%global packname  XVector

%global rlibdir %{_libdir}/R/library

%global __suggests_exclude ^R\\((drosophila2probe)\\)

Name:             R-%{packname}

Version:          0.36.0

Release:          3%{dist}

Summary:          Representation and manipulation of external sequences

License:          Artistic 2.0

URL:              http://www.bioconductor.org/packages/release/bioc/html/XVector.html

Source0:          http://www.bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz

BuildRequires:    R-devel >= 4.0.0 tex(latex) R-methods R-IRanges-devel >= 2.23.9

BuildRequires:    R-BiocGenerics >= 0.37.0 R-S4Vectors-devel >= 0.27.12 R-utils R-tools

%description

Memory efficient S4 classes for storing sequences "externally" (behind an R

external pointer, or on disk).

%package devel

Summary:          Development files for R-XVector

Requires:         %{name}%{?_isa} = %{version}-%{release}

%description devel

Development files for R-XVector.

%prep

%setup -q -c -n %{packname}

sed -i '/importFrom(zlibbioc)/d' XVector/NAMESPACE

sed -i '/import(zlibbioc)/d' XVector/NAMESPACE

sed -i -e 's/zlibbioc, //' XVector/DESCRIPTION

%build

%install

mkdir -p %{buildroot}%{rlibdir}

R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}

test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)

rm -f %{buildroot}%{rlibdir}/R.css

%check

# Testing tests optional deps we don't package

# _R_CHECK_FORCE_SUGGESTS_=false %%{_bindir}/R CMD check %%{packname}

%files

%dir %{rlibdir}/%{packname}/

%doc %{rlibdir}/%{packname}/html/

%{rlibdir}/%{packname}/DESCRIPTION

%{rlibdir}/%{packname}/INDEX

%{rlibdir}/%{packname}/NAMESPACE

%{rlibdir}/%{packname}/Meta/

%{rlibdir}/%{packname}/R/

%{rlibdir}/%{packname}/help/

%{rlibdir}/%{packname}/unitTests/

%{rlibdir}/%{packname}/libs/

%files devel

%{rlibdir}/%{packname}/include/

%changelog

* Fri Apr 21 2023 Iñaki Úcar <iucar@fedoraproject.org> - 0.36.0-3

- R-maint-sig mass rebuild

* Wed Jan 18 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.36.0-2

- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild

* Sat Sep  3 2022 Tom Callaway <spot@fedoraproject.org> - 0.36.0-1

- update to 0.36.0

- rebuild for R 4.2.1

* Wed Jul 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.32.0-4

- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild

* Wed Jan 19 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.32.0-3

- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild

* Wed Jul 21 2021 Fedora Release Engineering <releng@fedoraproject.org> - 0.32.0-2

- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild

* Wed Jun 16 2021 Tom Callaway <spot@fedoraproject.org> - 0.32.0-1

- update to 0.32.0

- Rebuilt for R 4.1.0

* Wed Feb  3 2021 Tom Callaway <spot@fedoraproject.org> - 0.30.0-1

- update to 0.30.0

* Mon Jan 25 2021 Fedora Release Engineering <releng@fedoraproject.org> - 0.28.0-3

- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild

* Mon Jul 27 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.28.0-2

- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild

* Mon Jun  8 2020 Tom Callaway <spot@fedoraproject.org> - 0.28.0-1

- rebuild for R 4

- update to 0.28.0

* Tue Jan 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.26.0-3

- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild

* Thu Nov 21 2019 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 0.26.0-2

- Exclude Suggests for unavailable packages

* Wed Nov  6 2019 Tom Callaway <spot@fedoraproject.org> - 0.26.0-1

- update to 0.26.0

* Mon Aug 12 2019 Elliott Sales de Andrade <quantum.analyst@gmail.com> - 0.24.0-2

- Remove explicit dependencies provided by automatic dependency generator

* Wed Jul 31 2019 Tom Callaway <spot@fedoraproject.org> - 0.24.0-1

- update to 0.24.0

* Wed Jul 24 2019 Fedora Release Engineering <releng@fedoraproject.org> - 0.20.0-4

- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild

* Thu Jan 31 2019 Fedora Release Engineering <releng@fedoraproject.org> - 0.20.0-3

- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild

* Thu Jul 12 2018 Fedora Release Engineering <releng@fedoraproject.org> - 0.20.0-2

- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild

* Wed May 16 2018 Tom Callaway <spot@fedoraproject.org> - 0.20.0-1

- update to 0.20.0, rebuild for R 3.5.0

* Fri Mar 23 2018 Tom Callaway <spot@fedoraproject.org> - 0.18.0-1

- update to 0.18.0

* Wed Feb 07 2018 Fedora Release Engineering <releng@fedoraproject.org> - 0.16.0-4

- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild

* Wed Aug 02 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.16.0-3

- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild

* Wed Jul 26 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.16.0-2

- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild

* Wed May 24 2017 Tom Callaway <spot@fedoraproject.org> 0.16.0-1

- update to 0.16.0

* Fri Feb 10 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.10.0-3

- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild

* Wed Feb 03 2016 Fedora Release Engineering <releng@fedoraproject.org> - 0.10.0-2

- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild

* Mon Dec  7 2015 Tom Callaway <spot@fedoraproject.org> - 0.10.0-1

- update to 0.10.0

* Tue Jun 16 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.8.0-2

- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild

* Fri May 29 2015 Tom Callaway <spot@fedoraproject.org> - 0.8.0-1

- update to 0.8.0

- fix DESCRIPTION to not be doc

* Fri Aug 15 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.4.0-2

- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild

* Mon Jun  9 2014 Tom Callaway <spot@fedoraproject.org> - 0.4.0-1

- update to 0.4.0

* Fri Jun 06 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.2.0-2

- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild

* Fri Jan 24 2014 Tom Callaway <spot@fedoraproject.org> - 0.2.0-1

- initial package