%global octpkg iso2mesh

Name:           octave-%{octpkg}
Version:        1.9.6
Release:        15%{?dist}
Summary:        A 3D surface and volumetric mesh generator for MATLAB/Octave
# Main package: GPLv3+
# Meshfix: GPLv2+
# JMeshLib: GPLv2+
# Tetgen: AGPLv3+
License: GPLv3+ and GPLv2+ and AGPLv3+

URL:            http://iso2mesh.sf.net
# the following utilities are called internally by iso2mesh (stored under a private folder),
# this is needed for making outputs reproducible
Source0:        https://github.com/fangq/iso2mesh/archive/v%{version}/%{octpkg}-%{version}.tar.gz
Source1:        https://github.com/fangq/cork/archive/v0.9.1/cork-0.9.1.tar.gz
Source2:        https://github.com/fangq/meshfix/archive/v1.2.2/meshfix-1.2.2.tar.gz
Source3:        http://ftp.mcs.anl.gov/pub/petsc/externalpackages/tetgen1.5.1.tar.gz

#  Policy CMP0064 is not set: Support new TEST if() operator.
# See also https://github.com/CGAL/cgal/issues/5857
Patch0:         iso2mesh-1.9.6-CMakeCMP0064.patch

# Fix the incorrect detection of Boost version
# > -- NOTICE: This program requires Boost >= 1.34.1, and will not be compiled.
Patch1:         iso2mesh-1.9.6-recent_Boost_version.patch
Patch2:         octave-iso2mesh-c99.patch

ExcludeArch:    armv7hl
BuildRequires: make
BuildRequires:  cmake CGAL-devel SuperLU-devel gcc-c++ zlib-devel octave-devel

%if 0%{?fedora} >=32
Requires:       octave mpfr-devel boost-devel SuperLU octave-jsonlab octave-jnifti octave-zmat
%else
Requires:       octave CGAL SuperLU octave-jsonlab octave-jnifti octave-zmat
%endif

Requires(post): octave
Requires(postun): octave

%description
Iso2Mesh is a MATLAB/Octave-based mesh generation toolbox,
designed for easy creation of high quality surface and
tetrahedral meshes from 3D volumetric images. It contains
a rich set of mesh processing scripts/programs, working
either independently or interacting with external free
meshing utilities. Iso2Mesh toolbox can directly convert
a 3D image stack, including binary, segmented or gray-scale
images such as MRI or CT scans, into quality volumetric
meshes. This makes it particularly suitable for multi-modality
medical imaging data analysis and multi-physics modeling.
Iso2Mesh is cross-platform and is compatible with both MATLAB
and GNU Octave.

%package -n %{octpkg}-demos
Summary:        Example datasets and scripts for the Iso2Mesh toolbox
BuildArch:      noarch
Requires:       octave octave-%{octpkg}
Recommends:     %{octpkg}-demos

%description -n %{octpkg}-demos
This package contains the demo script and sample datasets for octave-%{octpkg}.

%prep
%setup -q -b 1 -n %{octpkg}-%{version}
%setup -q -T -D -b 2 -n meshfix-1.2.2
%setup -q -T -D -b 3 -n %{octpkg}-%{version}
%patch -P 0 -z .bak -p1
%patch -P 1 -z .bak -p1
rm -rf tools/cork
rm -rf tools/meshfix
rm -rf tools/tetgen
mv ../cork-0.9.1 tools/cork
mv ../meshfix-1.2.2 tools/meshfix
mv ../tetgen1.5.1 tools/tetgen
%patch -P 2 -p1
rm -rf bin/*.mex* bin/*.exe bin/*.dll

cp COPYING.txt COPYING

mkdir -p inst/

rm -rf base64decode base64encode fast_match_bracket gzipdecode gzipencode \
jdatadecode jdataencode jnifticreate loadjnifti loadjson loadmsgpack \
loadnifti loadubjson lz4decode lz4encode lz4hcdecode lz4hcencode lzipdecode \
lzipencode lzmadecode lzmaencode match_bracket nestbracket2dim nifticreate \
nii2jnii niicodemap niiformat readnifti savebnii savejnifti savejnii \
savemsgpack savenifti saveubjson zlibdecode zlibencode

mv *.m inst/
mv img2mesh.fig inst/

# Fix jmeshlib build flags
sed -e "s|-Wall|%{optflags}|;s|^LIBS = |&$RPM_LD_FLAGS |" \
    -i tools/meshfix/contrib/JMeshLib/test/Makefile

# Link FlexiBLAS instead of BLAS
sed -e "s| blas| flexiblas|" -i tools/meshfix/CMakeLists.txt

# Fix tetgen build flags
sed -e "s|^\(CXXFLAGS = \).*|\1%{optflags} $RPM_LD_FLAGS|" \
    -e "s|-O0|%{optflags} $RPM_LD_FLAGS|" \
    -i tools/tetgen/makefile

%build
%set_build_flags
%if 0%{?__isa_bits} == 32
# Reduce the debuginfo level to avoid virtual memory exhaustion
CXXFLAGS="${CXXFLAGS-} -g1"
%endif
pushd tools
# can't use make_build macro below because parallel make with CGAL exhausts
# vm's memory and crash the building process, use sequential make instead
make USERCCFLAGS="%{optflags}"
popd
pushd bin
ln -s tetgen1.5 tetgen
popd

mkdir inst/bin
pushd bin
for exec in *; do
   ln -s %{_libexecdir}/%{octpkg}/$exec ../inst/bin/$exec
done
popd
%octave_pkg_build

%if 0%{?fedora} <=30
   %global octave_tar_suffix any-none
%endif

%install
%octave_pkg_install
install -m 0755 -vd  %{buildroot}%{_libexecdir}/%{octpkg}
install -m 0755 -vp  bin/* %{buildroot}%{_libexecdir}/%{octpkg}/

%post
%octave_cmd pkg rebuild

%preun
%octave_pkg_preun

%postun
%octave_cmd pkg rebuild

%files
%license COPYING.txt
%doc README.txt
%doc Content.txt
%doc AUTHORS.txt
%doc ChangeLog.txt
%dir %{octpkgdir}
%dir %{octpkgdir}/doc
%dir %{octpkgdir}/bin
%{_libexecdir}/%{octpkg}
%{octpkgdir}/doc/*
%{octpkgdir}/bin/*
%{octpkgdir}/*.m
%{octpkgdir}/*.fig
%doc %{octpkgdir}/doc-cache
%{octpkgdir}/packinfo

%files -n %{octpkg}-demos
%license COPYING.txt
%doc sample

%changelog
* Thu Jan 25 2024 Fedora Release Engineering <releng@fedoraproject.org> - 1.9.6-15
- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild

* Sun Jan 21 2024 Fedora Release Engineering <releng@fedoraproject.org> - 1.9.6-14
- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild

* Thu Jul 20 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.9.6-13
- Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild

* Fri Jul 07 2023 Antonio Trande <sagitter@fedoraproject.org> - 1.9.6-12
- Rebuild for SuperLU-6.0.0

* Fri Apr 14 2023 Florian Weimer <fweimer@redhat.com> - 1.9.6-11
- Port to C99

* Sun Apr 09 2023 Orion Poplawski <orion@nwra.com> - 1.9.6-10
- Rebuild for octave 8.1.0

* Thu Jan 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.9.6-9
- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild

* Fri Jul 22 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.9.6-8
- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild

* Wed Jun 01 2022 Orion Poplawski <orion@nwra.com> - 1.9.6-7
- Rebuild for octave 7.1

* Fri May 06 2022 Iñaki Úcar <iucar@fedoraproject.org> - 1.9.6-6
- https://fedoraproject.org/wiki/Changes/FlexiBLAS_as_BLAS/LAPACK_manager

* Thu Jan 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.9.6-5
- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild

* Sat Oct 30 2021 Antonio Trande <sagitter@fedoraproject.org> - 1.9.6-3
- Rebuild for SuperLU-5.3.0

* Thu Jul 22 2021 Qianqian Fang <fangqq@gmail.com> - 1.9.6-3
- Apply makefile patch by Laurent Rineau, fix CGAL build error on F35, fix #1917433

* Tue Jan 26 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.9.6-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild

* Fri Sep 04 2020 Qianqian Fang <fangqq@gmail.com> - 1.9.6-1
- New upstream release 1.9.6

* Sat Aug 01 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.9.1-7
- Fix cgal build error on F34
- Second attempt - Rebuilt for
  https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild

* Tue Jul 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.9.1-6
- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild

* Wed Jan 29 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.9.1-5
- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild

* Mon Nov 25 2019 Jerry James <loganjerry@gmail.com> - 1.9.1-4
- Rebuild for mpfr 4
- Use Fedora build flags when building jmeshlib and tetgen

* Fri Oct 11 2019 Qianqian Fang <fangqq@gmail.com> - 1.9.1-3
- Define octave package-level dependency via the DESCRIPTION file
- Remove gmp-devel from Requires

* Thu Oct 10 2019 Qianqian Fang <fangqq@gmail.com> - 1.9.1-2
- Fix licenses
- Move binaries to libexec

* Wed Oct 02 2019 Qianqian Fang <fangqq@gmail.com> - 1.9.1-1
- Initial package