|
 |
cbab4bc |
# Broken package_note links in rules and variables files
|
|
|
cbab4bc |
# Disabling this functionality
|
|
|
cbab4bc |
%undefine _package_note_file
|
|
|
cbab4bc |
|
|
|
a5dd511 |
# Disable LTO
|
|
|
4cb045c |
# undefined-non-weak-symbol libpetsc.so.3.*_glibcxx_assert_fail
|
|
|
a5dd511 |
%undefine _ld_as_needed
|
|
|
93af49f |
%global _lto_cflags %{nil}
|
|
|
93af49f |
|
|
|
ff23c78 |
# Testing libpetsc ?
|
|
|
05d358e |
%bcond_without check
|
|
|
ff23c78 |
#
|
|
|
ff23c78 |
|
|
|
ff23c78 |
# Python binding and its testing
|
|
|
fe12645 |
%bcond_without python
|
|
|
234975d |
# Python tests need Cython
|
|
|
d5b5ccd |
# Python tests need epydoc (no longer available)
|
|
|
d5b5ccd |
%bcond_with pycheck
|
|
|
ff23c78 |
%global pymodule_name petsc4py
|
|
|
8bd9c29 |
%global pymodule_version %{version}
|
|
|
ff23c78 |
#
|
|
|
ece75dc |
|
|
|
1e5bc60 |
## Debug builds ?
|
|
|
471d88f |
%bcond_with debug
|
|
|
ece75dc |
#
|
|
|
ece75dc |
|
|
|
2606434 |
## Fix Epoch in EPEL9
|
|
|
2606434 |
%if 0%{?el9}
|
|
|
2606434 |
%global epoch 1
|
|
|
2606434 |
%else
|
|
|
2606434 |
%global epoch 0
|
|
|
2606434 |
%endif
|
|
|
ece75dc |
|
|
|
fe12645 |
%bcond_without mpich
|
|
 |
862b561 |
%if 0%{?fedora} >= 40
|
|
|
862b561 |
%ifarch %{ix86}
|
|
|
ae33a35 |
%bcond_with openmpi
|
|
|
ae33a35 |
%else
|
|
|
e11f3e6 |
%bcond_without openmpi
|
|
|
ae33a35 |
%endif
|
|
|
862b561 |
%else
|
|
|
862b561 |
%bcond_without openmpi
|
|
|
862b561 |
%endif
|
|
|
9d9cb3d |
|
|
|
9d9cb3d |
%if %{?__isa_bits:%{__isa_bits}}%{!?__isa_bits:32} == 64
|
|
|
fe12645 |
%bcond_without arch64
|
|
|
9d9cb3d |
%else
|
|
|
9d9cb3d |
%bcond_with arch64
|
|
|
4597712 |
%endif
|
|
|
b4a5b38 |
|
|
|
9d9cb3d |
%bcond_without blas
|
|
|
9d9cb3d |
%if %{with arch64}
|
|
|
9d9cb3d |
%bcond_without blas64
|
|
|
9d9cb3d |
%endif
|
|
|
c3c3682 |
|
|
 |
48342c7 |
%global blaslib flexiblas
|
|
|
48342c7 |
%global blasvar %{nil}
|
|
|
48342c7 |
|
|
|
ece75dc |
#
|
|
|
ece75dc |
## PETSC looks incompatible with serial MUMPS
|
|
|
7d2e1c8 |
%bcond_without mumps_serial
|
|
|
ece75dc |
#
|
|
|
ff23c78 |
## Sundials needs mpi ?
|
|
|
42e5f9e |
%bcond_with sundials_serial
|
|
|
42e5f9e |
#
|
|
|
ece75dc |
%bcond_without superlu
|
|
|
ece75dc |
#
|
|
|
ece75dc |
|
|
|
7d2e1c8 |
## Suitesparse
|
|
|
d293ecb |
## This version of PETSc needs the 5.6.0 at least
|
|
|
7d2e1c8 |
%bcond_with suitesparse
|
|
|
7d2e1c8 |
%bcond_with suitesparse64
|
|
|
7d2e1c8 |
#
|
|
|
7d2e1c8 |
|
|
|
680bb22 |
## SuperLUDIST needs parmetis
|
|
|
680bb22 |
%bcond_without superludist >= 6.3.0
|
|
|
df7dae1 |
%bcond_with cgns
|
|
|
eada8e5 |
%bcond_without hdf5
|
|
|
722a325 |
%bcond_with superlumt
|
|
|
722a325 |
#
|
|
|
722a325 |
|
|
|
bf2bc91 |
## Tetgen
|
|
|
bf2bc91 |
%bcond_with tetgen
|
|
|
bf2bc91 |
#
|
|
|
bf2bc91 |
|
|
|
680bb22 |
## Metis
|
|
|
680bb22 |
%bcond_without metis
|
|
|
680bb22 |
%bcond_without metis64
|
|
|
680bb22 |
#
|
|
|
680bb22 |
|
|
|
ff23c78 |
# 'scalapack' is required by 'MUMPS'
|
|
|
ece75dc |
%if %{with openmpi}
|
|
|
ece75dc |
%bcond_without mpi
|
|
|
154f8c8 |
# PETSC-3.* is incompatible with Sundials 3+
|
|
|
e72e997 |
%bcond_with sundials
|
|
|
ece75dc |
%bcond_without scalapack
|
|
|
ece75dc |
%bcond_without mumps
|
|
|
1e5bc60 |
%bcond_without ptscotch
|
|
|
ece75dc |
%bcond_without hypre
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
|
|
|
ece75dc |
%if %{with mpich}
|
|
|
ece75dc |
%bcond_without mpi
|
|
|
7d2e1c8 |
# PETSC-3.* is incompatible with Sundials 3+
|
|
|
e72e997 |
%bcond_with sundials
|
|
|
ece75dc |
%bcond_without scalapack
|
|
|
ece75dc |
%bcond_without mumps
|
|
|
1e5bc60 |
%bcond_without ptscotch
|
|
|
ece75dc |
%bcond_without hypre
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
|
|
|
7d2e1c8 |
%global petsc_build_options \\\
|
|
|
7d2e1c8 |
%if %{with debug} \
|
|
|
7d2e1c8 |
CFLAGS="-O0 -g -Wl,-z,now -fPIC" CXXFLAGS="-O0 -g -Wl,-z,now -fPIC" FFLAGS="-O0 -g -Wl,-z,now -fPIC -I%{_libdir}/gfortran/modules" COPTFLAGS="-O0 -g -Wl,-z,now" \\\
|
|
|
7d2e1c8 |
CXXOPTFLAGS="-O0 -g -Wl,-z,now" FOPTFLAGS="-O0 -g -Wl,-z,now -I%{_libdir}/gfortran/modules" LDFLAGS="$LDFLAGS -fPIC" \\\
|
|
|
6c55a29 |
FCFLAGS="-O0 -g -Wl,-z,now -fPIC -I%{_libdir}/gfortran/modules" \\\
|
|
|
7d2e1c8 |
%else \
|
|
|
7d2e1c8 |
CFLAGS="$CFLAGS -O3 -fPIC" CXXFLAGS="$CXXFLAGS -O3 -fPIC" FFLAGS="$FFLAGS -O3 -fPIC" LDFLAGS="$LDFLAGS -fPIC" \\\
|
|
|
9645be1 |
COPTFLAGS="$CFLAGS -O3" CXXOPTFLAGS="$CXXFLAGS -O3" FOPTFLAGS="$FFLAGS -O3" \\\
|
|
|
6c55a29 |
FCFLAGS="$FFLAGS -O3 -fPIC" \\\
|
|
|
7d2e1c8 |
%endif \
|
|
|
7d2e1c8 |
--CC_LINKER_FLAGS="$LDFLAGS" \\\
|
|
|
7d2e1c8 |
--FC_LINKER_FLAGS="$LDFLAGS -lgfortran" \\\
|
|
|
7d2e1c8 |
--with-default-arch=0 --with-make=1 \\\
|
|
|
d5b5ccd |
--with-cmake-exec=%{_bindir}/cmake --with-ctest-exec=%{_bindir}/ctest \\\
|
|
|
7d2e1c8 |
--with-single-library=1 \\\
|
|
|
7d2e1c8 |
--with-precision=double \\\
|
|
|
7d2e1c8 |
--with-petsc-arch=%{_arch} \\\
|
|
|
7d2e1c8 |
--with-clanguage=C \\\
|
|
|
7d2e1c8 |
--with-shared-libraries=1 \\\
|
|
|
7d2e1c8 |
--with-fortran-interfaces=1 \\\
|
|
|
7d2e1c8 |
--with-windows-graphics=0 \\\
|
|
|
7d2e1c8 |
--CC=gcc \\\
|
|
|
7d2e1c8 |
--FC=gfortran \\\
|
|
|
7d2e1c8 |
--CXX=g++ \\\
|
|
|
7d2e1c8 |
--with-shared-ld=ld \\\
|
|
|
7d2e1c8 |
--with-pic=1 \\\
|
|
|
7d2e1c8 |
--with-clib-autodetect=0 \\\
|
|
|
7d2e1c8 |
--with-fortranlib-autodetect=0 \\\
|
|
|
7d2e1c8 |
--with-threadsafety=0 --with-log=1 \\\
|
|
|
6a0cc22 |
--with-mkl_sparse=0 \\\
|
|
|
6a0cc22 |
--with-mkl_sparse_optimize=0 \\\
|
|
|
6a0cc22 |
--with-mkl_cpardiso=0 \\\
|
|
|
6a0cc22 |
--with-mkl_pardiso=0 \\\
|
|
|
9645be1 |
--with-python=0 \\\
|
|
|
9645be1 |
--with-cxxlib-autodetect=1 \\\
|
|
|
7d2e1c8 |
%if %{with debug} \
|
|
|
7d2e1c8 |
--with-debugging=1 \\\
|
|
|
7d2e1c8 |
%else \
|
|
|
7d2e1c8 |
--with-debugging=0 \\\
|
|
|
7d2e1c8 |
%endif \
|
|
|
7d2e1c8 |
%if %{with mumps_serial} \
|
|
|
7d2e1c8 |
--with-mumps-serial=1 \\\
|
|
|
7d2e1c8 |
%endif \
|
|
|
7d2e1c8 |
--with-mpi=0 \\\
|
|
|
7d2e1c8 |
%if %{with hdf5} \
|
|
|
7d2e1c8 |
--with-hdf5=1 \\\
|
|
|
7d2e1c8 |
--with-hdf5-include= \\\
|
|
|
7d2e1c8 |
--with-hdf5-lib="-lhdf5 -lhdf5_hl" \\\
|
|
|
7d2e1c8 |
%endif \
|
|
|
7d2e1c8 |
%if %{with cgns} \
|
|
|
df7dae1 |
--with-cgns=0 \\\
|
|
|
7d2e1c8 |
%endif \
|
|
|
7d2e1c8 |
--with-x=1 \\\
|
|
|
7d2e1c8 |
--with-openmp=0 \\\
|
|
|
7d2e1c8 |
--with-hwloc=0 \\\
|
|
|
7d2e1c8 |
--with-ssl=0 \\\
|
|
|
7d2e1c8 |
%if %{with sundials_serial} \
|
|
|
7d2e1c8 |
--with-sundials=1 \\\
|
|
|
7d2e1c8 |
--with-sundials-include=%{_includedir} \\\
|
|
|
7d2e1c8 |
--with-sundials-lib="-lsundials_nvecserial -lsundials_cvode" \\\
|
|
|
7d2e1c8 |
%endif \
|
|
David Abdurachmanov |
52d7cd2 |
%ifarch %{valgrind_arches} \
|
|
David Abdurachmanov |
52d7cd2 |
--with-valgrind=1 \\\
|
|
David Abdurachmanov |
52d7cd2 |
%endif \
|
|
David Abdurachmanov |
52d7cd2 |
--with-pthread=1
|
|
|
7d2e1c8 |
|
|
|
7d2e1c8 |
%global petsc_mpibuild_options \\\
|
|
|
7d2e1c8 |
%if %{with debug} \
|
|
|
7d2e1c8 |
CFLAGS="-O0 -g -Wl,-z,now -fPIC" CXXFLAGS="-O0 -g -Wl,-z,now -fPIC" FFLAGS="-O0 -g -Wl,-z,now -fPIC -I${MPI_FORTRAN_MOD_DIR}" COPTFLAGS="-O0 -g -Wl,-z,now" \\\
|
|
|
7d2e1c8 |
CXXOPTFLAGS="-O0 -g -Wl,-z,now" FOPTFLAGS="-O0 -g -Wl,-z,now -I${MPI_FORTRAN_MOD_DIR}" LDFLAGS="$LDFLAGS -fPIC" \\\
|
|
|
6c55a29 |
FCFLAGS="-O0 -g -Wl,-z,now -fPIC -I${MPI_FORTRAN_MOD_DIR}" \\\
|
|
|
7d2e1c8 |
%else \
|
|
|
7d2e1c8 |
CFLAGS="$CFLAGS -O3 -fPIC" CXXFLAGS="$CXXFLAGS -O3 -fPIC" FFLAGS="$FFLAGS -O3 -fPIC" LDFLAGS="$LDFLAGS -fPIC" \\\
|
|
|
9645be1 |
COPTFLAGS="$CFLAGS -O3" CXXOPTFLAGS="$CXXFLAGS -O3" FOPTFLAGS="$FFLAGS -O3" \\\
|
|
|
6c55a29 |
FCFLAGS="$FFLAGS -O3 -fPIC" \\\
|
|
|
7d2e1c8 |
%endif \
|
|
|
7d2e1c8 |
--CC_LINKER_FLAGS="$LDFLAGS" \\\
|
|
|
7d2e1c8 |
--with-default-arch=0 --with-make=1 \\\
|
|
|
d5b5ccd |
--with-cmake-exec=%{_bindir}/cmake --with-ctest-exec=%{_bindir}/ctest \\\
|
|
|
7d2e1c8 |
--with-single-library=1 \\\
|
|
|
7d2e1c8 |
--with-precision=double \\\
|
|
|
7d2e1c8 |
--with-petsc-arch=%{_arch} \\\
|
|
|
7d2e1c8 |
--with-clanguage=C \\\
|
|
|
7d2e1c8 |
--with-shared-libraries=1 \\\
|
|
|
7d2e1c8 |
--with-fortran-interfaces=1 \\\
|
|
|
7d2e1c8 |
--with-windows-graphics=0 \\\
|
|
|
eada8e5 |
--with-cc=${MPI_BIN}/mpicc \\\
|
|
|
eada8e5 |
--with-cxx=${MPI_BIN}/mpicxx \\\
|
|
|
eada8e5 |
--with-fc=${MPI_BIN}/mpif90 \\\
|
|
|
7d2e1c8 |
--with-shared-ld=ld \\\
|
|
|
7d2e1c8 |
--with-pic=1 \\\
|
|
|
7d2e1c8 |
--with-clib-autodetect=0 \\\
|
|
|
7d2e1c8 |
--with-fortranlib-autodetect=0 \\\
|
|
|
6a0cc22 |
--with-mkl_sparse=0 \\\
|
|
|
6a0cc22 |
--with-mkl_sparse_optimize=0 \\\
|
|
|
6a0cc22 |
--with-mkl_cpardiso=0 \\\
|
|
|
6a0cc22 |
--with-mkl_pardiso=0 \\\
|
|
|
ff23c78 |
%if %{with python} \
|
|
|
ff23c78 |
--with-python=1 \\\
|
|
|
ff23c78 |
--with-python-exec=%{__python3} \\\
|
|
|
d293ecb |
--with-petsc4py=1 \\\
|
|
|
d293ecb |
--with-petsc4py-test-np="`/usr/bin/getconf _NPROCESSORS_ONLN`" \\\
|
|
|
ff23c78 |
%endif \
|
|
|
9645be1 |
--with-cxxlib-autodetect=1 \\\
|
|
|
7d2e1c8 |
--with-threadsafety=0 --with-log=1 \\\
|
|
|
7d2e1c8 |
%if %{with debug} \
|
|
|
7d2e1c8 |
--with-debugging=1 \\\
|
|
|
8bd9c29 |
--with-mpiexec="${MPI_BIN}/mpiexec -n `/usr/bin/getconf _NPROCESSORS_ONLN` --mca btl_base_warn_component_unused 0 --mca orte_base_help_aggregate 0" \\\
|
|
|
7d2e1c8 |
%else \
|
|
|
7d2e1c8 |
--with-debugging=0 \\\
|
|
|
8bd9c29 |
--with-mpiexec="${MPI_BIN}/mpiexec -n `/usr/bin/getconf _NPROCESSORS_ONLN` --mca btl_base_warn_component_unused 0" \\\
|
|
|
7d2e1c8 |
%endif \
|
|
|
7d2e1c8 |
%if %{with scalapack} \
|
|
|
7d2e1c8 |
--with-scalapack=1 \\\
|
|
|
7d2e1c8 |
--with-scalapack-lib="-L$MPI_LIB -lscalapack" \\\
|
|
|
7d2e1c8 |
--with-scalapck-include="" \\\
|
|
|
7d2e1c8 |
%endif \
|
|
|
7d2e1c8 |
%if %{with mpi} \
|
|
|
7d2e1c8 |
--with-mpi=1 \\\
|
|
|
7d2e1c8 |
%endif \
|
|
|
7d2e1c8 |
%if %{with cgns} \
|
|
|
7d2e1c8 |
--with-cgns=1 \\\
|
|
|
df7dae1 |
--with-cgns-include=%{_includedir} \\\
|
|
|
7d2e1c8 |
--with-cgns-lib=-lcgns \\\
|
|
|
7d2e1c8 |
%endif \
|
|
|
7d2e1c8 |
%if %{with hdf5} \
|
|
|
7d2e1c8 |
--with-hdf5=1 \\\
|
|
|
7d2e1c8 |
--with-hdf5-include= \\\
|
|
|
7d2e1c8 |
--with-hdf5-lib="-L$MPI_LIB -lhdf5 -lhdf5_hl" \\\
|
|
|
7d2e1c8 |
%endif \
|
|
|
7d2e1c8 |
%if %{with ptscotch} \
|
|
|
7d2e1c8 |
--with-ptscotch=1 \\\
|
|
|
351a2e8 |
%if 0%{?rhel} \
|
|
|
351a2e8 |
--with-ptscotch-include=$MPI_INCLUDE \\\
|
|
|
351a2e8 |
%else \
|
|
|
df7dae1 |
--with-ptscotch-include=$MPI_INCLUDE/scotch \\\
|
|
|
351a2e8 |
%endif \
|
|
|
7d2e1c8 |
--with-ptscotch-lib="-L$MPI_LIB -lptscotch -lscotch -lptscotcherr -lscotcherr" \\\
|
|
|
7d2e1c8 |
%endif \
|
|
|
7d2e1c8 |
%if %{with mumps} \
|
|
|
7d2e1c8 |
--with-mumps=1 \\\
|
|
|
7d2e1c8 |
%endif \
|
|
|
7d2e1c8 |
%if %{with sundials} \
|
|
|
7d2e1c8 |
--with-sundials=1 \\\
|
|
|
7d2e1c8 |
--with-sundials-include=$MPI_INCLUDE \\\
|
|
|
7d2e1c8 |
--with-sundials-lib=-lsundials_nvecparallel \\\
|
|
|
7d2e1c8 |
%endif \
|
|
|
7d2e1c8 |
%if %{with superludist} \
|
|
|
7d2e1c8 |
--with-superlu_dist=1 \\\
|
|
|
7d2e1c8 |
--with-superlu_dist-include=$MPI_INCLUDE/superlu_dist \\\
|
|
|
7d2e1c8 |
--with-superlu_dist-lib=-lsuperlu_dist \\\
|
|
|
7d2e1c8 |
%endif \
|
|
|
7d2e1c8 |
--with-x=1 \\\
|
|
|
7d2e1c8 |
--with-openmp=0 \\\
|
|
|
7d2e1c8 |
--with-hwloc=0 \\\
|
|
|
7d2e1c8 |
--with-ssl=0 \\\
|
|
|
7d2e1c8 |
%if %{with hypre} \
|
|
|
7d2e1c8 |
--with-hypre=1 \\\
|
|
|
7d2e1c8 |
--with-hypre-include=$MPI_INCLUDE/hypre \\\
|
|
|
7d2e1c8 |
--with-hypre-lib="-L$MPI_LIB -lHYPRE" \\\
|
|
|
7d2e1c8 |
%endif \
|
|
|
7d2e1c8 |
%if %{with fftw} \
|
|
|
7d2e1c8 |
--with-fftw=1 \\\
|
|
|
7d2e1c8 |
--with-fftw-include= \\\
|
|
|
7d2e1c8 |
--with-fftw-lib="-L$MPI_LIB -lfftw3_mpi -lfftw3" \\\
|
|
|
7d2e1c8 |
%endif \
|
|
David Abdurachmanov |
52d7cd2 |
%ifarch %{valgrind_arches} \
|
|
David Abdurachmanov |
52d7cd2 |
--with-valgrind=1 \\\
|
|
David Abdurachmanov |
52d7cd2 |
%endif \
|
|
David Abdurachmanov |
52d7cd2 |
--with-pthread=1
|
|
|
412a009 |
|
|
|
412a009 |
%global mpichversion %(rpm -qi mpich | awk -F': ' '/Version/ {print $2}')
|
|
|
412a009 |
%global openmpiversion %(rpm -qi openmpi | awk -F': ' '/Version/ {print $2}')
|
|
|
5cba6bd |
%global majorver 3
|
|
|
0ef5b08 |
%global releasever 3.20
|
|
|
9d6eb52 |
|
|
|
ece75dc |
Name: petsc
|
|
|
ece75dc |
Summary: Portable Extensible Toolkit for Scientific Computation
|
|
|
4cb045c |
Version: %{releasever}.6
|
|
|
68b0545 |
Release: %autorelease
|
|
|
68b28a0 |
License: BSD-2-Clause
|
|
|
8bd9c29 |
URL: https://petsc.org/
|
|
|
c3f64b1 |
Source0: https://web.cels.anl.gov/projects/%{name}/download/release-snapshots/%{name}-with-docs-%{version}.tar.gz
|
|
|
ece75dc |
|
|
|
56c2842 |
# These files have been generated by Cython-3.0.6
|
|
|
56c2842 |
# PETSC-3.20+ needs Cython-3.0.0, these files are used in EPEL9
|
|
|
56c2842 |
Source1: %{name}-3.20-PETSc_cython3.0.6.c
|
|
|
56c2842 |
Source2: %{name}-3.20-PETSc_cython3.0.6.h
|
|
|
56c2842 |
Source3: %{name}-3.20-PETSc_api_cython3.0.6.h
|
|
|
7ca294b |
|
|
|
ece75dc |
## Remove rpath flags
|
|
|
c1598ba |
Patch0: %{name}-3.11-no-rpath.patch
|
|
|
ece75dc |
|
|
|
ece75dc |
## Rename library name for 64-bit integer package
|
|
|
ece75dc |
Patch1: %{name}-lib64.patch
|
|
|
7ca294b |
Patch3: %{name}-3.19.4-fix_mumps_includes.patch
|
|
|
7ca294b |
Patch4: %{name}-3.19.4-fix_metis64.patch
|
|
|
6a0cc22 |
Patch6: %{name}-3.14.1-fix_pkgconfig_file.patch
|
|
|
b9c4a64 |
Patch7: %{name}-3.17.0-avoid_fake_MKL_detection.patch
|
|
|
3386a9b |
|
|
|
ece75dc |
%if %{with superlu}
|
|
|
c81b773 |
BuildRequires: SuperLU-devel >= 5.2.0
|
|
|
ece75dc |
%endif
|
|
|
722a325 |
%if %{with superlumt}
|
|
|
722a325 |
BuildRequires: SuperLUMT-devel
|
|
|
722a325 |
%endif
|
|
|
ece75dc |
%if %{with mumps_serial}
|
|
|
4cb045c |
BuildRequires: MUMPS-devel
|
|
|
ece75dc |
%endif
|
|
|
7d2e1c8 |
%if %{with metis}
|
|
|
7d2e1c8 |
BuildRequires: metis-devel >= 5.1.0
|
|
|
03de112 |
%endif
|
|
|
7d2e1c8 |
%if %{with suitesparse}
|
|
|
7d2e1c8 |
BuildRequires: suitesparse-devel >= 5.6.0
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
%if %{with blas}
|
|
|
48342c7 |
BuildRequires: %{blaslib}-devel
|
|
|
ece75dc |
%endif
|
|
|
bf2bc91 |
BuildRequires: chrpath
|
|
|
d5b5ccd |
BuildRequires: gcc, gcc-c++, cmake
|
|
|
eada8e5 |
BuildRequires: gcc-gfortran
|
|
|
eada8e5 |
BuildRequires: make
|
|
|
ece75dc |
BuildRequires: libX11-devel
|
|
|
45b8086 |
BuildRequires: python3-devel
|
|
|
f12f75c |
BuildRequires: python3-setuptools
|
|
|
81868e9 |
BuildRequires: pcre2-devel
|
|
|
7d2e1c8 |
%if %{with hdf5}
|
|
|
7d2e1c8 |
BuildRequires: hdf5-devel
|
|
|
7d2e1c8 |
%endif
|
|
|
7d2e1c8 |
%if %{with cgns}
|
|
|
7d2e1c8 |
BuildRequires: cgnslib-devel
|
|
|
7d2e1c8 |
BuildRequires: hdf5-devel
|
|
|
7d2e1c8 |
%endif
|
|
|
ece75dc |
BuildRequires: tcsh
|
|
|
bf2bc91 |
%if %{with tetgen}
|
|
|
bf2bc91 |
BuildRequires: tetgen-devel
|
|
|
bf2bc91 |
%endif
|
|
|
7d2e1c8 |
BuildRequires: xorg-x11-server-Xvfb
|
|
David Abdurachmanov |
52d7cd2 |
%ifarch %{valgrind_arches}
|
|
|
bf2bc91 |
BuildRequires: valgrind-devel
|
|
David Abdurachmanov |
52d7cd2 |
%endif
|
|
|
ece75dc |
|
|
|
ece75dc |
%description
|
|
|
ece75dc |
PETSc, pronounced PET-see (the S is silent), is a suite of data structures
|
|
|
ece75dc |
and routines for the scalable (parallel) solution of scientific applications
|
|
|
ece75dc |
modeled by partial differential equations.
|
|
|
ece75dc |
|
|
|
ece75dc |
%package devel
|
|
|
ece75dc |
Summary: Portable Extensible Toolkit for Scientific Computation (developer files)
|
|
|
ece75dc |
Requires: %{name}%{?_isa} = %{version}-%{release}
|
|
|
d0a20eb |
Requires: gcc-gfortran%{?_isa}
|
|
|
ece75dc |
%description devel
|
|
|
ece75dc |
Portable Extensible Toolkit for Scientific Computation (developer files).
|
|
|
ece75dc |
|
|
|
ece75dc |
%package doc
|
|
|
ece75dc |
Summary: Portable Extensible Toolkit for Scientific Computation (documentation files)
|
|
|
45b8086 |
BuildRequires: python3-sphinx
|
|
|
ece75dc |
BuildArch: noarch
|
|
|
ece75dc |
%description doc
|
|
|
ece75dc |
Portable Extensible Toolkit for Scientific Computation.
|
|
|
ece75dc |
PDF and HTML documentation files.
|
|
|
ece75dc |
|
|
|
ece75dc |
%if %{with arch64}
|
|
|
ece75dc |
%package -n petsc64
|
|
|
ece75dc |
Summary: Portable Extensible Toolkit for Scientific Computation (64bit INTEGER)
|
|
|
6a0cc22 |
%if %{with metis64}
|
|
|
7d2e1c8 |
BuildRequires: metis64-devel >= 5.1.0
|
|
|
7d2e1c8 |
%endif
|
|
|
ece75dc |
|
|
|
ece75dc |
%description -n petsc64
|
|
|
ece75dc |
PETSc, pronounced PET-see (the S is silent), is a suite of data structures
|
|
|
ece75dc |
and routines for the scalable (parallel) solution of scientific applications
|
|
|
ece75dc |
modeled by partial differential equations (64bit INTEGER).
|
|
|
ece75dc |
|
|
|
ece75dc |
%package -n petsc64-devel
|
|
|
ece75dc |
Requires: %{name}64%{?_isa} = %{version}-%{release}
|
|
|
ece75dc |
Requires: gcc-gfortran%{?_isa}
|
|
|
2606434 |
Summary: Portable Extensible Toolkit for Scientific Computation (64bit INTEGER)
|
|
|
ece75dc |
|
|
|
ece75dc |
%description -n petsc64-devel
|
|
|
ece75dc |
Portable Extensible Toolkit for Scientific Computation (developer files)
|
|
|
ece75dc |
(64bit INTEGER).
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
|
|
|
ece75dc |
#############################################################################
|
|
|
ece75dc |
#########
|
|
|
ece75dc |
%if %{with openmpi}
|
|
|
ece75dc |
%package openmpi
|
|
|
ece75dc |
Summary: Portable Extensible Toolkit for Scientific Computation (OpenMPI)
|
|
|
ece75dc |
BuildRequires: openmpi-devel
|
|
|
ece75dc |
%if %{with hdf5}
|
|
|
ece75dc |
BuildRequires: hdf5-openmpi-devel
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
%if %{with cgns}
|
|
|
ece75dc |
BuildRequires: cgnslib-devel
|
|
|
7d2e1c8 |
BuildRequires: hdf5-openmpi-devel
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
%if %{with ptscotch}
|
|
|
ece75dc |
BuildRequires: ptscotch-openmpi-devel
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
%if %{with scalapack}
|
|
|
ece75dc |
BuildRequires: scalapack-openmpi-devel
|
|
|
2eb306a |
%if 0%{?rhel}
|
|
|
ece75dc |
BuildRequires: blacs-openmpi-devel
|
|
|
ece75dc |
%endif
|
|
|
5ed657e |
%endif
|
|
|
ece75dc |
%if %{with mumps}
|
|
|
4cb045c |
BuildRequires: MUMPS-openmpi-devel
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
%if %{with sundials}
|
|
|
ece75dc |
BuildRequires: sundials-openmpi-devel
|
|
|
ece75dc |
%endif
|
|
|
722a325 |
%if %{with superludist}
|
|
|
b9c4a64 |
BuildRequires: superlu_dist-openmpi-devel >= 6.3.0
|
|
|
722a325 |
%endif
|
|
|
ece75dc |
%if %{with fftw}
|
|
|
ece75dc |
BuildRequires: fftw-devel
|
|
|
ece75dc |
BuildRequires: fftw-openmpi-devel
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
%if %{with hypre}
|
|
|
ece75dc |
BuildRequires: hypre-openmpi-devel
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
|
|
|
ece75dc |
%description openmpi
|
|
|
ece75dc |
PETSc, pronounced PET-see (the S is silent), is a suite of data structures
|
|
|
ece75dc |
and routines for the scalable (parallel) solution of scientific applications
|
|
|
ece75dc |
modeled by partial differential equations.
|
|
|
ece75dc |
|
|
|
ece75dc |
%package openmpi-devel
|
|
|
ece75dc |
Summary: Portable Extensible Toolkit for Scientific Computation (OpenMPI)
|
|
|
ece75dc |
Requires: %{name}-openmpi%{?_isa} = %{version}-%{release}
|
|
|
2606434 |
Requires: openmpi-devel%{?_isa} = %{epoch}:%{openmpiversion}
|
|
|
bbef05e |
Requires: hdf5-openmpi-devel%{?_isa}
|
|
|
ece75dc |
%description openmpi-devel
|
|
|
ece75dc |
Portable Extensible Toolkit for Scientific Computation (developer files).
|
|
|
ff23c78 |
|
|
|
ff23c78 |
%if %{with python}
|
|
|
d935acc |
%package -n python3-%{name}-openmpi
|
|
|
ff23c78 |
Summary: Python3 bindings for OpenMPI PETSc
|
|
|
d935acc |
%{?python_provide:%python_provide python3-%{name}-openmpi}
|
|
|
ff23c78 |
|
|
|
d935acc |
BuildRequires: python3-devel
|
|
|
d935acc |
BuildRequires: python3-setuptools
|
|
|
d935acc |
BuildRequires: python3-wheel
|
|
|
ff23c78 |
BuildRequires: hdf5-openmpi-devel
|
|
|
ff23c78 |
BuildRequires: scalapack-openmpi-devel
|
|
|
ff23c78 |
BuildRequires: ptscotch-openmpi-devel
|
|
|
7ca294b |
BuildRequires: python3-numpy
|
|
|
56c2842 |
%if 0%{?rhel}
|
|
|
56c2842 |
BuildRequires: python3-pip
|
|
|
56c2842 |
%else
|
|
|
7ca294b |
BuildRequires: python3-Cython
|
|
|
56c2842 |
%endif
|
|
|
ff23c78 |
Requires: petsc-openmpi%{?_isa}
|
|
|
ff23c78 |
Requires: hdf5-openmpi%{?_isa}
|
|
|
ff23c78 |
Requires: scalapack-openmpi%{?_isa}
|
|
|
ff23c78 |
Requires: ptscotch-openmpi%{?_isa}
|
|
|
2606434 |
Requires: openmpi%{?_isa} = %{epoch}:%{openmpiversion}
|
|
|
ff23c78 |
Requires: MUMPS-openmpi%{?_isa}
|
|
|
ff23c78 |
|
|
|
ff23c78 |
Obsoletes: %{pymodule_name}-openmpi < 0:3.14.0-3
|
|
|
d935acc |
Obsoletes: python3-%{pymodule_name}-openmpi < 0:3.14.0-3
|
|
|
d935acc |
Provides: python3-%{pymodule_name}-openmpi = 0:%{pymodule_version}-%{release}
|
|
|
ff23c78 |
Provides: python-%{pymodule_name}-openmpi = 0:%{pymodule_version}-%{release}
|
|
|
ff23c78 |
Provides: %{pymodule_name}-openmpi = 0:%{pymodule_version}-%{release}
|
|
|
ff23c78 |
|
|
|
d935acc |
%description -n python3-%{name}-openmpi
|
|
|
ff23c78 |
This package provides Python3 bindings for OpenMPI PETSc,
|
|
|
ff23c78 |
the Portable, Extensible Toolkit for Scientific Computation.
|
|
|
6da167f |
%endif
|
|
|
ff23c78 |
%endif
|
|
|
ece75dc |
######
|
|
|
ece75dc |
###############################################################################
|
|
|
ece75dc |
######
|
|
|
ece75dc |
%if %{with mpich}
|
|
|
ece75dc |
%package mpich
|
|
|
ece75dc |
Summary: Portable Extensible Toolkit for Scientific Computation (MPICH)
|
|
|
ece75dc |
BuildRequires: mpich-devel
|
|
|
ece75dc |
%if %{with hdf5}
|
|
|
ece75dc |
BuildRequires: hdf5-mpich-devel
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
%if %{with cgns}
|
|
|
ece75dc |
BuildRequires: cgnslib-devel
|
|
|
7d2e1c8 |
BuildRequires: hdf5-mpich-devel
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
%if %{with ptscotch}
|
|
|
ece75dc |
BuildRequires: ptscotch-mpich-devel
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
%if %{with scalapack}
|
|
|
ece75dc |
BuildRequires: scalapack-mpich-devel
|
|
|
5b88d84 |
%if 0%{?rhel}
|
|
|
ece75dc |
BuildRequires: blacs-mpich-devel
|
|
|
ece75dc |
%endif
|
|
|
5ed657e |
%endif
|
|
|
ece75dc |
%if %{with mumps}
|
|
|
4cb045c |
BuildRequires: MUMPS-mpich-devel
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
%if %{with sundials}
|
|
|
ece75dc |
BuildRequires: sundials-mpich-devel
|
|
|
ece75dc |
%endif
|
|
|
722a325 |
%if %{with superludist}
|
|
|
b9c4a64 |
BuildRequires: superlu_dist-mpich-devel >= 6.3.0
|
|
|
722a325 |
%endif
|
|
|
ece75dc |
%if %{with hypre}
|
|
|
ece75dc |
BuildRequires: hypre-mpich-devel
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
%if %{with fftw}
|
|
|
ece75dc |
BuildRequires: fftw-devel
|
|
|
ece75dc |
BuildRequires: fftw-mpich-devel
|
|
|
ece75dc |
%endif
|
|
|
412a009 |
Requires: mpich%{?_isa} = 0:%{mpichversion}
|
|
|
ece75dc |
|
|
|
ece75dc |
%description mpich
|
|
|
ece75dc |
PETSc, pronounced PET-see (the S is silent), is a suite of data structures
|
|
|
ece75dc |
and routines for the scalable (parallel) solution of scientific applications
|
|
|
ece75dc |
modeled by partial differential equations.
|
|
|
ece75dc |
|
|
|
ece75dc |
%package mpich-devel
|
|
|
ece75dc |
Summary: Portable Extensible Toolkit for Scientific Computation (MPICH)
|
|
|
ece75dc |
Requires: %{name}-mpich%{?_isa} = %{version}-%{release}
|
|
|
bbef05e |
Requires: mpich-devel%{?_isa} = 0:%{mpichversion}
|
|
|
bbef05e |
Requires: hdf5-mpich-devel%{?_isa}
|
|
|
ece75dc |
%description mpich-devel
|
|
|
ece75dc |
Portable Extensible Toolkit for Scientific Computation (developer files).
|
|
|
6da167f |
|
|
|
6da167f |
%if %{with python}
|
|
|
6da167f |
%package -n python3-%{name}-mpich
|
|
|
6da167f |
Summary: Python3 bindings for MPICH PETSc
|
|
|
6da167f |
%{?python_provide:%python_provide python3-%{name}-mpich}
|
|
|
6da167f |
|
|
|
6da167f |
BuildRequires: python3-devel
|
|
|
6da167f |
BuildRequires: python3-setuptools
|
|
|
6da167f |
BuildRequires: python3-wheel
|
|
|
6da167f |
BuildRequires: hdf5-mpich-devel
|
|
|
6da167f |
BuildRequires: scalapack-mpich-devel
|
|
|
6da167f |
BuildRequires: ptscotch-mpich-devel
|
|
|
6da167f |
BuildRequires: python3-numpy
|
|
|
56c2842 |
%if 0%{?rhel}
|
|
|
56c2842 |
BuildRequires: python3-pip
|
|
|
56c2842 |
%else
|
|
|
6da167f |
BuildRequires: python3-Cython
|
|
|
56c2842 |
%endif
|
|
|
6da167f |
Requires: petsc-mpich%{?_isa}
|
|
|
6da167f |
Requires: hdf5-mpich%{?_isa}
|
|
|
6da167f |
Requires: scalapack-mpich%{?_isa}
|
|
|
6da167f |
Requires: ptscotch-mpich%{?_isa}
|
|
|
6da167f |
Requires: mpich%{?_isa} = 0:%{mpichversion}
|
|
|
6da167f |
Requires: MUMPS-mpich%{?_isa}
|
|
|
6da167f |
|
|
|
6da167f |
Obsoletes: %{pymodule_name}-mpich < 0:3.14.0-3
|
|
|
6da167f |
Obsoletes: python3-%{pymodule_name}-mpich < 0:3.14.0-3
|
|
|
6da167f |
Provides: python3-%{pymodule_name}-mpich = 0:%{pymodule_version}-%{release}
|
|
|
6da167f |
Provides: python-%{pymodule_name}-mpich = 0:%{pymodule_version}-%{release}
|
|
|
6da167f |
Provides: %{pymodule_name}-mpich = 0:%{pymodule_version}-%{release}
|
|
|
6da167f |
|
|
|
6da167f |
%description -n python3-%{name}-mpich
|
|
|
6da167f |
This package provides Python3 bindings for MPICH PETSc,
|
|
|
6da167f |
the Portable, Extensible Toolkit for Scientific Computation.
|
|
|
6da167f |
%endif
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
######
|
|
|
ece75dc |
#############################################################################
|
|
|
ece75dc |
|
|
|
ece75dc |
%prep
|
|
|
9d99770 |
%setup -qc
|
|
|
c8de033 |
|
|
|
d293ecb |
%if %{with python}
|
|
|
d408b4b |
rm -rf %{name}-%{version}/src/binding/petsc4py/src/*.egg-info
|
|
|
ac5eaf3 |
|
|
|
2eb306a |
%if 0%{?fedora}
|
|
|
2eb306a |
for i in `find . -name 'setup.py' -o -name 'configure' -o -name '*.py'`; do
|
|
|
2eb306a |
%py3_shebang_fix $i
|
|
|
2eb306a |
done
|
|
|
2eb306a |
%endif
|
|
|
d293ecb |
%endif
|
|
|
ece75dc |
|
|
|
ece75dc |
pushd %{name}-%{version}
|
|
|
2eb306a |
%patch -P 7 -p1 -b .backup
|
|
|
d408b4b |
popd
|
|
|
3386a9b |
|
|
|
d408b4b |
# Remove pregenerated Cython C sources
|
|
|
d408b4b |
pushd %{name}-%{version}
|
|
|
0ef5b08 |
rm -vf $(grep -rl '/\* Generated by Cython')
|
|
|
ece75dc |
popd
|
|
|
ece75dc |
|
|
|
ece75dc |
%if %{with arch64}
|
|
|
ece75dc |
cp -a %{name}-%{version} build64
|
|
|
ece75dc |
pushd build64
|
|
|
2eb306a |
%patch -P 1 -p0
|
|
|
680bb22 |
%if %{with metis64}
|
|
|
2eb306a |
%patch -P 4 -p1 -b .metis64
|
|
|
680bb22 |
%endif
|
|
|
ece75dc |
popd
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
|
|
|
0db6a03 |
pushd %{name}-%{version}
|
|
|
2eb306a |
%patch -P 0 -p0 -b .backup
|
|
|
2eb306a |
%patch -P 6 -p1 -b .backup
|
|
|
0db6a03 |
popd
|
|
|
0db6a03 |
|
|
|
ece75dc |
%if %{with openmpi}
|
|
|
ece75dc |
cp -a %{name}-%{version} buildopenmpi_dir
|
|
|
56c2842 |
%if 0%{?rhel}
|
|
|
56c2842 |
cp %{SOURCE1} buildopenmpi_dir/src/binding/petsc4py/src/petsc4py/PETSc.c
|
|
|
56c2842 |
cp %{SOURCE2} buildopenmpi_dir/src/binding/petsc4py/src/petsc4py/PETSc.h
|
|
|
56c2842 |
cp %{SOURCE3} buildopenmpi_dir/src/binding/petsc4py/src/petsc4py/PETSc_api.h
|
|
|
56c2842 |
%endif
|
|
|
ece75dc |
%endif
|
|
|
d408b4b |
|
|
|
ece75dc |
%if %{with mpich}
|
|
|
ece75dc |
cp -a %{name}-%{version} buildmpich_dir
|
|
|
56c2842 |
%if 0%{?rhel}
|
|
|
56c2842 |
cp %{SOURCE1} buildmpich_dir/src/binding/petsc4py/src/petsc4py/PETSc.c
|
|
|
56c2842 |
cp %{SOURCE2} buildmpich_dir/src/binding/petsc4py/src/petsc4py/PETSc.h
|
|
|
56c2842 |
cp %{SOURCE3} buildmpich_dir/src/binding/petsc4py/src/petsc4py/PETSc_api.h
|
|
|
56c2842 |
%endif
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
|
|
|
7d2e1c8 |
# Do NOT move up this patch
|
|
|
7d2e1c8 |
pushd %{name}-%{version}
|
|
|
2eb306a |
%patch -P 3 -p1 -b .backup
|
|
|
7d2e1c8 |
popd
|
|
|
7d2e1c8 |
|
|
|
ece75dc |
%build
|
|
|
ece75dc |
pushd %{name}-%{version}
|
|
|
9d9cb3d |
%configure --with-cc=gcc --with-cxx=g++ --with-fc=gfortran \
|
|
|
7d2e1c8 |
%{petsc_build_options} \
|
|
|
680bb22 |
--with-64-bit-indices=0 \
|
|
|
ece75dc |
%if %{with blas}
|
|
|
c3687f5 |
%if 0%{?fedora} || 0%{?rhel} >= 9
|
|
|
6a0cc22 |
--with-blaslapack=1 --with-blaslapack-lib=-l%{blaslib}%{blasvar} --with-blaslapack-include=%{_includedir}/%{blaslib} \
|
|
|
6a0cc22 |
%else
|
|
|
6a0cc22 |
--with-openblas=1 --with-openblas-lib=-l%{blaslib}%{blasvar} --with-openblas-include=%{_includedir}/%{blaslib} \
|
|
|
6a0cc22 |
%endif
|
|
|
ece75dc |
%endif
|
|
|
680bb22 |
%if %{with metis}
|
|
|
6a0cc22 |
--with-metis=1 \
|
|
|
680bb22 |
%endif
|
|
|
bf2bc91 |
%if %{with tetgen}
|
|
|
bf2bc91 |
--with-tetgen=1 \
|
|
|
bf2bc91 |
--with-tetgen-lib=-ltetgen \
|
|
|
bf2bc91 |
%endif
|
|
|
6a0cc22 |
%if %{with superlu}
|
|
|
6a0cc22 |
--with-superlu=1 \
|
|
|
6a0cc22 |
--with-superlu-include=%{_includedir}/SuperLU \
|
|
|
6a0cc22 |
--with-superlu-lib=-lsuperlu \
|
|
|
ece75dc |
%endif
|
|
|
7d2e1c8 |
%if %{with suitesparse}
|
|
|
ece75dc |
--with-suitesparse=1 \
|
|
|
ece75dc |
--with-suitesparse-include=%{_includedir}/suitesparse \
|
|
|
7d2e1c8 |
--with-suitesparse-lib="-lumfpack -lklu -lcholmod -lamd"
|
|
|
03de112 |
%endif
|
|
|
6c55a29 |
#cat config.log && exit 1
|
|
|
9d9cb3d |
##
|
|
|
ece75dc |
|
|
|
ece75dc |
RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
|
|
|
ece75dc |
make \
|
|
|
ece75dc |
V=1 MAKE_NP=$RPM_BUILD_NCPUS PETSC_DIR=%{_builddir}/%{name}-%{version}/%{name}-%{version} PETSC_ARCH=%{_arch} all
|
|
|
ece75dc |
popd
|
|
|
ece75dc |
|
|
|
ece75dc |
%if %{with arch64}
|
|
|
ece75dc |
pushd build64
|
|
|
9d9cb3d |
%configure --with-cc=gcc --with-cxx=g++ --with-fc=gfortran \
|
|
|
7d2e1c8 |
%{petsc_build_options} \
|
|
|
ece75dc |
--with-64-bit-indices=1 \
|
|
|
680bb22 |
%if %{with metis64}
|
|
|
6a0cc22 |
--with-metis=1 \
|
|
|
680bb22 |
%endif
|
|
|
ece75dc |
%if %{with blas64}
|
|
|
c3687f5 |
%if 0%{?fedora} || 0%{?rhel} >= 9
|
|
|
6a0cc22 |
--with-blaslapack=1 --with-blaslapack-lib=-l%{blaslib}%{blasvar}64 --with-blaslapack-include=%{_includedir}/%{blaslib} \
|
|
|
6a0cc22 |
%else
|
|
|
6a0cc22 |
--with-openblas=1 --with-openblas-lib=-l%{blaslib}%{blasvar}64 --with-openblas-include=%{_includedir}/%{blaslib} \
|
|
|
6a0cc22 |
%endif
|
|
|
ece75dc |
%endif
|
|
|
7d2e1c8 |
%if %{with suitesparse64}
|
|
|
7d2e1c8 |
--with-suitesparse=1 \
|
|
|
7d2e1c8 |
--with-suitesparse-include=%{_includedir}/suitesparse \
|
|
|
7d2e1c8 |
--with-suitesparse-lib="-lumfpack64 -lklu64 -lcholmod64 -lamd64"
|
|
|
7d2e1c8 |
%endif
|
|
|
7d2e1c8 |
##
|
|
|
ece75dc |
|
|
|
ece75dc |
RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
|
|
|
ece75dc |
make \
|
|
|
ece75dc |
V=1 MAKE_NP=$RPM_BUILD_NCPUS PETSC_DIR=%{_builddir}/%{name}-%{version}/build64 PETSC_ARCH=%{_arch} all
|
|
|
ece75dc |
popd
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
|
|
|
ece75dc |
%if %{with openmpi}
|
|
|
d408b4b |
cd buildopenmpi_dir
|
|
|
9d9cb3d |
|
|
|
ece75dc |
%{_openmpi_load}
|
|
|
b9c4a64 |
export CC=mpicc
|
|
|
b9c4a64 |
export CXX=mpic++
|
|
|
b9c4a64 |
export FC=mpifort
|
|
|
b9c4a64 |
%configure --with-cc=mpicc --with-cxx=mpic++ --with-fc=mpifort \
|
|
|
7d2e1c8 |
--FC_LINKER_FLAGS="$LDFLAGS -lgfortran -lmpi_mpifh" \
|
|
|
eada8e5 |
--LIBS=" -lmpi -lmpi_mpifh" \
|
|
|
7d2e1c8 |
%{petsc_mpibuild_options} \
|
|
|
680bb22 |
%if %{with metis}
|
|
|
6a0cc22 |
--with-metis=1 \
|
|
|
33d889a |
%endif
|
|
|
e01023b |
%if %{?__isa_bits:%{__isa_bits}}%{!?__isa_bits:32} == 64
|
|
|
680bb22 |
--with-64-bit-indices=0 \
|
|
|
e01023b |
%endif
|
|
|
ece75dc |
%if %{with blas}
|
|
|
c3687f5 |
%if 0%{?fedora} || 0%{?rhel} >= 9
|
|
|
6a0cc22 |
--with-blaslapack=1 --with-blaslapack-lib=-l%{blaslib}%{blasvar} --with-blaslapack-include=%{_includedir}/%{blaslib} \
|
|
|
6a0cc22 |
%else
|
|
|
6a0cc22 |
--with-openblas=1 --with-openblas-lib=-l%{blaslib}%{blasvar} --with-openblas-include=%{_includedir}/%{blaslib} \
|
|
|
6a0cc22 |
%endif
|
|
|
ece75dc |
%endif
|
|
|
2c137ab |
#cat config.log
|
|
|
2c137ab |
#exit 1
|
|
|
ece75dc |
|
|
|
ece75dc |
RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
|
|
|
ece75dc |
make \
|
|
|
ece75dc |
V=1 MAKE_NP=$RPM_BUILD_NCPUS PETSC_DIR=%{_builddir}/%{name}-%{version}/buildopenmpi_dir PETSC_ARCH=%{_arch} all
|
|
|
d293ecb |
|
|
|
ff23c78 |
%if %{with python}
|
|
|
d408b4b |
pushd src/binding/petsc4py
|
|
|
ff23c78 |
export PETSC_ARCH=%{_arch}
|
|
|
d408b4b |
export PETSC_DIR=../../../
|
|
|
ff23c78 |
%py3_build
|
|
|
ff23c78 |
unset PETSC_ARCH
|
|
|
ff23c78 |
unset PETSC_DIR
|
|
|
d408b4b |
popd
|
|
|
ff23c78 |
%endif
|
|
|
ff23c78 |
|
|
|
ece75dc |
%{_openmpi_unload}
|
|
|
d408b4b |
cd ..
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
|
|
|
ece75dc |
%if %{with mpich}
|
|
|
d408b4b |
cd buildmpich_dir
|
|
|
5ed657e |
|
|
|
ece75dc |
%{_mpich_load}
|
|
|
b9c4a64 |
export CC=mpicc
|
|
|
b9c4a64 |
export CXX=mpic++
|
|
|
b9c4a64 |
export FC=mpifort
|
|
|
b9c4a64 |
%configure --with-cc=mpicc --with-cxx=mpic++ --with-fc=mpifort \
|
|
|
eada8e5 |
--FC_LINKER_FLAGS="$LDFLAGS -lgfortran -lfmpich -lmpichf90" \
|
|
|
eada8e5 |
--LIBS=" -lmpich -lfmpich -lmpichf90" \
|
|
|
7d2e1c8 |
%{petsc_mpibuild_options} \
|
|
|
680bb22 |
%if %{with metis}
|
|
|
6a0cc22 |
--with-metis=1 \
|
|
|
33d889a |
%endif
|
|
|
e01023b |
%if %{?__isa_bits:%{__isa_bits}}%{!?__isa_bits:32} == 64
|
|
|
680bb22 |
--with-64-bit-indices=0 \
|
|
|
e01023b |
%endif
|
|
|
ece75dc |
%if %{with blas}
|
|
|
c3687f5 |
%if 0%{?fedora} || 0%{?rhel} >= 9
|
|
|
6a0cc22 |
--with-blaslapack=1 --with-blaslapack-lib=-l%{blaslib}%{blasvar} --with-blaslapack-include=%{_includedir}/%{blaslib} \
|
|
|
6a0cc22 |
%else
|
|
|
6a0cc22 |
--with-openblas=1 --with-openblas-lib=-l%{blaslib}%{blasvar} --with-openblas-include=%{_includedir}/%{blaslib} \
|
|
|
6a0cc22 |
%endif
|
|
|
ece75dc |
%endif
|
|
|
2c137ab |
#cat config.log
|
|
|
2c137ab |
#exit 1
|
|
|
ece75dc |
|
|
|
ece75dc |
RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
|
|
|
ece75dc |
make \
|
|
|
ece75dc |
V=1 MAKE_NP=$RPM_BUILD_NCPUS PETSC_DIR=%{_builddir}/%{name}-%{version}/buildmpich_dir PETSC_ARCH=%{_arch} all
|
|
|
d293ecb |
|
|
|
ff23c78 |
%if %{with python}
|
|
|
d408b4b |
pushd src/binding/petsc4py
|
|
|
ff23c78 |
export PETSC_ARCH=%{_arch}
|
|
|
d408b4b |
export PETSC_DIR=../../../
|
|
|
ff23c78 |
%py3_build
|
|
|
ff23c78 |
unset PETSC_ARCH
|
|
|
ff23c78 |
unset PETSC_DIR
|
|
|
d408b4b |
popd
|
|
|
ff23c78 |
%endif
|
|
|
d293ecb |
|
|
|
ece75dc |
%{_mpich_unload}
|
|
|
d408b4b |
cd ..
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
|
|
|
ece75dc |
%install
|
|
|
ece75dc |
pushd %{name}-%{version}
|
|
|
ff23c78 |
mkdir -p %{buildroot}%{_libdir} %{buildroot}%{_includedir}/%{name}
|
|
|
ff23c78 |
mkdir -p %{buildroot}%{_fmoddir}/%{name}
|
|
|
ff23c78 |
mkdir -p %{buildroot}%{_libdir}/%{name}/conf
|
|
|
ff23c78 |
|
|
|
ff23c78 |
install -pm 755 %{_arch}/lib/libpetsc.* %{buildroot}%{_libdir}
|
|
|
ff23c78 |
ln -sf libpetsc.so.%{version} %{buildroot}%{_libdir}/libpetsc.so
|
|
|
ff23c78 |
ln -sf libpetsc.so.%{version} %{buildroot}%{_libdir}/libpetsc.so.%{releasever}
|
|
|
5cba6bd |
ln -sf libpetsc.so.%{version} %{buildroot}%{_libdir}/libpetsc.so.%{majorver}
|
|
|
ff23c78 |
|
|
|
ff23c78 |
install -pm 644 %{_arch}/include/*.h %{buildroot}%{_includedir}/%{name}/
|
|
|
ff23c78 |
install -pm 644 %{_arch}/include/*.mod %{buildroot}%{_fmoddir}/%{name}/
|
|
|
ff23c78 |
cp -a include/* %{buildroot}%{_includedir}/%{name}/
|
|
|
ff23c78 |
|
|
|
ff23c78 |
cp -a %{_arch}/lib/pkgconfig %{buildroot}%{_libdir}/
|
|
|
bbef05e |
sed -e 's|${prefix}/lib|${prefix}/%{_lib}|g' -i %{buildroot}%{_libdir}/pkgconfig/PETSc.pc
|
|
|
0720cfd |
ln -fs %{_libdir}/pkgconfig/PETSc.pc %{buildroot}%{_libdir}/pkgconfig/petsc.pc
|
|
|
ff23c78 |
|
|
|
ff23c78 |
install -pm 644 %{_arch}/lib/petsc/conf/petscrules %{buildroot}%{_libdir}/%{name}/conf/
|
|
|
ff23c78 |
install -pm 644 %{_arch}/lib/petsc/conf/petscvariables %{buildroot}%{_libdir}/%{name}/conf/
|
|
|
ff23c78 |
install -pm 644 lib/petsc/conf/rules %{buildroot}%{_libdir}/%{name}/conf/
|
|
|
ff23c78 |
install -pm 644 lib/petsc/conf/variables %{buildroot}%{_libdir}/%{name}/conf/
|
|
|
ff23c78 |
sed -e 's|%{_builddir}/%{name}-%{version}/%{name}-%{version}|%{_prefix}|g' -i %{buildroot}%{_libdir}/%{name}/conf/petscvariables
|
|
|
ff23c78 |
sed -e 's|%{_builddir}/%{name}-%{version}/%{name}-%{version}/%{_arch}/|%{_prefix}|g' -i %{buildroot}%{_libdir}/%{name}/conf/petscvariables
|
|
|
ff23c78 |
sed -e 's|-L%{_prefix}/%{_arch}/lib|-L%{_libdir}|g' -i %{buildroot}%{_libdir}/%{name}/conf/petscvariables
|
|
|
ff23c78 |
sed -e 's|-I%{_prefix}/%{_arch}/include|-I%{_includedir}/%{name} -I%{_fmoddir}/%{name}|g' -i %{buildroot}%{_libdir}/%{name}/conf/petscvariables
|
|
|
4a1a74e |
sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|%{_libdir}|g' -i %{buildroot}%{_libdir}/%{name}/conf/variables
|
|
|
4a1a74e |
sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|%{_libdir}|g' -i %{buildroot}%{_libdir}/%{name}/conf/rules
|
|
|
4a1a74e |
sed -e 's|${PETSC_DIR}|%{_prefix}|g' -i %{buildroot}%{_libdir}/%{name}/conf/petscrules
|
|
|
4a1a74e |
sed -e 's|${PETSC_DIR}|%{_prefix}|g' -i %{buildroot}%{_libdir}/%{name}/conf/petscvariables
|
|
|
ece75dc |
popd
|
|
|
ece75dc |
|
|
|
ece75dc |
%if %{with arch64}
|
|
|
ece75dc |
pushd build64
|
|
|
ff23c78 |
mkdir -p %{buildroot}%{_libdir} %{buildroot}%{_includedir}/%{name}64
|
|
|
ff23c78 |
mkdir -p %{buildroot}%{_fmoddir}/%{name}64
|
|
|
ff23c78 |
mkdir -p %{buildroot}%{_libdir}/%{name}64/conf
|
|
|
ff23c78 |
mkdir -p %{buildroot}%{_libdir}/pkgconfig
|
|
|
ff23c78 |
|
|
|
ff23c78 |
install -pm 755 %{_arch}/lib/libpetsc64.* %{buildroot}%{_libdir}
|
|
|
ff23c78 |
ln -sf libpetsc64.so.%{version} %{buildroot}%{_libdir}/libpetsc64.so
|
|
|
ff23c78 |
ln -sf libpetsc64.so.%{version} %{buildroot}%{_libdir}/libpetsc64.so.%{releasever}
|
|
|
5cba6bd |
ln -sf libpetsc64.so.%{version} %{buildroot}%{_libdir}/libpetsc64.so.%{majorver}
|
|
|
ff23c78 |
|
|
|
ff23c78 |
install -pm 644 %{_arch}/include/*.h %{buildroot}%{_includedir}/%{name}64/
|
|
|
ff23c78 |
install -pm 644 %{_arch}/include/*.mod %{buildroot}%{_fmoddir}/%{name}64/
|
|
|
ff23c78 |
cp -a include/* %{buildroot}%{_includedir}/%{name}64/
|
|
|
ff23c78 |
|
|
|
ff23c78 |
cp -p %{_arch}/lib/pkgconfig/PETSc.pc %{buildroot}%{_libdir}/pkgconfig/PETSc64.pc
|
|
|
ff23c78 |
cp -p %{_arch}/lib/pkgconfig/PETSc.pc %{buildroot}%{_libdir}/pkgconfig/petsc64.pc
|
|
|
bbef05e |
sed -e 's|${prefix}/lib|${prefix}/%{_lib}|g' -i %{buildroot}%{_libdir}/pkgconfig/PETSc64.pc
|
|
|
bbef05e |
sed -e 's|${prefix}/lib|${prefix}/%{_lib}|g' -i %{buildroot}%{_libdir}/pkgconfig/petsc64.pc
|
|
|
ff23c78 |
|
|
|
ff23c78 |
install -pm 644 %{_arch}/lib/petsc/conf/petscrules %{buildroot}%{_libdir}/%{name}64/conf/
|
|
|
ff23c78 |
install -pm 644 %{_arch}/lib/petsc/conf/petscvariables %{buildroot}%{_libdir}/%{name}64/conf/
|
|
|
ff23c78 |
install -pm 644 lib/petsc/conf/rules %{buildroot}%{_libdir}/%{name}64/conf/
|
|
|
ff23c78 |
install -pm 644 lib/petsc/conf/variables %{buildroot}%{_libdir}/%{name}64/conf/
|
|
|
ff23c78 |
sed -e 's|%{_builddir}/%{name}-%{version}/build64|%{_prefix}|g' -i %{buildroot}%{_libdir}/%{name}64/conf/petscvariables
|
|
|
ff23c78 |
sed -e 's|%{_builddir}/%{name}-%{version}/build64/%{_arch}/|%{_prefix}|g' -i %{buildroot}%{_libdir}/%{name}64/conf/petscvariables
|
|
|
ff23c78 |
sed -e 's|-L%{_prefix}/%{_arch}/lib|-L%{_libdir}|g' -i %{buildroot}%{_libdir}/%{name}64/conf/petscvariables
|
|
|
ff23c78 |
sed -e 's|-I%{_prefix}/%{_arch}/include/|-I%{_includedir}/%{name}64 -I%{_fmoddir}/%{name}64|g' -i %{buildroot}%{_libdir}/%{name}64/conf/petscvariables
|
|
|
4a1a74e |
sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|%{_libdir}|g' -i %{buildroot}%{_libdir}/%{name}64/conf/variables
|
|
|
4a1a74e |
sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|%{_libdir}|g' -i %{buildroot}%{_libdir}/%{name}64/conf/rules
|
|
|
4a1a74e |
sed -e 's|${PETSC_DIR}|%{_prefix}|g' -i %{buildroot}%{_libdir}/%{name}/conf/petscrules
|
|
|
4a1a74e |
sed -e 's|${PETSC_DIR}|%{_prefix}|g' -i %{buildroot}%{_libdir}/%{name}/conf/petscvariables
|
|
|
ece75dc |
popd
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
|
|
|
ece75dc |
%if %{with openmpi}
|
|
|
ece75dc |
pushd buildopenmpi_dir
|
|
|
722a325 |
%{_openmpi_load}
|
|
|
ff23c78 |
mkdir -p %{buildroot}$MPI_LIB %{buildroot}$MPI_INCLUDE/%{name}
|
|
|
ff23c78 |
mkdir -p %{buildroot}$MPI_FORTRAN_MOD_DIR/%{name}
|
|
|
ff23c78 |
mkdir -p %{buildroot}$MPI_LIB/%{name}/conf
|
|
|
ff23c78 |
|
|
|
ff23c78 |
install -pm 755 %{_arch}/lib/libpetsc.* %{buildroot}$MPI_LIB
|
|
|
ff23c78 |
ln -sf libpetsc.so.%{version} %{buildroot}$MPI_LIB/libpetsc.so
|
|
|
ff23c78 |
ln -sf libpetsc.so.%{version} %{buildroot}$MPI_LIB/libpetsc.so.%{releasever}
|
|
|
5cba6bd |
ln -sf libpetsc.so.%{version} %{buildroot}$MPI_LIB/libpetsc.so.%{majorver}
|
|
|
ff23c78 |
|
|
|
ff23c78 |
install -pm 644 %{_arch}/include/*.h %{buildroot}$MPI_INCLUDE/%{name}/
|
|
|
ff23c78 |
install -pm 644 %{_arch}/include/*.mod %{buildroot}$MPI_FORTRAN_MOD_DIR/%{name}/
|
|
|
ff23c78 |
cp -a include/* %{buildroot}$MPI_INCLUDE/%{name}/
|
|
|
ff23c78 |
|
|
|
ff23c78 |
cp -a %{_arch}/lib/pkgconfig %{buildroot}$MPI_LIB/
|
|
|
ff23c78 |
sed -e 's|-I${includedir}/petsc|-I%{_includedir}/openmpi-%{_arch}/petsc|g' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
|
|
|
ff23c78 |
sed -e 's|-L${libdir}|-L%{_libdir}/openmpi/lib|g' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
|
|
|
ff23c78 |
sed -e 's|ldflag_rpath=-L|ldflag_rpath=-L%{_libdir}/openmpi/lib|g' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
|
|
|
bf2bc91 |
sed -e 's|-lpetsc|-lpetsc -lhdf5|' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
|
|
|
bbef05e |
sed -e 's|${prefix}/lib|${prefix}/%{_lib}/openmpi/lib|g' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
|
|
|
0720cfd |
ln -fs $MPI_LIB/pkgconfig/PETSc.pc %{buildroot}$MPI_LIB/pkgconfig/petsc.pc
|
|
|
ff23c78 |
|
|
|
ff23c78 |
install -pm 644 %{_arch}/lib/petsc/conf/petscrules %{buildroot}$MPI_LIB/%{name}/conf/
|
|
|
ff23c78 |
install -pm 644 %{_arch}/lib/petsc/conf/petscvariables %{buildroot}$MPI_LIB/%{name}/conf/
|
|
|
ff23c78 |
install -pm 644 lib/petsc/conf/rules %{buildroot}$MPI_LIB/%{name}/conf/
|
|
|
ff23c78 |
install -pm 644 lib/petsc/conf/variables %{buildroot}$MPI_LIB/%{name}/conf/
|
|
|
ff23c78 |
sed -e 's|%{_builddir}/%{name}-%{version}/buildopenmpi_dir|%{_prefix}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
|
|
|
ff23c78 |
sed -e 's|%{_builddir}/%{name}-%{version}/buildopenmpi_dir/%{_arch}/|%{_prefix}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
|
|
|
ff23c78 |
sed -e 's|-L%{_prefix}/%{_arch}/lib|-L%{_libdir}/openmpi/lib|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
|
|
|
ff23c78 |
sed -e 's|-I%{_prefix}/%{_arch}/include|-I%{_includedir}/openmpi-%{_arch}/%{name} -I%{_fmoddir}/openmpi/%{name}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
|
|
|
0b5a075 |
sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|%{_libdir}/openmpi/lib|g' -i %{buildroot}$MPI_LIB/%{name}/conf/variables
|
|
|
0b5a075 |
sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|%{_libdir}/openmpi/lib|g' -i %{buildroot}$MPI_LIB/%{name}/conf/rules
|
|
|
4a1a74e |
sed -e 's|${PETSC_DIR}|%{_prefix}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscrules
|
|
|
4a1a74e |
sed -e 's|${PETSC_DIR}|%{_prefix}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
|
|
|
ff23c78 |
|
|
|
ff23c78 |
%if %{with python}
|
|
|
d408b4b |
pushd src/binding/petsc4py
|
|
|
ff23c78 |
export PETSC_ARCH=%{_arch}
|
|
|
d408b4b |
export PETSC_DIR=../../../
|
|
|
d408b4b |
%py3_install -- --verbose
|
|
|
d408b4b |
unset PETSC_ARCH
|
|
|
d408b4b |
unset PETSC_DIR
|
|
|
d408b4b |
popd
|
|
|
ff23c78 |
|
|
|
ff23c78 |
# Install petsc4py files into MPI directories
|
|
|
ff23c78 |
%if 0%{?rhel}
|
|
|
ff23c78 |
MPI_PYTHON3_SITEARCH=%{python3_sitearch}/openmpi
|
|
|
ff23c78 |
%endif
|
|
|
ff23c78 |
|
|
|
ff23c78 |
mkdir -p %{buildroot}$MPI_PYTHON3_SITEARCH
|
|
|
ff23c78 |
cp -a %{buildroot}%{python3_sitearch}/%{pymodule_name} %{buildroot}$MPI_PYTHON3_SITEARCH/
|
|
|
ff23c78 |
rm -rf %{buildroot}%{python3_sitearch}/%{pymodule_name}
|
|
|
ff23c78 |
cp -a %{buildroot}%{python3_sitearch}/%{pymodule_name}-%{pymodule_version}-py%{python3_version}.egg-info %{buildroot}$MPI_PYTHON3_SITEARCH/
|
|
|
ff23c78 |
rm -rf %{buildroot}%{python3_sitearch}/%{pymodule_name}-%{pymodule_version}-py%{python3_version}.egg-info
|
|
|
bf2bc91 |
|
|
|
bf2bc91 |
chrpath -r %{_libdir}/openmpi/lib %{buildroot}$MPI_PYTHON3_SITEARCH/%{pymodule_name}/lib/%{_arch}/*.so
|
|
|
ff23c78 |
%endif
|
|
|
722a325 |
%{_openmpi_unload}
|
|
|
d408b4b |
cd ..
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
|
|
|
ece75dc |
%if %{with mpich}
|
|
|
d408b4b |
cd buildmpich_dir
|
|
|
722a325 |
%{_mpich_load}
|
|
|
ff23c78 |
mkdir -p %{buildroot}$MPI_LIB %{buildroot}$MPI_INCLUDE/%{name}
|
|
|
ff23c78 |
mkdir -p %{buildroot}$MPI_FORTRAN_MOD_DIR/%{name}
|
|
|
ff23c78 |
mkdir -p %{buildroot}$MPI_LIB/%{name}/conf
|
|
|
ff23c78 |
|
|
|
ff23c78 |
install -pm 755 %{_arch}/lib/libpetsc.* %{buildroot}$MPI_LIB
|
|
|
ff23c78 |
ln -sf libpetsc.so.%{version} %{buildroot}$MPI_LIB/libpetsc.so
|
|
|
ff23c78 |
ln -sf libpetsc.so.%{version} %{buildroot}$MPI_LIB/libpetsc.so.%{releasever}
|
|
|
5cba6bd |
ln -sf libpetsc.so.%{version} %{buildroot}$MPI_LIB/libpetsc.so.%{majorver}
|
|
|
ff23c78 |
|
|
|
ff23c78 |
install -pm 644 %{_arch}/include/*.h %{buildroot}$MPI_INCLUDE/%{name}/
|
|
|
ff23c78 |
install -pm 644 %{_arch}/include/*.mod %{buildroot}$MPI_FORTRAN_MOD_DIR/%{name}/
|
|
|
ff23c78 |
cp -a include/* %{buildroot}$MPI_INCLUDE/%{name}/
|
|
|
ff23c78 |
|
|
|
ff23c78 |
cp -a %{_arch}/lib/pkgconfig %{buildroot}$MPI_LIB/
|
|
|
ff23c78 |
sed -e 's|-I${includedir}/petsc|-I%{_includedir}/mpich-%{_arch}/petsc|g' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
|
|
|
ff23c78 |
sed -e 's|-L${libdir}|-L%{_libdir}/mpich/lib|g' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
|
|
|
ff23c78 |
sed -e 's|ldflag_rpath=-L|ldflag_rpath=-L%{_libdir}/mpich/lib|g' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
|
|
|
bf2bc91 |
sed -e 's|-lpetsc|-lpetsc -lhdf5|' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
|
|
|
bbef05e |
sed -e 's|${prefix}/lib|${prefix}/%{_lib}/mpich/lib|g' -i %{buildroot}$MPI_LIB/pkgconfig/PETSc.pc
|
|
|
0720cfd |
ln -fs $MPI_LIB/pkgconfig/PETSc.pc %{buildroot}$MPI_LIB/pkgconfig/petsc.pc
|
|
|
7d2e1c8 |
|
|
|
ff23c78 |
install -pm 644 %{_arch}/lib/petsc/conf/petscrules %{buildroot}$MPI_LIB/%{name}/conf/
|
|
|
ff23c78 |
install -pm 644 %{_arch}/lib/petsc/conf/petscvariables %{buildroot}$MPI_LIB/%{name}/conf/
|
|
|
ff23c78 |
install -pm 644 lib/petsc/conf/rules %{buildroot}$MPI_LIB/%{name}/conf/
|
|
|
ff23c78 |
install -pm 644 lib/petsc/conf/variables %{buildroot}$MPI_LIB/%{name}/conf/
|
|
|
ff23c78 |
sed -e 's|%{_builddir}/%{name}-%{version}/buildmpich_dir|%{_prefix}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
|
|
|
ff23c78 |
sed -e 's|%{_builddir}/%{name}-%{version}/buildmpich_dir/%{_arch}/|%{_prefix}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
|
|
|
ff23c78 |
sed -e 's|-L%{_prefix}/%{_arch}/lib|-L%{_libdir}/mpich/lib|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
|
|
|
ff23c78 |
sed -e 's|-I%{_prefix}/%{_arch}/include|-I%{_includedir}/mpich-%{_arch}/%{name} -I%{_fmoddir}/mpich/%{name}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
|
|
|
0b5a075 |
sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|%{_libdir}/mpich/lib|g' -i %{buildroot}$MPI_LIB/%{name}/conf/variables
|
|
|
0b5a075 |
sed -e 's|${PETSC_DIR}/${PETSC_ARCH}/lib|%{_libdir}/mpich/lib|g' -i %{buildroot}$MPI_LIB/%{name}/conf/rules
|
|
|
4a1a74e |
sed -e 's|${PETSC_DIR}|%{_prefix}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscrules
|
|
|
4a1a74e |
sed -e 's|${PETSC_DIR}|%{_prefix}|g' -i %{buildroot}$MPI_LIB/%{name}/conf/petscvariables
|
|
|
ff23c78 |
|
|
|
ff23c78 |
%if %{with python}
|
|
|
d408b4b |
pushd src/binding/petsc4py
|
|
|
ff23c78 |
export PETSC_ARCH=%{_arch}
|
|
|
d408b4b |
export PETSC_DIR=../../../
|
|
|
d408b4b |
%py3_install -- --verbose
|
|
|
d408b4b |
unset PETSC_ARCH
|
|
|
d408b4b |
unset PETSC_DIR
|
|
|
d408b4b |
popd
|
|
|
d293ecb |
|
|
|
ff23c78 |
# Install petsc4py files into MPI directories
|
|
|
ff23c78 |
%if 0%{?rhel}
|
|
|
ff23c78 |
MPI_PYTHON3_SITEARCH=%{python3_sitearch}/mpich
|
|
|
ff23c78 |
%endif
|
|
|
ff23c78 |
|
|
|
ff23c78 |
mkdir -p %{buildroot}$MPI_PYTHON3_SITEARCH
|
|
|
ff23c78 |
cp -a %{buildroot}%{python3_sitearch}/%{pymodule_name} %{buildroot}$MPI_PYTHON3_SITEARCH/
|
|
|
ff23c78 |
rm -rf %{buildroot}%{python3_sitearch}/%{pymodule_name}
|
|
|
ff23c78 |
cp -a %{buildroot}%{python3_sitearch}/%{pymodule_name}-%{pymodule_version}-py%{python3_version}.egg-info %{buildroot}$MPI_PYTHON3_SITEARCH/
|
|
|
ff23c78 |
rm -rf %{buildroot}%{python3_sitearch}/%{pymodule_name}-%{pymodule_version}-py%{python3_version}.egg-info
|
|
|
bf2bc91 |
|
|
|
bf2bc91 |
chrpath -r %{_libdir}/mpich/lib %{buildroot}$MPI_PYTHON3_SITEARCH/%{pymodule_name}/lib/%{_arch}/*.so
|
|
|
ff23c78 |
%endif
|
|
|
722a325 |
%{_mpich_unload}
|
|
|
d408b4b |
cd ..
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
|
|
|
ece75dc |
# Move html documentation in _pkgdocdir
|
|
|
ff23c78 |
pushd %{buildroot}%{_includedir}
|
|
|
ff23c78 |
mkdir -p %{buildroot}%{_pkgdocdir}/headers
|
|
|
ece75dc |
for i in `find . -name "*.h.html" -type f -print`; do
|
|
|
ff23c78 |
mv $i %{buildroot}%{_pkgdocdir}/headers
|
|
|
ece75dc |
done
|
|
|
ece75dc |
for i in `find . -name "*.html" -type f -print`; do
|
|
|
ff23c78 |
mv $i %{buildroot}%{_pkgdocdir}/headers
|
|
|
ece75dc |
done
|
|
|
ece75dc |
find . -name "Makefile" -type f -print | xargs /bin/rm -f
|
|
|
ece75dc |
popd
|
|
|
ff23c78 |
cp -a %{name}-%{version}/docs/* %{buildroot}%{_pkgdocdir}
|
|
|
ece75dc |
#
|
|
|
ece75dc |
|
|
|
ece75dc |
%check
|
|
|
eada8e5 |
|
|
|
7d2e1c8 |
%if %{with openmpi}
|
|
|
7d2e1c8 |
%{_openmpi_load}
|
|
|
ff23c78 |
%if %{with check}
|
|
|
bf2bc91 |
export LD_LIBRARY_PATH=%{buildroot}$MPI_LIB
|
|
|
7d2e1c8 |
export PETSC_DIR=%{_builddir}/%{name}-%{version}/buildopenmpi_dir
|
|
|
ece75dc |
export PETSC_ARCH=%{_arch}
|
|
|
7d2e1c8 |
export MPI_INTERFACE_HOSTNAME=localhost
|
|
|
eada8e5 |
export OMPI_MCA_btl_base_warn_component_unused=0
|
|
|
8bd9c29 |
export wPETSC_DIR=./
|
|
|
1b5941d |
export DATAFILESPATH=%{_builddir}/%{name}-%{version}/buildopenmpi_dir/share/petsc/datafiles
|
|
|
e4aecf6 |
RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
|
|
|
ece75dc |
%if %{with debug}
|
|
|
ece75dc |
export PETSCVALGRIND_OPTIONS=" --tool=memcheck --leak-check=yes --track-origins=yes"
|
|
|
ec327e9 |
export CFLAGS="-O0 -g -Wl,-z,now -fPIC"
|
|
|
ec327e9 |
export CXXFLAGS="-O0 -g -Wl,-z,now -fPIC"
|
|
|
eada8e5 |
export FFLAGS="-O0 -g -Wl,-z,now -fPIC -I${MPI_FORTRAN_MOD_DIR}"
|
|
|
e4aecf6 |
xvfb-run -a make MAKE_NP=$RPM_BUILD_NCPUS all test -C buildopenmpi_dir V=1 MPIEXEC='%{_builddir}/%{name}-%{version}/buildopenmpi_dir/lib/petsc/bin/petscmpiexec -valgrind'
|
|
|
ab30a7b |
%else
|
|
|
e4aecf6 |
xvfb-run -a make MAKE_NP=$RPM_BUILD_NCPUS all test -C buildopenmpi_dir V=1
|
|
|
7d2e1c8 |
%endif
|
|
|
ff23c78 |
%endif
|
|
|
ff23c78 |
|
|
|
ff23c78 |
%if %{with python}
|
|
|
ff23c78 |
%if %{with pycheck}
|
|
|
51bfda7 |
pushd buildopenmpi_dir/src/binding/petsc4py
|
|
|
ff23c78 |
export PETSC_ARCH=%{_arch}
|
|
|
51bfda7 |
export PETSC_DIR=../../../
|
|
|
ff23c78 |
%if 0%{?rhel}
|
|
|
ff23c78 |
MPI_PYTHON3_SITEARCH=%{python3_sitearch}/openmpi
|
|
|
ff23c78 |
%endif
|
|
|
bf2bc91 |
export PYTHONPATH=%{buildroot}$MPI_PYTHON3_SITEARCH
|
|
|
bf2bc91 |
export LD_LIBRARY_PATH=%{buildroot}$MPI_LIB
|
|
|
ff23c78 |
%{__python3} setup.py test
|
|
|
ff23c78 |
unset PETSC_ARCH
|
|
|
ff23c78 |
unset PETSC_DIR
|
|
|
ff23c78 |
popd
|
|
|
ff23c78 |
%endif
|
|
|
ff23c78 |
%endif
|
|
|
7d2e1c8 |
%{_openmpi_unload}
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
|
|
|
7d2e1c8 |
%if %{with mpich}
|
|
|
7d2e1c8 |
%{_mpich_load}
|
|
|
ff23c78 |
%if %{with check}
|
|
|
7d2e1c8 |
export LD_LIBRARY_PATH=%{_builddir}/%{name}-%{version}/buildmpich_dir/%{_arch}/lib
|
|
|
7d2e1c8 |
export PETSC_DIR=%{_builddir}/%{name}-%{version}/buildmpich_dir
|
|
|
ece75dc |
export PETSC_ARCH=%{_arch}
|
|
|
7d2e1c8 |
export MPI_INTERFACE_HOSTNAME=localhost
|
|
|
eada8e5 |
export OMPI_MCA_btl_base_warn_component_unused=0
|
|
|
8bd9c29 |
export wPETSC_DIR=./
|
|
|
1b5941d |
export DATAFILESPATH=%{_builddir}/%{name}-%{version}/buildmpich_dir/share/petsc/datafiles
|
|
|
e4aecf6 |
RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
|
|
|
ece75dc |
%if %{with debug}
|
|
|
ece75dc |
export PETSCVALGRIND_OPTIONS=" --tool=memcheck --leak-check=yes --track-origins=yes"
|
|
|
ec327e9 |
export CFLAGS="-O0 -g -Wl,-z,now -fPIC"
|
|
|
ec327e9 |
export CXXFLAGS="-O0 -g -Wl,-z,now -fPIC"
|
|
|
eada8e5 |
export FFLAGS="-O0 -g -Wl,-z,now -fPIC -I${MPI_FORTRAN_MOD_DIR}"
|
|
|
e4aecf6 |
xvfb-run -a make MAKE_NP=$RPM_BUILD_NCPUS all test -C buildmpich_dir V=1 MPIEXEC='%{_builddir}/%{name}-%{version}/buildmpich_dir/lib/petsc/bin/petscmpiexec -valgrind'
|
|
|
ab30a7b |
%else
|
|
|
e4aecf6 |
xvfb-run -a make MAKE_NP=$RPM_BUILD_NCPUS all test -C buildmpich_dir V=1
|
|
|
7d2e1c8 |
%endif
|
|
|
ff23c78 |
%endif
|
|
|
ff23c78 |
|
|
|
ff23c78 |
%if %{with python}
|
|
|
ff23c78 |
%if %{with pycheck}
|
|
|
51bfda7 |
pushd buildmpich_dir/src/binding/petsc4py
|
|
|
ff23c78 |
export PETSC_ARCH=%{_arch}
|
|
|
51bfda7 |
export PETSC_DIR=../../../
|
|
|
ff23c78 |
%if 0%{?rhel}
|
|
|
ff23c78 |
MPI_PYTHON3_SITEARCH=%{python3_sitearch}/mpich
|
|
|
ff23c78 |
%endif
|
|
|
bf2bc91 |
export PYTHONPATH=%{buildroot}$MPI_PYTHON3_SITEARCH
|
|
|
bf2bc91 |
export LD_LIBRARY_PATH=%{buildroot}$MPI_LIB
|
|
|
ff23c78 |
%{__python3} setup.py test
|
|
|
ff23c78 |
unset PETSC_ARCH
|
|
|
ff23c78 |
unset PETSC_DIR
|
|
|
ff23c78 |
popd
|
|
|
ff23c78 |
%endif
|
|
|
ff23c78 |
%endif
|
|
|
7d2e1c8 |
%{_mpich_unload}
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
|
|
|
ff23c78 |
%if %{with check}
|
|
|
7d2e1c8 |
export LD_LIBRARY_PATH=%{_libdir}:%{_builddir}/%{name}-%{version}/%{name}-%{version}/%{_arch}/lib
|
|
|
7d2e1c8 |
export PETSC_DIR=%{_builddir}/%{name}-%{version}/%{name}-%{version}
|
|
|
ece75dc |
export PETSC_ARCH=%{_arch}
|
|
|
8bd9c29 |
export wPETSC_DIR=./
|
|
|
1b5941d |
export DATAFILESPATH=%{_builddir}/%{name}-%{version}/%{name}-%{version}/share/petsc/datafiles
|
|
|
e4aecf6 |
RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
|
|
|
ab30a7b |
%if %{with debug}
|
|
|
ab30a7b |
export PETSCVALGRIND_OPTIONS=" --tool=memcheck --leak-check=yes --track-origins=yes"
|
|
|
ec327e9 |
export CFLAGS="-O0 -g -Wl,-z,now -fPIC"
|
|
|
ec327e9 |
export CXXFLAGS="-O0 -g -Wl,-z,now -fPIC"
|
|
|
ec327e9 |
export FFLAGS="-O0 -g -Wl,-z,now -fPIC -I%{_libdir}/gfortran/modules"
|
|
|
e4aecf6 |
xvfb-run -a make MAKE_NP=$RPM_BUILD_NCPUS all test -C %{name}-%{version} V=1 MPIEXEC='%{_builddir}/%{name}-%{version}/%{name}-%{version}/lib/petsc/bin/petscmpiexec -n $RPM_BUILD_NCPUS -valgrind'
|
|
|
ab30a7b |
%else
|
|
|
e4aecf6 |
xvfb-run -a make MAKE_NP=$RPM_BUILD_NCPUS all test -C %{name}-%{version} V=1 MPIEXEC='%{_builddir}/%{name}-%{version}/%{name}-%{version}/lib/petsc/bin/petscmpiexec -n $RPM_BUILD_NCPUS'
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
|
|
|
7d2e1c8 |
%if %{with arch64}
|
|
|
7d2e1c8 |
export LD_LIBRARY_PATH=%{_libdir}:%{_builddir}/%{name}-%{version}/build64/%{_arch}/lib
|
|
|
7d2e1c8 |
export PETSC_DIR=%{_builddir}/%{name}-%{version}/build64
|
|
|
ece75dc |
export PETSC_ARCH=%{_arch}
|
|
|
8bd9c29 |
export wPETSC_DIR=./
|
|
|
1b5941d |
export DATAFILESPATH=%{_builddir}/%{name}-%{version}/build64/share/petsc/datafiles
|
|
|
e4aecf6 |
RPM_BUILD_NCPUS="`%{_bindir}/getconf _NPROCESSORS_ONLN`"
|
|
|
7d2e1c8 |
## 'make test' needs to link against -lpetsc
|
|
|
7d2e1c8 |
## Crude fix:
|
|
|
7d2e1c8 |
ln -s %{_builddir}/%{name}-%{version}/build64/%{_arch}/lib/libpetsc64.so %{_builddir}/%{name}-%{version}/build64/%{_arch}/lib/libpetsc.so
|
|
|
7d2e1c8 |
|
|
|
ab30a7b |
%if %{with debug}
|
|
|
ab30a7b |
export PETSCVALGRIND_OPTIONS=" --tool=memcheck --leak-check=yes --track-origins=yes"
|
|
|
ec327e9 |
export CFLAGS="-O0 -g -Wl,-z,now -fPIC"
|
|
|
ec327e9 |
export CXXFLAGS="-O0 -g -Wl,-z,now -fPIC"
|
|
|
ec327e9 |
export FFLAGS="-O0 -g -Wl,-z,now -fPIC -I%{_libdir}/gfortran/modules"
|
|
|
e4aecf6 |
xvfb-run -a make MAKE_NP=$RPM_BUILD_NCPUS all test -C build64 V=1 MPIEXEC='%{_builddir}/%{name}-%{version}/build64/lib/petsc/bin/petscmpiexec -n $RPM_BUILD_NCPUS -valgrind'
|
|
|
ab30a7b |
%else
|
|
|
e4aecf6 |
xvfb-run -a make MAKE_NP=$RPM_BUILD_NCPUS all test -C build64 V=1 MPIEXEC='%{_builddir}/%{name}-%{version}/build64/lib/petsc/bin/petscmpiexec -n $RPM_BUILD_NCPUS'
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
|
|
|
ece75dc |
%files
|
|
|
ece75dc |
%license %{name}-%{version}/LICENSE
|
|
|
5cba6bd |
%{_libdir}/libpetsc.so.3
|
|
|
5cba6bd |
%{_libdir}/libpetsc.so.%{releasever}
|
|
|
5cba6bd |
%{_libdir}/libpetsc.so.%{version}
|
|
|
ece75dc |
|
|
|
ece75dc |
%files devel
|
|
|
862f4dc |
%{_libdir}/pkgconfig/PETSc.pc
|
|
|
d890f27 |
%{_libdir}/pkgconfig/petsc.pc
|
|
|
fe127f0 |
%{_libdir}/%{name}/
|
|
|
ece75dc |
%{_libdir}/libpetsc.so
|
|
|
ece75dc |
%{_includedir}/%{name}/
|
|
|
d9c67c4 |
%{_fmoddir}/%{name}/
|
|
|
ece75dc |
|
|
|
ece75dc |
%files doc
|
|
|
ece75dc |
%license %{name}-%{version}/LICENSE
|
|
|
ece75dc |
%{_pkgdocdir}/
|
|
|
ece75dc |
|
|
|
ece75dc |
%if %{with arch64}
|
|
|
ece75dc |
%files -n petsc64
|
|
|
ece75dc |
%license build64/LICENSE
|
|
|
5cba6bd |
%{_libdir}/libpetsc64.so.3
|
|
|
5cba6bd |
%{_libdir}/libpetsc64.so.%{releasever}
|
|
|
5cba6bd |
%{_libdir}/libpetsc64.so.%{version}
|
|
|
ece75dc |
|
|
|
ece75dc |
%files -n petsc64-devel
|
|
|
862f4dc |
%{_libdir}/pkgconfig/PETSc64.pc
|
|
|
d890f27 |
%{_libdir}/pkgconfig/petsc64.pc
|
|
|
fe127f0 |
%{_libdir}/%{name}64/
|
|
|
ece75dc |
%{_libdir}/libpetsc64.so
|
|
|
ece75dc |
%{_includedir}/%{name}64/
|
|
|
d9c67c4 |
%{_fmoddir}/%{name}64/
|
|
|
ece75dc |
%endif
|
|
|
ece75dc |
|
|
|
ece75dc |
%if %{with openmpi}
|
|
|
ece75dc |
%files openmpi
|
|
|
ece75dc |
%license buildopenmpi_dir/LICENSE
|
|
|
5cba6bd |
%{_libdir}/openmpi/lib/libpetsc.so.3
|
|
|
9abc8ad |
%{_libdir}/openmpi/lib/libpetsc.so.%{releasever}
|
|
|
5cba6bd |
%{_libdir}/openmpi/lib/libpetsc.so.%{version}
|
|
|
ece75dc |
|
|
|
ece75dc |
%files openmpi-devel
|
|
|
e132ea4 |
%{_libdir}/openmpi/lib/libpetsc.so
|
|
|
fe127f0 |
%{_libdir}/openmpi/lib/%{name}/
|
|
|
862f4dc |
%{_libdir}/openmpi/lib/pkgconfig/PETSc.pc
|
|
|
d890f27 |
%{_libdir}/openmpi/lib/pkgconfig/petsc.pc
|
|
|
e132ea4 |
%{_includedir}/openmpi-%{_arch}/%{name}/
|
|
|
d9c67c4 |
%{_fmoddir}/openmpi/%{name}/
|
|
|
ff23c78 |
|
|
|
ff23c78 |
%if %{with python}
|
|
|
d935acc |
%files -n python3-%{name}-openmpi
|
|
|
ff23c78 |
%{python3_sitearch}/openmpi/%{pymodule_name}/
|
|
|
ff23c78 |
%{python3_sitearch}/openmpi/%{pymodule_name}-%{pymodule_version}-py%{python3_version}.egg-info
|
|
|
ff23c78 |
%endif
|
|
|
0fa32b9 |
%endif
|
|
|
ece75dc |
|
|
|
ece75dc |
%if %{with mpich}
|
|
|
ece75dc |
%files mpich
|
|
|
ece75dc |
%license buildmpich_dir/LICENSE
|
|
|
5cba6bd |
%{_libdir}/mpich/lib/libpetsc.so.3
|
|
|
00b3630 |
%{_libdir}/mpich/lib/libpetsc.so.%{releasever}
|
|
|
5cba6bd |
%{_libdir}/mpich/lib/libpetsc.so.%{version}
|
|
|
ece75dc |
|
|
|
ece75dc |
%files mpich-devel
|
|
|
e132ea4 |
%{_libdir}/mpich/lib/libpetsc.so
|
|
|
fe127f0 |
%{_libdir}/mpich/lib/%{name}/
|
|
|
862f4dc |
%{_libdir}/mpich/lib/pkgconfig/PETSc.pc
|
|
|
d890f27 |
%{_libdir}/mpich/lib/pkgconfig/petsc.pc
|
|
|
e132ea4 |
%{_includedir}/mpich-%{_arch}/%{name}/
|
|
|
d9c67c4 |
%{_fmoddir}/mpich/%{name}/
|
|
|
ff23c78 |
|
|
|
ff23c78 |
%if %{with python}
|
|
|
d935acc |
%files -n python3-%{name}-mpich
|
|
|
ff23c78 |
%{python3_sitearch}/mpich/%{pymodule_name}/
|
|
|
ff23c78 |
%{python3_sitearch}/mpich/%{pymodule_name}-%{pymodule_version}-py%{python3_version}.egg-info
|
|
|
ff23c78 |
%endif
|
|
|
0fa32b9 |
%endif
|
|
|
ece75dc |
|
|
|
ece75dc |
%changelog
|
|
|
68b0545 |
%autochangelog
|