{name}-find_QWT5-QTMML-SBW.patch

# This patch sets paths to find QWT6, QTMML, SBW files on Fedora

Patch3: %{name}-find_QWT6-QTMML-SBW.patch

# This patch sets paths to find QTPLOT3D-QT4 files on Fedora

Patch2: %{name}-set_QWTPLOT3D_QT4.patch

# This patch fixes executable permissions of CopasiSE and CopasiUI

Patch4: %{name}-fix_exe_permissions.patch

# This patch sets paths to find QTPLOT3D-QT5 files on Fedora

Patch5: %{name}-set_QWTPLOT3D_QT5.patch

# This patch sets paths to find libCombine files on Fedora

Patch6: %{name}-libCombine_paths.patch

# This patch sets paths to find libcroosguid2 files on Fedora

Patch7: %{name}-find_crossguid2.patch

# This patch forces the use of C++17 standard

Patch8: %{name}-use_c++17.patch

# This patch sets paths to find libsedml files on Fedora

Patch9: %{name}-find_libsedml.patch

# This patch sets paths to find libsbw files on Fedora

Patch10: %{name}-find_sbw.patch

# rhbz#1896407

Patch11: %{name}-porting_to_python310.patch

%description

COPASI is a software application for simulation and analysis of biochemical

networks and their dynamics.

COPASI is a stand-alone program that supports models in the SBML standard

and can simulate their behavior using ODEs or Gillespie's stochastic

simulation algorithm; arbitrary discrete events can be included in such

simulations.

COPASI carries out several analyses of the network and its dynamics and 

has extensive support for parameter estimation and optimization. 

COPASI provides means to visualize data in customizable plots, histograms and 

animations of network diagrams.

%package gui

Summary: The COPASI graphical user interface

Requires: %{name}-data = %{version}-%{release}

Requires: %{name}-doc = %{version}-%{release}

%description gui

COPASI is a software application for simulation and analysis of biochemical

networks and their dynamics.

COPASI is a stand-alone program that supports models in the SBML standard

and can simulate their behavior using ODEs or Gillespie's stochastic

simulation algorithm; arbitrary discrete events can be included in such

simulations.

COPASI carries out several analyses of the network and its dynamics and 

has extensive support for parameter estimation and optimization. 

COPASI provides means to visualize data in customizable plots, histograms and 

animations of network diagrams.

This package provides the COPASI graphical user interface.

%package data

Summary: COPASI data files 

BuildArch: noarch

%description data

This package provides the COPASI data, example and license files.

%if 0%{?with_python}

%package -n python3-%{name}

Summary: %{name} Python3 Bindings

BuildRequires: python3-devel

BuildRequires: python3-setuptools

Obsoletes: python2-%{name} < 0:4.25.213-1

%{?python_provide:%python_provide python3-%{name}}

%description -n python3-%{octpkg}

This package provides the libraries to 

develop applications with COPASI Python3 bindings.

%endif

%if 0%{?with_java}

%package -n java-%{octpkg}

Summary: %{name} Java Bindings

BuildRequires:  java-1.8.0-openjdk-devel

Requires: java-headless >= 1:minimal_required_version

Requires: javapackages-tools 

%description -n java-%{octpkg}

This package provides the libraries to 

develop applications with COPASI Java bindings.

%endif

%if 0%{?with_octave}

%package -n octave-%{octpkg}

Summary: %{name} Octave Bindings

BuildRequires:  octave-devel

Requires:       octave(api) = %{octave_api}

Requires(post): octave

Requires(postun): octave

%description -n octave-%{octpkg}

This package provides the libraries to 

develop applications with COPASI Octave bindings.

%endif

%if 0%{?with_perl}

%package -n perl-%{octpkg}

Summary: %{name} Perl Bindings

BuildRequires: perl-interpreter

BuildRequires: perl-devel

BuildRequires: perl-generators

BuildRequires: perl(ExtUtils::MakeMaker)

Requires:      perl(:MODULE_COMPAT_%(eval "`perl -V:version`"; echo $version))

%description -n perl-%{octpkg}

This package provides the libraries to 

develop applications with COPASI Perl bindings.

%endif

%if 0%{?with_r}

%package -n R-%{octpkg}

Summary: %{name} R Bindings

BuildRequires: R-devel, R-core-devel, tex(latex)

Requires:      R-core%{?_isa}

%description -n R-%{octpkg}

This package provides the libraries to 

develop applications with COPASI R bindings.

%endif

%if 0%{?with_mono}

%package sharp

Summary: %{name} Mono Bindings

BuildRequires: xerces-c-devel, libxml2-devel, expat-devel

BuildRequires: mono-core

BuildRequires: make

%description sharp

This package provides the libraries to 

develop applications with COPASI C# bindings.

%endif

%package doc

Summary: COPASI HTML documentation and examples

BuildArch: noarch

%description doc

COPASI HTML documentation and examples.

%prep

%autosetup -n %{name}-Build-%{buildid} -N

# This an old and obsolete license file

rm -f license.txt

# Convert to utf-8

for file in `find copasi -type f \( -name "*.cpp" \)`; do

    iconv -f ISO-8859-1 -t UTF-8 -o $file.new $file && \

    touch -r $file $file.new && \

    mv $file.new $file

done

%patch0 -p0 -b .fix_install_libpaths

%patch4 -p0 -b .fix_exe_permissions

%patch6 -p0 -b .libCombine_paths

%patch7 -p0 -b .find_crossguid2

%patch8 -p0 -b .use_c++17

%patch9 -p0 -b .find_libsedml

%patch10 -p0 -b .find_sbw

%if 0%{?with_python}

%if 0%{?python3_version_nodots} > 39

%patch11 -p1 -b .porting_to_python310

%endif

%endif

%if 0%{?with_qwt6}

%patch3 -p0

%else

%patch1 -p0

%endif

# Set Qwt libdir

sed -e 's|@@libdir@@|%{_libdir}|g' -i CMakeModules/FindQWT.cmake

%patch5 -p0 -b .QWTPLOT3D_QT5

# Set QTPLOT3D-QT5 paths

sed -e 's|@@qtplot3d_includedir@@|%{_qt5_headerdir}/qwtplot3d-qt5|g' -i CMakeModules/FindQWTPLOT3D.cmake

sed -e 's|@@qtplot3d_libdir@@|%{_qt5_libdir}|g' -i CMakeModules/FindQWTPLOT3D.cmake

# Set QtMmlQt5 paths

sed -e 's|@@_libmml_includedir@@|%{_qt5_headerdir}/libmml-qt5|g' -i CMakeModules/FindMML.cmake

sed -e 's|@@_libmml_libdir@@|%{_qt5_libdir}|g' -i CMakeModules/FindMML.cmake

# Exclude obsolete functions

# http://tracker.copasi.org/show_bug.cgi?id=2810#c1

sed -i.bak '/double sqrt(doublereal);/d' copasi/optimization/CNL2SOL.cpp

sed -i.bak '/double pow_dd(doublereal *, doublereal *);/d' copasi/optimization/CNL2SOL.cpp

sed -i.bak '/int s_copy(char *, char *, ftnlen, ftnlen);/d' copasi/optimization/CNL2SOL.cpp

sed -i.bak '/double sqrt(doublereal);/d' copasi/odepack++/dc_decsol.cpp

sed -i.bak '/double sqrt(doublereal),/d' copasi/odepack++/CRadau5.cpp

sed -i.bak '/double pow_dd(doublereal *,/d' copasi/odepack++/CRadau5.cpp

sed -i.bak '/C_FLOAT64 d_lg10(C_FLOAT64 *);/d' copasi/optimization/CPraxis.cpp

%build

mkdir -p build

export CXXFLAGS="-I$PWD/copasi/lapack -I$PWD/copasi/CopasiSBW -I%{_includedir}/%{blaslib} %{optflags} %{__global_ldflags}"

export LDFLAGS="%{__global_ldflags} -lbz2"

%cmake3 -B build -S copasi \

 -Wno-dev -DCOPASI_OVERRIDE_VERSION:STRING=%{version} \

%if 0%{?with_python}

 -DENABLE_PYTHON:BOOL=ON \

 -DPYTHON_EXECUTABLE:FILEPATH=%{__python3} \

 -DPYTHON_INCLUDE_DIR:PATH=%{_includedir}/python%{python3_version}%(python3-config --abiflags) \

 -DPYTHON_LIBRARY:FILEPATH=%{_libdir}/libpython%{python3_version}%(python3-config --abiflags).so \

%else

 -DENABLE_PYTHON:BOOL=OFF \

%endif

%if 0%{?with_java}

 -DENABLE_JAVA:BOOL=ON \

 -DBUILD_JAVA_EXAMPLES:BOOL=OFF \

%endif

%if 0%{?with_octave}

 -DENABLE_OCTAVE:BOOL=ON \

 -DCOPASI_version:STRING=%{version} \

 -DOCTAVE_INCLUDE_DIR:PATH=%{_includedir}/octave-%{octave_ver} \

 -DOCTAVE_OCTINTERP_LIBRARY:FILEPATH=%{_libdir}/octave/%{octave_ver}/liboctinterp.so \

 -DOCTAVE_OCTAVE_LIBRARY:FILEPATH=%{_libdir}/octave/%{octave_ver}/liboctave.so \

%endif

%if 0%{?with_perl}

 -DENABLE_PERL:BOOL=ON \

%endif

%if 0%{?with_r}

 -DENABLE_R:BOOL=ON \

 -DR_INCLUDE_DIRS:PATH=%{_includedir}/R \

%endif

%if 0%{?with_mono}

 -DENABLE_CSHARP:BOOL=ON \

 -DBUILD_CS_EXAMPLES:BOOL=OFF \

%endif

 -DCSHARP_COMPILER:FILEPATH=%{_bindir}/mcs \

%if 0%{?with_qwt6}

 -DQWT_VERSION_STRING:STRING="%(pkg-config --modversion qwt)" \

%endif

 -DSELECT_QT=Qt5 \

 -DSITE:STRING=fedora -DF2C_INTEGER=int -DF2C_LOGICAL=long \

 -DCMAKE_CXX_FLAGS_RELEASE:STRING=" -I$PWD/copasi/lapack -I$PWD/copasi/CopasiSBW -I%{_includedir}/%{blaslib} %{optflags} %{__global_ldflags} -DNDEBUG" \

 -DCOPASI_INSTALL_C_API=OFF -DCombine_DIR:PATH=%{_libdir}/cmake \

 -DCMAKE_SHARED_LINKER_FLAGS:STRING="%{__global_ldflags} -pthread" \

 -DCMAKE_EXE_LINKER_FLAGS:STRING="%{__global_ldflags} -pthread" \

 -DQT_QMAKE_EXECUTABLE:FILEPATH=%{_bindir}/qmake-qt5 \

 -DQWT_VERSION_STRING:STRING="%(pkg-config --modversion Qt5Qwt6)" \

 -DQWT_LIBRARY:FILEPATH=%{_qt5_libdir}/libqwt-qt5.so \

 -DQWT_INCLUDE_DIR:PATH=%{_qt5_headerdir}/qwt \

 -DBUILD_GUI:BOOL=ON -DBUILD_COPASISBW:BOOL=ON -DENABLE_MML:BOOL=ON -DENABLE_USE_SBMLUNIT=ON \

 -DMML_INCLUDE_DIR:PATH=%{_qt5_headerdir}/libmml-qt5 -DMML_LIBRARY:FILEPATH=%{_qt5_libdir}/libmml.so \

 -DENABLE_SBW_INTEGRATION=ON -DBUILD_CXX_EXAMPLES=OFF \

 -DENABLE_COPASI_BANDED_GRAPH:BOOL=ON -DENABLE_COPASI_SEDML:BOOL=ON \

 -DENABLE_COPASI_NONLIN_DYN_OSCILLATION:BOOL=ON -DENABLE_COPASI_EXTUNIT:BOOL=ON \

 -DCOPASI_OVERWRITE_USE_LAPACK:BOOL=ON -DNO_BLAS_WRAP:BOOL=ON -DBLA_VENDOR=Generic \

 -DBLAS_blas_LIBRARY:FILEPATH=%{_libdir}/lib%{blaslib}.so \

 -DLAPACK_lapack_LIBRARY:FILEPATH=%{_libdir}/lib%{lapacklib}.so \

 -DCROSSGUID_INCLUDE_DIR:PATH=%{_includedir}/crossguid2 \

 -DENABLE_FLEX_BISON:BOOL=ON -DENABLE_COPASI_PARAMETERFITTING_RESIDUAL_SCALING:BOOL=ON \

 -DENABLE_WITH_MERGEMODEL:BOOL=ON -DENABLE_USE_MATH_CONTAINER:BOOL=ON \

 -DLIBSBML_INCLUDE_DIR:PATH=%{_includedir}/sbml -DLIBSBML_SHARED:BOOL=ON -DLIBSBML_LIBRARY:FILEPATH=%{_libdir}/libsbml.so \

 -DF2C_INCLUDE_DIR:PATH=%{_includedir} \

 -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=%{_libdir} \

 -DCMAKE_INSTALL_PREFIX:PATH=%{_prefix} -DENABLE_GPROF:BOOL=OFF \

 -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON \

 -DENABLE_FLEX_BISON:BOOL=ON -DBISON_EXECUTABLE:FILEPATH=%{_bindir}/bison \

 -DPREFER_STATIC:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=YES .

%make_build -C build

%install

%make_install -C build

# Remove directory of examples

%if 0%{?with_python}

rm -rf  $RPM_BUILD_ROOT%{python3_sitearch}/copasi/examples

%endif

# For R library only

%if 0%{?with_r}

mkdir -p $RPM_BUILD_ROOT%{_libdir}/R/library

%{_bindir}/R CMD INSTALL -l $RPM_BUILD_ROOT%{_libdir}/R/library build/copasi/bindings/R/%{name}_*.tar.gz

test -d %{octpkg}/src && (cd %{octpkg}/src; rm -f *.o *.so)

rm -rf $RPM_BUILD_ROOT%{_libdir}/R/library/%{octpkg}/R.css

chmod a+x $RPM_BUILD_ROOT%{_libdir}/R/library/%{octpkg}/libs/COPASI.so

%endif

%if 0%{?with_octave}

mkdir -p $RPM_BUILD_ROOT%{octpkgdir}/packinfo

install -pm 644 copasi/ArtisticLicense.txt $RPM_BUILD_ROOT%{octpkgdir}/packinfo

%endif

# Install .xpm icon files

install -pm 644 copasi/UI/icons/Copasi48-Alpha.xpm $RPM_BUILD_ROOT%{_datadir}/icons/copasi/icons

# Make a .desktop file

mkdir -p $RPM_BUILD_ROOT%{_datadir}/applications

cat > $RPM_BUILD_ROOT%{_datadir}/applications/%{name}.desktop <

[Desktop Entry]

Version=1.0

Name=CopasiUI

Comment=Use COPASI by a Graphical User Interface

Exec=CopasiUI --copasidir %{_prefix}

Icon=%{_datadir}/icons/copasi/icons/Copasi48-Alpha.xpm

Terminal=false

Type=Application

Categories=Science;

EOF

# Install appdata file

mkdir -p $RPM_BUILD_ROOT%{_metainfodir}

install -pm 644 %{SOURCE1} $RPM_BUILD_ROOT%{_metainfodir}/

%check

desktop-file-validate $RPM_BUILD_ROOT%{_datadir}/applications/%{name}.desktop

appstream-util validate-relax --nonet $RPM_BUILD_ROOT%{_metainfodir}/*.appdata.xml

%files

%{_bindir}/CopasiSE

%files gui

%{_bindir}/CopasiUI

%{_bindir}/CopasiSBW

%{_datadir}/icons/copasi/

%{_datadir}/applications/%{name}.desktop

%{_metainfodir}/*.appdata.xml

%files data

%license copasi/ArtisticLicense.txt

%{_datadir}/copasi/

%exclude %{_datadir}/copasi/doc/

%if 0%{?with_python}

%files -n python3-%{octpkg}

%license copasi/ArtisticLicense.txt

%{python3_sitearch}/copasi/

%{python3_sitearch}/*.pth

%endif

%if 0%{?with_java}

%files -n java-%{octpkg}

%license copasi/ArtisticLicense.txt

%{_javadir}/*.jar

%{_javadir}/copasi/

%{_libdir}/copasi/

%endif

%if 0%{?with_octave}

%files -n octave-%{octpkg}

%dir %{octpkgdir}

%{octpkgdir}/packinfo/ArtisticLicense.txt

%{octpkglibdir}/

%endif

%if 0%{?with_perl}

%files -n perl-%{octpkg}

%license copasi/ArtisticLicense.txt

%{perl_vendorarch}/auto/COPASI/

%endif

%if 0%{?with_r}

%files -n R-%{octpkg}

%license copasi/ArtisticLicense.txt

%{_libdir}/R/library/%{octpkg}/

%endif

%if 0%{?with_mono}

%files sharp

%license copasi/ArtisticLicense.txt

%{_prefix}/lib/mono/copasicsP/

%endif

%files doc

%license copasi/ArtisticLicense.txt

%{_datadir}/copasi/doc/

%changelog

* Thu Mar 18 2021 Antonio Trande <sagitter@fedoraproject.org> - 4.30.240-1

- Release 4.30 build-240

* Mon Jan 25 2021 Fedora Release Engineering <releng@fedoraproject.org> - 4.29.228-4

- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild

* Thu Nov 12 2020 Antonio Trande <sagitter@fedoraproject.org> - 4.29.228-3

- Porting to Python-3.10

* Wed Aug 12 2020 Antonio Trande <sagitter@fedoraproject.org> - 4.29.228-2

- Use flexiblas on Fedora 33+

* Wed Aug 12 2020 Antonio Trande <sagitter@fedoraproject.org> - 4.29.228-1

- Release 4.29 build-228

* Mon Jul 27 2020 Fedora Release Engineering <releng@fedoraproject.org> - 4.28.226-4

- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild

* Sat Jul 25 2020 Iñaki Úcar <iucar@fedoraproject.org> - 4.28.226-3

- https://fedoraproject.org/wiki/Changes/FlexiBLAS_as_BLAS/LAPACK_manager

* Wed Jun 24 2020 Antonio Trande <sagitter@fedoraproject.org> - 4.28.226-2

- BuildRequires python-setuptools explicitly

* Mon Jun 15 2020 Antonio Trande <sagitter@fedoraproject.org> - 4.28.226-1

- Release 4.28 build-226

* Tue May 26 2020 Miro Hrončok <mhroncok@redhat.com> - 4.27.217-5

- Rebuilt for Python 3.9

* Fri May 15 2020 Antonio Trande <sagitter@fedoraproject.org> - 4.27.217-4

- Rebuild for zipper-1.0.1/libCombine-0.2.7

* Tue Jan 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 4.27.217-3

- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild

* Sat Dec 14 2019 Richard Shaw <hobbes1069@gmail.com> - 4.27.217-2

- Rebuilt for qt5-qtdatavis3d 5.13.2.

* Sat Sep 14 2019 Antonio Trande <sagitter@fedoraproject.org> - 4.27.217-1

- Release 4.27 build-217

* Mon Aug 19 2019 Miro Hrončok <mhroncok@redhat.com> - 4.25.213-2

- Rebuilt for Python 3.8

* Wed Jul 31 2019 Antonio Trande <sagitter@fedoraproject.org> - 4.25.213-1

- Release 4.25 build-213

- Use standard c++17

- Disable R package

- Disable perl package

* Wed Jun 19 2019 Tim Landscheidt <tim@tim-landscheidt.de> - 4.25.207-6

- Do not list Git-tracked COPASI.rpmlintrc as source

* Tue Jun 18 2019 Orion Poplawski <orion@nwra.com> - 4.25.207-5

- Rebuild for octave 5.1

* Sat Jun 01 2019 Jitka Plesnikova <jplesnik@redhat.com> - 4.25.207-4

- Perl 5.30 rebuild

* Tue May 21 2019 Antonio Trande <sagitter@fedoraproject.org> - 4.25.207-3

- Use Python3 abiflags

* Sun May 05 2019 Antonio Trande <sagitter@fedoraproject.org> - 4.25.207-2

- Rebuild for libsbml-5.18.0

* Sat Mar 16 2019 Antonio Trande <sagitter@fedoraproject.org> - 4.25.207-1

- Release 4.25 build-207

- Use openblas always

- Add crossguid dependency

* Fri Mar 08 2019 Antonio Trande <sagitter@fedoraproject.org> - 4.24.197-8

- Obsolete COPASI-sharp on fedora 30+/pp64* (rhbz#1588734,#1686738)

* Fri Mar 08 2019 Antonio Trande <sagitter@fedoraproject.org> - 4.24.197-7

- Exclude mono builds on fedora 30+/pp64* (rhbz#1588734,#1686738)

* Thu Jan 31 2019 Fedora Release Engineering <releng@fedoraproject.org> - 4.24.197-6

- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild

* Thu Nov 15 2018 Orion Poplawski <orion@cora.nwra.com> - 4.24.197-5

- Rebuild for octave 4.4

* Mon Sep 24 2018 Antonio Trande <sagitter@fedoraproject.org> - 4.24.197-4

- Bundle minizip on fedora 30+ (rhbz#1632172) (upstream bug #466)

* Tue Aug 28 2018 Patrik Novotný 

- change requires to minizip-compat(-devel), rhbz#1609830, rhbz#1615381

* Sun Aug 05 2018 Antonio Trande <sagitter@fedoraproject.org> - 4.24.197-2

- Rebuild for libsbw-2.12.2

* Tue Jul 31 2018 Antonio Trande <sagitter@fedoraproject.org> - 4.24.197-1

- Release 4.24 build-197

- Erase obsolete patches

- Drop Python2 binding

- Disable BUILD_CXX_EXAMPLES

* Thu Jul 12 2018 Fedora Release Engineering <releng@fedoraproject.org> - 4.23.184-15

- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild

* Tue Jul 03 2018 Petr Pisar <ppisar@redhat.com> - 4.23.184-14

- Perl 5.28 rebuild

* Fri Jun 29 2018 Jitka Plesnikova <jplesnik@redhat.com> - 4.23.184-13

- Perl 5.28 rebuild

* Tue Jun 19 2018 Miro Hrončok <mhroncok@redhat.com> - 4.23.184-12

- Rebuilt for Python 3.7

* Wed Jun 06 2018 Antonio Trande <sagitter@fedoraproject.org> - 4.23.184-11

- Rebuild for libsbml-5.17.0

* Mon Jun 04 2018 Antonio Trande <sagitter@fedoraproject.org> - 4.23.184-10

- Patched for Qt-5.11.0 (upstream bugs #2625 #2629)

* Fri Jun 01 2018 Antonio Trande <sagitter@fedoraproject.org> - 4.23.184-9

- Remove directory of examples

* Fri Jun 01 2018 Antonio Trande <sagitter@fedoraproject.org> - 4.23.184-8

- Fix Python interpreter again

- Add COPASI.rpmlintrc

* Thu May 31 2018 Antonio Trande <sagitter@fedoraproject.org> - 4.23.184-7

- Use always Qt5

* Fri May 18 2018 Antonio Trande <sagitter@fedoraproject.org> - 4.23.184-6

- Fix Python interpreter

* Thu May 17 2018 Antonio Trande <sagitter@fedoraproject.org> - 4.23.184-5

- Rebuild with Qt5

* Wed May 16 2018 Tom Callaway <spot@fedoraproject.org> - 4.23.184-4

- rebuild for R 3.5.0

* Sat May 05 2018 Antonio Trande <sagitter@fedoraproject.org> - 4.23.184-3

- Now built with Qt5

- Built against libmml

* Sun Apr 29 2018 Antonio Trande <sagitter@fedoraproject.org> - 4.23.184-2

- Now built with Qt4

- Disable java/octave bindings

* Sun Apr 29 2018 Antonio Trande <sagitter@fedoraproject.org> - 4.23.184-1

- Update to version 4.23 -build 184

- Add libCombine, zipper, minizip dependencies

- Build with Qt5

* Thu Feb 15 2018 Antonio Trande <sagitter@fedoraproject.org> - 4.22.170-7

- Rebuild for libsbml-5.16.0

- Disable Octave binding on ARM ('virtual memory exhausted' issue)

* Wed Feb 07 2018 Fedora Release Engineering <releng@fedoraproject.org> - 4.22.170-6

- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild

* Sun Dec 17 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.22.170-5

- Appdata file moved into metainfo data directory

* Sun Dec 10 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.22.170-4

- Rebuild for libsbml-5.16.0

* Fri Nov 24 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.22.170-3

- Additional screeshots (bz#1517299)

* Fri Nov 24 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.22.170-2

- Appdata file edited (bz#1517299)

* Sat Nov 11 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.22.170-1

- Update to version 4.22 -build 170

- Use OpenBlas

* Thu Oct 12 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.21.166-2

- Remove old Obsoletes

* Tue Oct 10 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.21.166-1

- Update to version 4.21 -build 166

* Fri Sep 22 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.20.165-1

- Update to version 4.20 -build 165

* Tue Sep 05 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.20.159-1

- Update to version 4.20 -build 159

* Wed Aug 16 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.20.158-4

- Fix Python interpreter

* Mon Aug 07 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.20.158-3

- Reintroduce command to disable generation of the debuginfo package on s390x (bz#1478284)

* Tue Aug 01 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.20.158-2

- Make a new conditional macro to control stripping of symbols from object files

* Mon Jul 31 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.20.158-1

- Update to version 4.20 -build 158

- Debuginfo packages built

* Wed Jul 26 2017 Fedora Release Engineering <releng@fedoraproject.org> - 4.19.156-2

- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild

* Tue Jul 11 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.19.156-1

- Update to version 4.19 -build 156

* Sun Jul 02 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.19.155-1

- Update to version 4.19 -build 155 (fix upstream bug #2428)

* Sun Jun 04 2017 Jitka Plesnikova <jplesnik@redhat.com> - 4.19.150-2

- Perl 5.26 rebuild

* Fri Jun 02 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.19.150-1

- Update to version 4.19 -build 150 (fix upstream bug #2415)

* Sat Apr 15 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.19.148-1

- Update to version 4.19 -build 148 (fix upstream bug #2403)

* Fri Apr 14 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.19.147-3

- Rebuild for libsbml-5.15.0

* Thu Apr 06 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.19.147-2

- Override version from headers

- Fix installation of examples and docs

- Fix copasidir option

- Strip executable binary/library files

* Sun Mar 26 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.19.147-1

- Update to version 4.19 -build 147

- Fix Octave binding (upstream bug #2342)

* Sat Mar 04 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.19.146-1

- Update to version 4.19 -build 146

* Fri Feb 10 2017 Fedora Release Engineering <releng@fedoraproject.org> - 4.19.143-2

- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild

* Sat Feb 04 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.19.143-1

- Update to version 4.19 -build 143

* Wed Jan 18 2017 Antonio Trande <sagitter@fedoraproject.org> - 4.19.141-1

- Update to version 4.19 -build 141

* Thu Dec 22 2016 Antonio Trande <sagitter@fedoraproject.org> - 4.18.138-1

- Update to build 138 (bug fixes from upstream)

* Mon Dec 19 2016 Miro Hrončok <mhroncok@redhat.com> - 4.18.136-4

- Rebuild for Python 3.6