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Name:           elph
Version:        1.0.1
Release:        30%{?dist}
Summary:        Tool to find motifs in a set of DNA or protein sequences

License:        Artistic clarified
URL:            http://www.cbcb.umd.edu/software/ELPH/
Source0:        ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-1.0.1.tar.gz
Patch0:         %{name}-chris.patch
BuildRequires:  gcc-c++
BuildRequires: make

%description
ELPH is a general-purpose Gibbs sampler for finding motifs in a set of
DNA or protein sequences. The program takes as input a set containing
anywhere from a few dozen to thousands of sequences, and searches
through them for the most common motif, assuming that each sequence
contains one copy of the motif.


%prep
%setup -q -n ELPH
%patch0 -p 1 -b .chris


%build
make -C sources %{?_smp_mflags} \
  CFLAGS="$RPM_OPT_FLAGS -fno-exceptions -fno-rtti -D_REENTRANT"


%check


%install
rm -rf $RPM_BUILD_ROOT
mkdir -p $RPM_BUILD_ROOT%{_bindir}
install -m 755 sources/elph $RPM_BUILD_ROOT/%{_bindir}



%files
%doc COPYRIGHT LICENSE README Readme.ELPH VERSION
%{_bindir}/elph


%changelog
* Thu Jan 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-30
- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild

* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-29
- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild

* Thu Jan 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-28
- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild

* Wed Jul 21 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-27
- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild

* Tue Jan 26 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-26
- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild

* Mon Jul 27 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-25
- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild

* Tue Jan 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-24
- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild

* Wed Jul 24 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-23
- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild

* Thu Jan 31 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-22
- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild

* Mon Jul 23 2018 Christian Iseli <Christian.Iseli@unil.ch> - 1.0.1-21
- Fix FTBFS due to missing BuildRequires gcc-c++ (bz 1603873)

* Thu Jul 12 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-21
- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild

* Wed Feb 07 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-20
- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild

* Wed Aug 02 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-19
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild

* Wed Jul 26 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-18
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild

* Fri Feb 10 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-17
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild

* Wed Feb 03 2016 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-16
- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild

* Wed Jun 17 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-15
- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild

* Sat May 02 2015 Kalev Lember <kalevlember@gmail.com> - 1.0.1-14
- Rebuilt for GCC 5 C++11 ABI change

* Sat Aug 16 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-13
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild

* Sat Jun 07 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-12
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild

* Sat Aug 03 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-11
- Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild

* Wed Feb 13 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-10
- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild

* Wed Jul 18 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-9
- Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild

* Fri Jan 13 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-8
- Rebuilt for https://fedoraproject.org/wiki/Fedora_17_Mass_Rebuild

* Tue Feb 08 2011 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-7
- Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild

* Fri Jul 24 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-6
- Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild

* Tue Feb 24 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-5
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild

* Mon Feb 23 2009 Christian Iseli <Christian.Iseli@licr.org> - 1.0.1-4
- Rebuild for F-11

* Mon Feb 18 2008 Fedora Release Engineering <rel-eng@fedoraproject.org> - 1.0.1-3
- Autorebuild for GCC 4.3

* Wed Aug 22 2007 Christian Iseli <Christian.Iseli@licr.org> 1.0.1-2
 - Fix License tag.

* Thu Feb 22 2007 Christian Iseli <Christian.Iseli@licr.org> 1.0.1-1
 - Import in Fedora devel.

* Fri Feb  9 2007 Christian Iseli <Christian.Iseli@licr.org> 1.0.1-0
 - Create spec file.