|
|
3d0ec26 |
%define _ver_major 4
|
|
Mario Ceresa |
49b5213 |
%define _ver_minor 4
|
|
Mario Ceresa |
49b5213 |
%define _ver_release 0
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%if 0%{?rhel} && 0%{?rhel} <= 5
|
|
|
3d0ec26 |
%{!?python_sitelib: %global python_sitelib %(%{__python} -c "from distutils.sysconfig import get_python_lib; print(get_python_lib())")}
|
|
|
3d0ec26 |
%{!?python_sitearch: %global python_sitearch %(%{__python} -c "from distutils.sysconfig import get_python_lib; print(get_python_lib(1))")}
|
|
|
3d0ec26 |
%endif
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
Name: InsightToolkit
|
|
|
3d0ec26 |
Summary: Insight Toolkit library for medical image processing
|
|
|
3d0ec26 |
Version: %{_ver_major}.%{_ver_minor}.%{_ver_release}
|
|
Mario Ceresa |
534a771 |
Release: 2%{?dist}
|
|
|
3d0ec26 |
License: ASL 2.0
|
|
|
3d0ec26 |
Group: Applications/Engineering
|
|
|
3d0ec26 |
Source0: http://sourceforge.net/projects/itk/files/itk/%{_ver_major}.%{_ver_minor}/%{name}-%{version}.tar.gz
|
|
|
3d0ec26 |
Source1: http://downloads.sourceforge.net/project/itk/itk/2.4/ItkSoftwareGuide-2.4.0.pdf
|
|
|
3d0ec26 |
URL: http://www.itk.org/
|
|
|
3d0ec26 |
Patch0: %{name}-0001-Set-lib-lib64-according-to-the-architecture.patch
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
BuildRequires: cmake
|
|
|
3d0ec26 |
BuildRequires: doxygen
|
|
|
3d0ec26 |
BuildRequires: fftw-devel
|
|
|
3d0ec26 |
BuildRequires: gdcm-devel
|
|
|
3d0ec26 |
BuildRequires: gccxml
|
|
|
3d0ec26 |
BuildRequires: hdf5-devel
|
|
|
3d0ec26 |
BuildRequires: libjpeg-devel
|
|
|
3d0ec26 |
BuildRequires: libxml2-devel
|
|
|
3d0ec26 |
BuildRequires: libpng-devel
|
|
|
3d0ec26 |
BuildRequires: libtiff-devel
|
|
|
3d0ec26 |
BuildRequires: libjpeg-devel
|
|
|
3d0ec26 |
BuildRequires: graphviz
|
|
|
3d0ec26 |
BuildRequires: python2-devel
|
|
|
3d0ec26 |
BuildRequires: vxl-devel
|
|
|
3d0ec26 |
BuildRequires: zlib-devel
|
|
Mario Ceresa |
49b5213 |
BuildRequires: vtk-devel
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%description
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
ITK is an open-source software toolkit for performing registration and
|
|
|
3d0ec26 |
segmentation. Segmentation is the process of identifying and classifying data
|
|
|
3d0ec26 |
found in a digitally sampled representation. Typically the sampled
|
|
|
3d0ec26 |
representation is an image acquired from such medical instrumentation as CT or
|
|
|
3d0ec26 |
MRI scanners. Registration is the task of aligning or developing
|
|
|
3d0ec26 |
correspondences between data. For example, in the medical environment, a CT
|
|
|
3d0ec26 |
scan may be aligned with a MRI scan in order to combine the information
|
|
|
3d0ec26 |
contained in both.
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
ITK is implemented in C++ and its implementation style is referred to as
|
|
|
3d0ec26 |
generic programming (i.e.,using templated code). Such C++ templating means
|
|
|
3d0ec26 |
that the code is highly efficient, and that many software problems are
|
|
|
3d0ec26 |
discovered at compile-time, rather than at run-time during program execution.
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%package devel
|
|
|
3d0ec26 |
Summary: Insight Toolkit
|
|
|
3d0ec26 |
Group: Development/Libraries
|
|
|
3d0ec26 |
Requires: %{name}%{?_isa} = %{version}-%{release}
|
|
Mario Ceresa |
534a771 |
Requires: vtk-devel%{?_isa}
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%description devel
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%{summary}.
|
|
|
3d0ec26 |
Install this if you want to develop applications that use ITK.
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%package examples
|
|
|
3d0ec26 |
Summary: C++, Tcl and Python example programs/scripts for ITK
|
|
|
3d0ec26 |
Group: Development/Languages
|
|
|
3d0ec26 |
Requires: %{name}%{?_isa} = %{version}-%{release}
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%description examples
|
|
|
3d0ec26 |
ITK examples
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%package doc
|
|
|
3d0ec26 |
Summary: Documentation for ITK
|
|
|
3d0ec26 |
Group: Documentation
|
|
|
3d0ec26 |
BuildArch: noarch
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%description doc
|
|
|
3d0ec26 |
%{summary}.
|
|
|
3d0ec26 |
This package contains additional documentation.
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
# Hit bug http://www.gccxml.org/Bug/view.php?id=13372
|
|
|
3d0ec26 |
# We agreed with Mattias Ellert to postpone the bindings till
|
|
|
3d0ec26 |
# next gccxml update.
|
|
|
3d0ec26 |
#%package python
|
|
|
3d0ec26 |
#Summary: Documentation for ITK
|
|
|
3d0ec26 |
#Group: Documentation
|
|
|
3d0ec26 |
#BuildArch: noarch
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
#%description python
|
|
|
3d0ec26 |
#%{summary}.
|
|
|
3d0ec26 |
#This package contains python bindings for ITK.
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%prep
|
|
|
3d0ec26 |
%setup -q
|
|
|
3d0ec26 |
%patch0 -p1
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
# copy guide into the appropriate directory
|
|
|
3d0ec26 |
cp -a %{SOURCE1} .
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
# remove applications: they are shipped separately now
|
|
|
3d0ec26 |
rm -rf Applications/
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%build
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
mkdir -p %{_target_platform}
|
|
|
3d0ec26 |
pushd %{_target_platform}
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%cmake .. \
|
|
|
3d0ec26 |
-DBUILD_SHARED_LIBS:BOOL=ON \
|
|
|
3d0ec26 |
-DBUILD_EXAMPLES:BOOL=ON \
|
|
|
3d0ec26 |
-DCMAKE_BUILD_TYPE:STRING="RelWithDebInfo"\
|
|
|
3d0ec26 |
-DCMAKE_VERBOSE_MAKEFILE=ON\
|
|
|
3d0ec26 |
-DBUILD_TESTING=ON\
|
|
|
3d0ec26 |
-DITKV3_COMPATIBILITY:BOOL=ON \
|
|
|
3d0ec26 |
-DITK_BUILD_ALL_MODULES:BOOL=ON \
|
|
Mario Ceresa |
49b5213 |
-DModule_ITKVtkGlue:BOOL=ON \
|
|
|
3d0ec26 |
-DITK_WRAP_PYTHON:BOOL=OFF \
|
|
|
3d0ec26 |
-DITK_WRAP_JAVA:BOOL=OFF \
|
|
|
3d0ec26 |
-DBUILD_DOCUMENTATION:BOOL=OFF \
|
|
|
3d0ec26 |
-DITK_USE_REVIEW:BOOL=ON \
|
|
|
3d0ec26 |
-DITK_USE_SYSTEM_HDF5=ON \
|
|
|
3d0ec26 |
-DITK_USE_SYSTEM_JPEG=ON \
|
|
|
3d0ec26 |
-DITK_USE_SYSTEM_TIFF=ON \
|
|
|
3d0ec26 |
-DITK_USE_SYSTEM_PNG=ON \
|
|
|
3d0ec26 |
-DITK_USE_SYSTEM_ZLIB=ON \
|
|
|
3d0ec26 |
-DITK_USE_SYSTEM_GDCM=ON \
|
|
|
3d0ec26 |
-DITK_USE_SYSTEM_VXL=ON \
|
|
|
3d0ec26 |
-DITK_USE_SYSTEM_SWIG=ON \
|
|
|
3d0ec26 |
-DITK_USE_SYSTEM_GCCXML=ON \
|
|
|
d9204f3 |
-DITK_INSTALL_LIBRARY_DIR=%{_lib}/ \
|
|
|
3d0ec26 |
-DITK_INSTALL_INCLUDE_DIR=include/%{name} \
|
|
|
3d0ec26 |
-DITK_INSTALL_PACKAGE_DIR=%{_lib}/cmake/%{name}/ \
|
|
|
3d0ec26 |
-DITK_INSTALL_RUNTIME_DIR:PATH=%{_bindir} \
|
|
|
3d0ec26 |
-DCMAKE_CXX_FLAGS:STRING="-fpermissive"
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
popd
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
make %{?_smp_mflags} -C %{_target_platform}
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%install
|
|
|
3d0ec26 |
%make_install -C %{_target_platform}
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
# Install examples
|
|
|
3d0ec26 |
mkdir -p %{buildroot}%{_datadir}/%{name}/examples
|
|
|
3d0ec26 |
cp -ar Examples/* %{buildroot}%{_datadir}/%{name}/examples/
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%check
|
|
|
3d0ec26 |
# There are a couple of tests randomly failing on f19 and rawhide and I'm debugging
|
|
|
3d0ec26 |
# it with upstream. Making the tests informative for now
|
|
|
3d0ec26 |
make test -C %{_target_platform} || exit 0
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%post -p /sbin/ldconfig
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%postun -p /sbin/ldconfig
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%files
|
|
|
3d0ec26 |
%dir %{_datadir}/%{name}
|
|
|
d9204f3 |
%{_libdir}/*.so.*
|
|
|
d9204f3 |
%{_bindir}/itkTestDriver
|
|
|
3d0ec26 |
%doc LICENSE README.txt NOTICE
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%files devel
|
|
|
d9204f3 |
%{_libdir}/*.so
|
|
|
3d0ec26 |
%{_libdir}/cmake/%{name}/
|
|
|
3d0ec26 |
%{_includedir}/%{name}/
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%files examples
|
|
|
3d0ec26 |
%{_datadir}/%{name}/examples
|
|
|
d9204f3 |
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%files doc
|
|
|
3d0ec26 |
%{_docdir}/%{name}-%{version}/
|
|
|
3d0ec26 |
%{_docdir}/ITK-%{_ver_major}.%{_ver_minor}/
|
|
|
3d0ec26 |
%doc ItkSoftwareGuide-2.4.0.pdf
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
%changelog
|
|
Mario Ceresa |
534a771 |
* Wed Jul 10 2013 Mario Ceresa mrceresa fedoraproject org 4.4.0-2
|
|
Mario Ceresa |
534a771 |
- Devel package now requires vtk-devel because it is build with itkvtkglue mod
|
|
Mario Ceresa |
534a771 |
- Minor cleanups
|
|
Mario Ceresa |
534a771 |
|
|
Mario Ceresa |
534a771 |
* Mon Jul 08 2013 Mario Ceresa mrceresa fedoraproject org 4.4.0-1
|
|
Mario Ceresa |
49b5213 |
- Contributed by Sebastian Pölsterl <sebp@k-d-w.org>
|
|
Mario Ceresa |
49b5213 |
- Updated to upstream version 4.4.0
|
|
Mario Ceresa |
49b5213 |
- Add VTK Glue module
|
|
Mario Ceresa |
49b5213 |
- Removed obsolete TIFF patch
|
|
Mario Ceresa |
49b5213 |
|
|
|
9c7f19c |
* Thu May 16 2013 Orion Poplawski <orion@cora.nwra.com> - 4.3.1-12
|
|
|
9c7f19c |
- Rebuild for hdf5 1.8.11
|
|
|
9c7f19c |
|
|
|
1724078 |
* Fri May 2 2013 Mario Ceresa mrceresa fedoraproject org InsightToolkit 4.3.1-11
|
|
Mario Ceresa |
534a771 |
- Rebuilt for gdcm 2.3.2
|
|
|
1724078 |
|
|
|
d9204f3 |
* Fri Apr 26 2013 Mario Ceresa mrceresa fedoraproject org InsightToolkit 4.3.1-10
|
|
|
d9204f3 |
- Install itkTestDriver in default package
|
|
|
d9204f3 |
- Install libraries into _libdir and drop ldconfig file
|
|
|
d9204f3 |
|
|
|
3d0ec26 |
* Tue Apr 23 2013 Mario Ceresa mrceresa fedoraproject org InsightToolkit 4.3.1-9
|
|
|
3d0ec26 |
- Changed license to ASL 2.0
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Mon Apr 22 2013 Mario Ceresa mrceresa fedoraproject org InsightToolkit 4.3.1-8
|
|
|
3d0ec26 |
- Build examples
|
|
|
3d0ec26 |
- Making tests informative as we debug it with upstream
|
|
|
3d0ec26 |
- Fixed cmake support file location
|
|
|
3d0ec26 |
- Disabled python bindings for now, hit http://www.gccxml.org/Bug/view.php?id=13372
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Sat Apr 20 2013 Mario Ceresa mrceresa fedoraproject org InsightToolkit 4.3.1-7
|
|
|
3d0ec26 |
- Enabled v3.20 compatibility layer
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Thu Apr 18 2013 Mario Ceresa mrceresa fedoraproject org InsightToolkit 4.3.1-6
|
|
|
3d0ec26 |
- Removed unused patches
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Mon Apr 08 2013 Mario Ceresa mrceresa fedoraproject org InsightToolkit 4.3.1-5
|
|
|
3d0ec26 |
- Fixed failing tests
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Wed Apr 03 2013 Mario Ceresa mrceresa fedoraproject org InsightToolkit 4.3.1-4
|
|
|
3d0ec26 |
- Fixed build with USE_SYSTEM_TIFF
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Fri Mar 29 2013 Mario Ceresa mrceresa fedoraproject org InsightToolkit 4.3.1-3
|
|
|
3d0ec26 |
- Compiles against VXL with compatibility patches
|
|
|
3d0ec26 |
- Enabled testing
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Tue Feb 12 2013 Mario Ceresa mrceresa fedoraproject org InsightToolkit 4.3.1-2
|
|
|
3d0ec26 |
- Reorganized sections
|
|
|
3d0ec26 |
- Fixed patch naming
|
|
|
3d0ec26 |
- Removed buildroot and rm in install section
|
|
|
3d0ec26 |
- Removed cmake version constraint
|
|
|
3d0ec26 |
- Changed BR libjpeg-turbo-devel to libjpeg-devel
|
|
|
3d0ec26 |
- Preserve timestamp of SOURCE1 file.
|
|
|
3d0ec26 |
- Fixed main file section
|
|
|
3d0ec26 |
- Added noreplace
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Fri Jan 25 2013 Mario Ceresa mrceresa fedoraproject org InsightToolkit 4.3.1-1
|
|
|
3d0ec26 |
- Updated to 4.3.1
|
|
|
3d0ec26 |
- Fixed conflicts with previous patches
|
|
|
3d0ec26 |
- Dropped gcc from BR
|
|
|
3d0ec26 |
- Fixed tabs-vs-space
|
|
|
3d0ec26 |
- Improved description
|
|
|
3d0ec26 |
- Re-enabled system tiff
|
|
|
3d0ec26 |
- Clean up the spec
|
|
|
3d0ec26 |
- Sanitize use of dir macro
|
|
|
3d0ec26 |
- Re-organized docs
|
|
|
3d0ec26 |
- Fixed libdir and datadir ownership
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Wed Dec 12 2012 Mario Ceresa mrceresa fedoraproject org InsightToolkit 4.2.1-4
|
|
|
3d0ec26 |
- Included improvements to the spec file from Dan Vratil
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Tue Dec 4 2012 Mario Ceresa mrceresa fedoraproject org InsightToolkit 4.2.1-3
|
|
|
3d0ec26 |
- Build against system VXL
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Mon Nov 26 2012 Mario Ceresa mrceresa fedoraproject org InsightToolkit 4.2.1-2
|
|
|
3d0ec26 |
- Reorganized install paths
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Tue Nov 20 2012 Mario Ceresa mrceresa fedoraproject org InsightToolkit 4.2.1-1
|
|
|
3d0ec26 |
- Updated to new version
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Wed Nov 30 2011 Mario Ceresa mrceresa fedoraproject org InsightToolkit 3.20.1-1
|
|
|
3d0ec26 |
- Updated to new version
|
|
|
3d0ec26 |
- Added binary morphology code
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Fri May 27 2011 Mario Ceresa mrceresa fedoraproject org InsightToolkit 3.20.0-5
|
|
|
3d0ec26 |
- Added cstddef patch for gcc 4.6
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Mon Jan 24 2011 Mario Ceresa mrceresa@gmail.com InsightToolkit 3.20.0-4
|
|
|
3d0ec26 |
- Added the ld.so.conf file
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Mon Nov 22 2010 Mario Ceresa mrceresa@gmail.com InsightToolkit 3.20.0-3
|
|
|
3d0ec26 |
- Updated to 3.20 release
|
|
|
3d0ec26 |
- Added vxl utility and review material
|
|
|
3d0ec26 |
- Applied patch from upstream to fix vtk detection (Thanks to Mathieu Malaterre)
|
|
|
3d0ec26 |
- Added patch to install in the proper lib dir based on arch value
|
|
|
3d0ec26 |
- Added patch to set datadir as cmake configuration files dir
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Sun Dec 6 2009 Mario Ceresa mrceresa@gmail.com InsightToolkit 3.16.0-2
|
|
|
3d0ec26 |
- Fixed comments from revision: https://bugzilla.redhat.com/show_bug.cgi?id=539387#c8
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
* Tue Nov 17 2009 Mario Ceresa mrceresa@gmail.com InsightToolkit 3.16.0-1
|
|
|
3d0ec26 |
- Initial RPM Release
|
|
|
3d0ec26 |
|
|
|
3d0ec26 |
|