diff --git a/libsbml-arm-fix.patch b/libsbml-arm-fix.patch index f489389..c6a0e99 100644 --- a/libsbml-arm-fix.patch +++ b/libsbml-arm-fix.patch @@ -1,7 +1,7 @@ Index: src/sbml/math-legacy/FormulaParser.c =================================================================== ---- src/sbml/math-legacy/FormulaParser.c (revision 21966) -+++ src/sbml/math-legacy/FormulaParser.c (working copy) +--- a/src/sbml/math-legacy/FormulaParser.c (revision 21966) ++++ b/src/sbml/math-legacy/FormulaParser.c (working copy) @@ -115,7 +115,7 @@ typedef struct { @@ -22,8 +22,8 @@ Index: src/sbml/math-legacy/FormulaParser.c } Index: src/sbml/math/FormulaParser.c =================================================================== ---- src/sbml/math/FormulaParser.c (revision 21966) -+++ src/sbml/math/FormulaParser.c (working copy) +--- a/src/sbml/math/FormulaParser.c (revision 21966) ++++ b/src/sbml/math/FormulaParser.c (working copy) @@ -116,7 +116,7 @@ typedef struct { diff --git a/libsbml-fix_install_libpaths.patch b/libsbml-fix_install_libpaths.patch index 3715b8a..3f3ff36 100644 --- a/libsbml-fix_install_libpaths.patch +++ b/libsbml-fix_install_libpaths.patch @@ -1,7 +1,7 @@ ##This patch sets libraries' installation paths according to the Fedora packaging guidelines ---- src/bindings/ruby/CMakeLists.orig.txt 2014-11-26 13:31:14.000000000 +0100 -+++ src/bindings/ruby/CMakeLists.txt 2014-12-28 23:25:47.035666311 +0100 +--- a/src/bindings/ruby/CMakeLists.orig.txt 2014-11-26 13:31:14.000000000 +0100 ++++ b/src/bindings/ruby/CMakeLists.txt 2014-12-28 23:25:47.035666311 +0100 @@ -170,7 +170,7 @@ if (UNIX OR CYGWIN) execute_process(COMMAND "${RUBY_EXECUTABLE}" -e "print RUBY_PLATFORM" @@ -11,8 +11,8 @@ else() set(RUBY_PACKAGE_INSTALL_DIR ${MISC_PREFIX}bindings/ruby) endif() ---- src/bindings/csharp/CMakeLists.orig.txt 2014-11-26 13:31:17.000000000 +0100 -+++ src/bindings/csharp/CMakeLists.txt 2014-12-29 11:37:43.839593422 +0100 +--- a/src/bindings/csharp/CMakeLists.orig.txt 2014-11-26 13:31:17.000000000 +0100 ++++ b/src/bindings/csharp/CMakeLists.txt 2014-12-29 11:37:43.839593422 +0100 @@ -199,7 +199,7 @@ # set(CSHAPR_PACKAGE_INSTALL_DIR) @@ -22,8 +22,8 @@ else() set(CSHAPR_PACKAGE_INSTALL_DIR ${MISC_PREFIX}bindings/csharp) endif() ---- src/bindings/octave/CMakeLists.orig.txt 2014-11-26 13:31:10.000000000 +0100 -+++ src/bindings/octave/CMakeLists.txt 2014-12-29 11:44:51.031069073 +0100 +--- a/src/bindings/octave/CMakeLists.orig.txt 2014-11-26 13:31:10.000000000 +0100 ++++ b/src/bindings/octave/CMakeLists.txt 2014-12-29 11:44:51.031069073 +0100 @@ -67,7 +67,7 @@ if (UNIX OR CYGWIN) execute_process(COMMAND "${OCTAVE_CONFIG_EXECUTABLE}" -p CANONICAL_HOST_TYPE @@ -33,8 +33,8 @@ else() set(OCTAVE_PACKAGE_INSTALL_DIR ${MISC_PREFIX}bindings/octave) endif() ---- src/bindings/perl/CMakeLists.orig.txt 2014-11-26 13:31:13.000000000 +0100 -+++ src/bindings/perl/CMakeLists.txt 2014-12-29 11:48:53.705649453 +0100 +--- a/src/bindings/perl/CMakeLists.orig.txt 2014-11-26 13:31:13.000000000 +0100 ++++ b/src/bindings/perl/CMakeLists.txt 2014-12-29 11:48:53.705649453 +0100 @@ -176,7 +176,7 @@ string(REPLACE "'" "" PERL_PLATFORM ${PERL_PLATFORM}) string(REPLACE ";" "" PERL_PLATFORM ${PERL_PLATFORM}) diff --git a/libsbml.spec b/libsbml.spec index 5db96f2..18f62d1 100644 --- a/libsbml.spec +++ b/libsbml.spec @@ -186,12 +186,7 @@ This package contains %{summary}. %endif %prep -%setup -q -n libSBML-%{version}-Source -%patch0 -p1 -%patch1 -p1 -%patch2 -p0 -%patch3 -p0 -%patch4 -p0 +%autosetup -n libSBML-%{version}-Source -p1 sed -i -r 's/DOXYGEN_MAX_VERSION=1\.8\.8/DOXYGEN_MAX_VERSION=1.8.9/' configure @@ -325,9 +320,9 @@ install -Dm0644 src/bindings/ruby/README.txt %{buildroot}%{_pkgdocdir}/README-ru %if %{with check} %check %if %{with python} -make -C build2 %{?_smp_mflags} check +make -C build2 check CTEST_OUTPUT_ON_FAILURE=TRUE %endif -make -C build %{?_smp_mflags} check +make -C build check CTEST_OUTPUT_ON_FAILURE=TRUE %endif %post -p /sbin/ldconfig @@ -415,7 +410,7 @@ make -C build %{?_smp_mflags} check %changelog * Fri Feb 06 2015 Zbigniew Jędrzejewski-Szmek - 5.11.0-10 -- Rename -doc to -docs, run make unparallized +- Rename -docs to -doc, run make unparallelized * Wed Feb 04 2015 Zbigniew Jędrzejewski-Szmek - 5.11.0-9 - Apply upstream patch for arm test failures diff --git a/libsbml_csharp-unexpected_symbol_error.patch b/libsbml_csharp-unexpected_symbol_error.patch index 5c06b8b..14132cf 100644 --- a/libsbml_csharp-unexpected_symbol_error.patch +++ b/libsbml_csharp-unexpected_symbol_error.patch @@ -1,5 +1,5 @@ ---- src/bindings/csharp/Makefile.orig.in 2014-11-26 13:31:17.000000000 +0100 -+++ src/bindings/csharp/Makefile.in 2014-12-27 19:41:02.511977754 +0100 +--- a/src/bindings/csharp/Makefile.orig.in 2014-11-26 13:31:17.000000000 +0100 ++++ b/src/bindings/csharp/Makefile.in 2014-12-27 19:41:02.511977754 +0100 @@ -482,6 +482,7 @@ # files too -- both are made by running swig. -