##Documents generation and Octave binding look not available yet

%global with_python2 1

%global with_python3 1

%global with_ruby    0

%ifarch s390x %{arm} aarch64 %{power64}

%global with_java    0

%else

%global with_java    1

%endif

%global with_octave  0

%global with_perl    0

%global with_r       0

%ifarch %{mono_arches}

%global with_mono    0

%else

%global with_mono    0

%endif

%global with_doc     1

# No tests

%global with_check   0

%global octpkg NUML

%if 0%{?with_octave}

# Exclude .oct files from provides

%global __provides_exclude_from ^%{octpkglibdir}/.*\\.oct$

%endif

%global _docdir_fmt %{name}

Name:           libnuml

Summary:        Numerical Markup Language

Version:        1.1.1

Release:        10%{?dist}

URL:            https://github.com/NuML/NuML

Source0:        https://github.com/NuML/NuML/releases/download/v%{version}/libNUML-%{version}-Source.tar.gz

License:        LGPLv2+

BuildRequires: cmake

BuildRequires: gcc, gcc-c++

BuildRequires: zlib-devel

BuildRequires: swig

BuildRequires: libsbml-devel

BuildRequires: libxml2-devel

BuildRequires: bzip2-devel

BuildRequires: xerces-c-devel

BuildRequires: minizip-devel

%if 0%{?with_check}

BuildRequires: check-devel

%endif

##This patch BuildRequires:  cmakesets libraries' installation paths

Patch0: %{name}-fix_install_libpaths.patch

%description

LibNuML is a library for reading/writing documents describing numerical

results in an XML dialect.

This release includes a number of improvements especially:

 * improved object structure matching the specification document

 * ability to add notes and annotations

 * improved python support

%package devel

Summary: Library that fully supports NUML

Requires: %{name}%{?_isa} = %{version}-%{release}

%description devel

This package provides header and library files of libnuml.

%package static

Summary: Library that fully supports NUML

Provides: %{name}-static = %{version}-%{release}

%description static

This package provides static library of libnuml.

%if 0%{?with_python2}

%package -n python2-libnuml

Summary: Python2 library that fully supports NUML

BuildRequires: python2-devel

%{?python_provide:%python_provide python2-%{name}}

%description -n python2-libnuml

The %{octpkg} python package contains the libraries to 

develop applications with libNUML Python2 bindings.

%endif

%if 0%{?with_python3}

%package -n python3-libnuml

Summary: Python3 library that fully supports NUML

BuildRequires: python3-devel

%{?python_provide:%python_provide python3-%{name}}

%description -n python3-libnuml

The %{octpkg} python package contains the libraries to 

develop applications with libNUML Python3 bindings.

%endif

%if 0%{?with_java}

%package -n java-%{octpkg}

Summary: Java library that fully supports NUML

BuildRequires:  java-1.8.0-openjdk-devel

BuildRequires:  java-devel, javapackages-tools

Requires:       java-headless

Requires:       jpackage-utils

%description -n java-%{octpkg}

The %{octpkg} java package contains the libraries to 

develop applications with libNUML Java bindings.

%endif

%if 0%{?with_octave}

%package -n octave-%{octpkg}

Summary: Octave library that fully supports NUML

BuildRequires:  octave-devel

Requires:       octave(api) = %{octave_api}

Requires(post): octave

Requires(postun): octave

%description -n octave-%{octpkg}

The %{octpkg} octave package contains the libraries to 

develop applications with libNUML Octave bindings.

%endif

%if 0%{?with_perl}

%package -n perl-%{octpkg}

Summary: Perl library that fully supports NUML

BuildRequires: perl-interpreter

BuildRequires: perl-devel

BuildRequires: perl-generators

BuildRequires: perl(ExtUtils::MakeMaker)

BuildRequires: perl(Test::More)

Requires:      perl(:MODULE_COMPAT_%(eval "`perl -V:version`"; echo $version))

%description -n perl-%{octpkg}

The %{octpkg} perl package contains the libraries to 

develop applications with libNUML Perl bindings.

%endif

%if 0%{?with_ruby}

%package -n ruby-%{octpkg}

Summary: Ruby library that fully supports NUML

BuildRequires: ruby-devel

Requires: ruby(release)

Provides: ruby(NUML) = %{version}

%description -n ruby-%{octpkg}

The %{octpkg} ruby package contains the libraries to 

develop applications with libNUML Ruby bindings.

%endif

%if 0%{?with_r}

%package -n R-%{octpkg}

Summary: R library that fully supports NUML

BuildRequires: R-devel, R-core-devel, tex(latex)

Requires:      R-core

%description -n R-%{octpkg}

The %{octpkg} R package contains the libraries to 

develop applications with libNUML R bindings.

%endif

%if 0%{?with_mono}

%package sharp

Summary: Mono library that fully supports NUML

BuildRequires: xerces-c-devel, libxml2-devel, expat-devel

BuildRequires: mono-core

Requires: mono-core

%description sharp

The %{octpkg} csharp package contains the libraries to 

develop applications with libNUML C# bindings.

%endif

%if 0%{?with_doc}

%package doc

Summary: Library that fully supports NUML

BuildRequires: doxygen

BuildArch: noarch

%description doc

The %{octpkg} doc package contains the HTML documentation

of libNUML libraries.

%endif

%prep

%setup -n libNUML-%{version}-Source -q

%patch0

sed -e 's| lib | %{_lib} |g' -i CMakeLists.txt

sed -e 's| lib/cmake | %{_lib}/cmake |g' -i CMakeLists.txt

%build

%if 0%{?with_python3}

mkdir build2 && pushd build2

%cmake -Wno-dev \

 -DWITH_PYTHON:BOOL=ON \

 -DWITH_SWIG:BOOL=ON \

 -DPYTHON_EXECUTABLE:FILEPATH=%{__python3} \

 -DPYTHON_INCLUDE_DIR:PATH=%{_includedir}/python%{python3_version}m \

 -DPYTHON_LIBRARY:FILEPATH=%{_libdir}/libpython%{python3_version}m.so \

%if 0%{?with_java}

 -DWITH_JAVA:BOOL=OFF \

 -DWITH_SWIG:BOOL=OFF \

%endif

%if 0%{?with_octave}

 -DWITH_OCTAVE:BOOL=OFF \

%endif

%if 0%{?with_perl}

 -DWITH_PERL:BOOL=OFF \

%endif

%if 0%{?with_ruby}

 -DWITH_RUBY:BOOL=OFF \

%endif

%if 0%{?with_r}

 -DWITH_R:BOOL=OFF \

 -DR_INCLUDE_DIRS:PATH=%{_includedir}/R \

%endif

%if 0%{?with_mono}

 -DWITH_CSHARP:BOOL=OFF \

 -DWITH_SWIG:BOOL=OFF \

%endif

 -DCSHARP_COMPILER:FILEPATH=%{_bindir}/mcs \

%if 0%{?with_doc}

 -DWITH_DOXYGEN:BOOL=OFF \

%endif

%if 0%{?with_check}

 -DWITH_CHECK:BOOL=ON \

 -DWITH_EXAMPLES:BOOL=ON \

%endif

 -DLIBSBML_LIBRARY:FILEPATH=%{_libdir}/libsbml.so -DLIBSBML_INCLUDE_DIR:PATH=%{_includedir} \

 -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=%{_libdir} \

 -DCMAKE_INSTALL_PREFIX:PATH=%{_prefix} -DLIBNUML_SHARED_VERSION:BOOL=ON \

 -DEXTRA_LIBS:STRING="sbml;xml2;bz2;z;m;dl" -DLIBSBML_STATIC:BOOL=OFF \

 -DCMAKE_CXX_FLAGS_RELEASE:STRING="-I%{_includedir}/libxml2" \

 -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON \

 -DCPACK_BINARY_TZ:BOOL=OFF -DCPACK_BINARY_TGZ:BOOL=OFF \

 -DCPACK_SOURCE_TBZ2:BOOL=OFF -DCPACK_SOURCE_TGZ:BOOL=OFF \

 -DCPACK_SOURCE_TZ:BOOL=OFF -DWITH_ZLIB:BOOL=ON -DWITH_CPP_NAMESPACE:BOOL=OFF \

 -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES ..

%make_build

popd

%endif

######################################################################################################

## ----> Move to build directory ##

mkdir build && pushd build

%cmake -Wno-dev \

%if 0%{?with_python2}

 -DWITH_PYTHON:BOOL=ON \

 -DWITH_SWIG:BOOL=ON \

 -DPYTHON_EXECUTABLE:FILEPATH=%{__python2} \

 -DPYTHON_INCLUDE_DIR:PATH=%{_includedir}/python%{python2_version} \

 -DPYTHON_LIBRARY:FILEPATH=%{_libdir}/libpython%{python2_version}.so \

%endif

%if 0%{?with_java}

 -DWITH_JAVA:BOOL=ON \

 -DWITH_SWIG:BOOL=ON \

%endif

%if 0%{?with_octave}

 -DWITH_OCTAVE:BOOL=ON \

%endif

%if 0%{?with_perl}

 -DWITH_PERL:BOOL=ON \

%endif

%if 0%{?with_ruby}

 -DWITH_RUBY:BOOL=ON \

%endif

%if 0%{?with_r}

 -DWITH_R:BOOL=ON \

 -DR_INCLUDE_DIRS:PATH=%{_includedir}/R \

%endif

%if 0%{?with_mono}

 -DWITH_CSHARP:BOOL=ON \

 -DWITH_SWIG:BOOL=ON \

%endif

 -DCSHARP_COMPILER:FILEPATH=%{_bindir}/mcs \

%if 0%{?with_doc}

 -DWITH_DOXYGEN:BOOL=ON \

%endif

%if 0%{?with_check}

 -DWITH_CHECK:BOOL=ON \

 -DWITH_EXAMPLES:BOOL=ON \

%endif

 -DLIBSBML_LIBRARY:FILEPATH=%{_libdir}/libsbml.so -DLIBSBML_INCLUDE_DIR:PATH=%{_includedir} \

 -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=%{_libdir} \

 -DCMAKE_INSTALL_PREFIX:PATH=%{_prefix} -DLIBNUML_SHARED_VERSION:BOOL=ON \

 -DEXTRA_LIBS:STRING="sbml;xml2;bz2;z;m;dl" -DLIBSBML_STATIC:BOOL=OFF \

 -DCMAKE_CXX_FLAGS_RELEASE:STRING="-I%{_includedir}/libxml2" \

 -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON \

 -DCPACK_BINARY_TZ:BOOL=OFF -DCPACK_BINARY_TGZ:BOOL=OFF \

 -DCPACK_SOURCE_TBZ2:BOOL=OFF -DCPACK_SOURCE_TGZ:BOOL=OFF \

 -DCPACK_SOURCE_TZ:BOOL=OFF -DWITH_ZLIB:BOOL=ON -DWITH_CPP_NAMESPACE:BOOL=OFF \

 -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES ..

##'Parallel make' breaks Java library's building

%if 0%{?with_java}

make -j1

%else

%make_build

%endif

popd

%if 0%{?with_doc}

doxygen

%endif

####################################################################################################

%install

%make_install -C build

%if 0%{?with_python3}

%make_install -C build2

%endif

mkdir -p $RPM_BUILD_ROOT%{_datadir}/%{name}

##Only for R library

%if 0%{?with_r}

mkdir -p $RPM_BUILD_ROOT%{_libdir}/R/library

%{_bindir}/R CMD INSTALL -l $RPM_BUILD_ROOT%{_libdir}/R/library build/bindings/r/libNUML_%{version}_R_*.tar.gz

test -d %{octpkg}/src && (cd %{octpkg}/src; rm -f *.o *.so)

rm -rf $RPM_BUILD_ROOT%{_libdir}/R/library/%{octpkg}/R.css

# Make symlink instead hard-link

ln -sf %{_libdir}/libNUML.so $RPM_BUILD_ROOT%{_libdir}/R/library/libNUML/libs/libNUML.so

%endif

##

%if 0%{?with_octave}

mkdir -p $RPM_BUILD_ROOT%{octpkgdir}/packinfo

install -pm 644 LICENSE.txt *.md $RPM_BUILD_ROOT%{octpkgdir}/packinfo

%endif

%if 0%{?with_java}

mkdir -p $RPM_BUILD_ROOT%{_libdir}/%{name}

mkdir -p $RPM_BUILD_ROOT%{_jnidir}

mv $RPM_BUILD_ROOT%{_libdir}/libnumlj.so $RPM_BUILD_ROOT%{_libdir}/%{name}/

ln -sf %{_libdir}/%{name}/libnumlj.so $RPM_BUILD_ROOT%{_jnidir}/libnumlj.so

%endif

## Remove libtool archives

find $RPM_BUILD_ROOT -name '*.la' -delete

%ldconfig_scriptlets

%if 0%{?with_r}

%ldconfig_scriptlets -n R-%{octpkg}

%endif

%if 0%{?with_octave}

%post -n octave-%{octpkg}

%octave_cmd pkg rebuild

%postun -n octave-%{octpkg}

%octave_cmd pkg rebuild

%preun -n octave-%{octpkg}

%octave_pkg_preun

%endif

%if 0%{?with_check}

%check

make test -C build2

%endif

%files

%doc *.md

%license LICENSE.txt

%{_libdir}/libnuml.so.*

%if 0%{?with_check}

%exclude %{_datadir}/%{name}

%endif

%files devel

%{_libdir}/%{name}.so

%{_libdir}/cmake/numl-config*.cmake

%{_includedir}/numl/

%files static

%doc *.md

%license LICENSE.txt

%{_libdir}/%{name}-static.a

%{_libdir}/cmake/numl-static-config*.cmake

%if 0%{?with_python2}

%files -n python2-%{name}

%doc *.md

%license LICENSE.txt

%{python2_sitearch}/%{name}/

%{python2_sitearch}/*.pth

%endif

%if 0%{?with_python3}

%files -n python3-%{name}

%doc *.md

%license LICENSE.txt

%{python3_sitearch}/%{name}/

%{python3_sitearch}/*.pth

%endif

%if 0%{?with_java}

%files -n java-%{octpkg}

%{_javadir}/libnumlj.jar

%{_jnidir}/libnumlj.so

%{_libdir}/%{name}/

%endif

%if 0%{?with_octave}

%files -n octave-%{octpkg}

%{octpkgdir}/packinfo

%{octpkglibdir}/

%endif

%if 0%{?with_perl}

%files -n perl-%{octpkg}

%doc *.md

%license LICENSE.txt

%{perl_vendorarch}/LibNUML.*

%exclude %dir %{perl_vendorarch}/auto/

%{perl_vendorarch}/auto/libNUML/

%endif

%if 0%{?with_ruby}

%files -n ruby-%{octpkg}

%doc *.md

%license LICENSE.txt

%{ruby_vendorarchdir}/*.so

%endif

%if 0%{?with_r}

%files -n R-%{octpkg}

%doc *.md

%license LICENSE.txt

%{_libdir}/R/library/libNUML/

%{_libdir}/libNUML.so

%endif

%if 0%{?with_mono}

%files sharp

%doc *.md

%license LICENSE.txt

#%%{_monogacdir}/libnumlcsP

%{_monodir}/LibnumlcsP/

%endif

%if 0%{?with_doc}

%files doc

%license LICENSE.txt

%doc doc/html

%endif

%changelog

* Fri Jul 13 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.1.1-10

- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild

* Tue Jun 19 2018 Miro HronĨok <mhroncok@redhat.com> - 1.1.1-9

- Rebuilt for Python 3.7

* Tue Jun 05 2018 Antonio Trande <sagitterATfedoraproject.org> - 1.1.1-8

- Rebuild for libsbml-5.17.0

- Add javapackages-tools

* Thu Feb 22 2018 Antonio Trande <sagitterATfedoraproject.org> - 1.1.1-7

- Add gcc gcc-c++ BR

* Thu Feb 15 2018 Antonio Trande <sagitterATfedoraproject.org> - 1.1.1-6

- Fix %%ldconfig_scriptlets for sub-package

* Thu Feb 15 2018 Antonio Trande <sagitterATfedoraproject.org> - 1.1.1-5

- Rebuild for libsbml-5.16.0

- Use %%ldconfig_scriptlets

* Wed Feb 07 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.1.1-4

- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild

* Tue Oct 03 2017 Antonio Trande <sagitterATfedoraproject.org> - 1.1.1-3

- Created a static sub-package

* Fri Sep 29 2017 Antonio Trande <sagitterATfedoraproject.org> - 1.1.1-2

- Created a documentation sub-package

- Java shared library moved into a private lib directory

- Java shared library symlinked from /usr/lib/java

* Thu Sep 28 2017 Antonio Trande <sagitterATfedoraproject.org> - 1.1.1-1

- First package