Name: bwa Version: 0.7.15 Release: 7%{?dist} Summary: Burrows-Wheeler Alignment tool Group: Applications/Engineering License: GPLv3 URL: http://bio-bwa.sourceforge.net/ Source0: http://downloads.sourceforge.net/bio-%{name}/%{name}-%{version}.tar.bz2 # 0.7.x versions only build on x86_64 ExclusiveArch: x86_64 BuildRequires: gcc BuildRequires: perl-generators BuildRequires: zlib-devel %description BWA is a program for aligning sequencing reads against a large reference genome (e.g. human genome). It has two major components, one for read shorter than 150bp and the other for longer reads. %prep %setup -q %build make %{?_smp_mflags} CFLAGS="%{optflags}" %install rm -rf %{buildroot} mkdir -p %{buildroot}/%{_bindir} mkdir -p %{buildroot}/%{_mandir}/man1 install -m 0755 bwa %{buildroot}/%{_bindir} install -m 0755 qualfa2fq.pl %{buildroot}/%{_bindir} install -m 0755 xa2multi.pl %{buildroot}/%{_bindir} install -m 0755 bwakit/* %{buildroot}/%{_bindir} install -m 0644 bwa.1 %{buildroot}/%{_mandir}/man1/bwa.1 %files %doc COPYING NEWS.md README.md README-alt.md %{_mandir}/man1/%{name}.1* %{_bindir}/* %changelog * Sat Jul 21 2018 Adam Huffman - 0.7.15-7 - Add BR for gcc * Thu Jul 12 2018 Fedora Release Engineering - 0.7.15-6 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Wed Feb 07 2018 Fedora Release Engineering - 0.7.15-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild * Wed Aug 02 2017 Fedora Release Engineering - 0.7.15-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild * Wed Jul 26 2017 Fedora Release Engineering - 0.7.15-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild * Fri Feb 10 2017 Fedora Release Engineering - 0.7.15-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild * Thu Jun 02 2016 Adam Huffman - 0.7.15-1 - Update to upstream release 0.7.15 * Thu Mar 24 2016 Adam Huffman - 0.7.13-1 - Update to upstream release 0.7.13 * Wed Feb 03 2016 Fedora Release Engineering - 0.7.12-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild * Wed Jun 17 2015 Fedora Release Engineering - 0.7.12-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild * Sat Jan 03 2015 Adam Huffman - 0.7.12-1 - Update to upstream 0.7.12 * Sat Dec 27 2014 Adam Huffman - 0.7.11-1 - Update to upstream 0.7.11 - First attempt to include new bwakit packaging * Fri Aug 15 2014 Fedora Release Engineering - 0.7.10-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild * Sun Jul 20 2014 Adam Huffman - 0.7.10-1 - Update to upstream 0.7.10 * Sat Jun 07 2014 Fedora Release Engineering - 0.7.9a-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild * Thu May 29 2014 Adam Huffman - 0.7.9a-1 - Update to upstream 0.7.9a - Docs now in Markdown format, including new README.md * Sun Oct 27 2013 Adam Huffman - 0.7.5a-2 - Remove nosse2 patch because 0.7+ versions only build on x86_64 * Sat Oct 26 2013 Adam Huffman - 0.7.5a-1 - Update to upstream 0.7.5a * Sat Aug 03 2013 Fedora Release Engineering - 0.6.1-7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild * Thu Jul 18 2013 Petr Pisar - 0.6.1-6 - Perl 5.18 rebuild * Wed Feb 13 2013 Fedora Release Engineering - 0.6.1-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild * Wed Jul 18 2012 Fedora Release Engineering - 0.6.1-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild * Mon May 28 2012 Dan Horák - 0.6.1-3 - enable SSE2 on x86_64 only, fixes build on secondary arches * Sun May 13 2012 Adam Huffman - 0.6.1-2 - add patch to avoid SSE2 on i386 * Wed Jan 11 2012 Adam Huffman - 0.6.1-1 - update to 0.6.1 * Thu Feb 17 2011 Adam Huffman - 0.5.9-1 - new upstream release 0.5.9 * Tue Feb 08 2011 Fedora Release Engineering - Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild * Wed Jan 5 2011 Adam Huffman - 0.5.8c-1 - upstream bugfix release * Tue Jul 20 2010 Adam Huffman - 0.5.8a-1 - new upstream release * Sat May 29 2010 Adam Huffman - 0.5.7-2 - fix source URL - install manpage - fix cflags * Fri May 28 2010 Adam Huffman - 0.5.7-1 - initial version