# Polymake intentionally leaves symbols undefined in the plugins, but Fedora's

# hardening flags disable RTLD_LAZY, resulting in undefined symbol errors while

# building the documentation.

%undefine _hardened_build

# In addition, we have to not tell the linker to require all symbols to be

# defined, else the plugin builds fail.

%undefine _strict_symbol_defs_build

# If Singular is broken, use this to build without Singular support.

%bcond_without singular

# Build with the bundled version of jreality.  This currently includes bundled

# versions of several other Java projects (e.g., bsh, janino, jinput), and also

# itextpdf 5.3.2, whose license is problematic.

%bcond_with jreality

Name:           polymake

Version:        3.1

Release:        6%{?dist}

%global polydir %{_libdir}/%{name}

%global majver  %(cut -dr -f1 <<< %{version})

Summary:        Algorithms on convex polytopes and polyhedra

License:        GPLv2+

URL:            http://polymake.org/

Source0:        http://polymake.org/lib/exe/fetch.php/download/%{name}-%{version}.tar.bz2

# Man page written by Jerry James from text found in the sources.  Therefore,

# the copyright and license are the same as for the sources.

Source1:        %{name}.1

# This patch will not be sent upstream, since it is Fedora-specific.  Link

# against existing system libraries instead of building them from source,

# and do not use -rpath.

Patch0:         %{name}-fedora.patch

# Properly detect lrs system bits

Patch1:         %{name}-lrs-system-fix.patch

# Fix detection of LattE

Patch2:         %{name}-latte.patch

# Fix compilation error with gcc 7

Patch3:         %{name}-gcc7.patch

%if %{with jreality}

BuildRequires:  ant

%endif

BuildRequires:  boost-devel

BuildRequires:  cddlib-devel

BuildRequires:  cmake

BuildRequires:  eigen3-static

BuildRequires:  gcc-c++

%if %{with jreality}

BuildRequires:  java-devel

BuildRequires:  jpackage-utils

%endif

BuildRequires:  libnauty-devel

BuildRequires:  libnormaliz-devel

BuildRequires:  libxml2-devel

BuildRequires:  lrslib-devel

BuildRequires:  mpfr-devel

BuildRequires:  perl-devel

BuildRequires:  perl-generators

BuildRequires:  perl(Archive::Tar)

BuildRequires:  perl(ExtUtils::Embed)

BuildRequires:  perl(ExtUtils::MakeMaker)

BuildRequires:  perl(Gtk2)

BuildRequires:  perl(Math::BigInt)

BuildRequires:  perl(Math::Trig)

# Not available on all arches

%ifnarch ppc %{sparc} s390

BuildRequires:  perl(MongoDB)

%endif

BuildRequires:  perl(SVG)

BuildRequires:  perl(Term::ReadKey)

BuildRequires:  perl(Term::ReadLine::Gnu)

BuildRequires:  perl(XML::LibXSLT)

BuildRequires:  perl(XML::SAX::Base)

BuildRequires:  perl(XML::Writer)

BuildRequires:  ppl-devel

BuildRequires:  sympol-devel

BuildRequires:  xhtml1-dtds

%if %{with singular}

BuildRequires:  Singular-devel

%endif

%if %{with jreality}

Requires:       java

Requires:       jpackage-utils

%endif

Requires:       gcc-c++

Requires:       glibc-devel%{?_isa}

Requires:       libgcc%{?_isa}

Requires:       make

Requires:       mpfr-devel

Requires:       perl(:MODULE_COMPAT_%{perl_version})

Requires:       perl-interpreter = 4:%{perl_version}

Requires:       perl(Term::ReadLine::Gnu)

Recommends:     4ti2

Recommends:     azove

Recommends:     gfan

Recommends:     latte-integrale

Recommends:     normaliz

Recommends:     ocaml-tplib-tools

Recommends:     qhull

Recommends:     Singular

Recommends:     TOPCOM

Recommends:     vinci

Suggests:       evince

Suggests:       geomview

Suggests:       graphviz

Suggests:       gv

Suggests:       okular

Suggests:       sketch

# Add some provides the automatic generator missed

Provides:       perl(PolyDB::DatabaseCursor)

Provides:       perl(Polymake::Background)

Provides:       perl(Polymake::Core::RuleFilter)

Provides:       perl(Polymake::Core::ShellHelpers)

Provides:       perl(Polymake::Core::ShellMock)

Provides:       perl(Polymake::Namespaces)

# These can be removed when Fedora 25 reaches EOL

Obsoletes:      %{name}-devel < 3.0r2-5

Provides:       %{name}-devel = %{version}-%{release}

# Don't expose private perl interfaces

%global __provides_exclude perl\\\(Geomview.*\\\)

%global __provides_exclude %{__provides_exclude}|perl\\\(Graphviz.*\\\)

%global __provides_exclude %{__provides_exclude}|perl\\\(Metapost.*\\\)

%global __provides_exclude %{__provides_exclude}|perl\\\(PerlIO.*\\\)

%global __provides_exclude %{__provides_exclude}|perl\\\(Postscript.*\\\)

%global __provides_exclude %{__provides_exclude}|perl\\\(Povray.*\\\)

%global __provides_exclude %{__provides_exclude}|perl\\\(Sketch.*\\\)

%global __provides_exclude %{__provides_exclude}|perl\\\(SplitsTree.*\\\)

%global __provides_exclude %{__provides_exclude}|perl\\\(ThreeJS.*\\\)

%global __provides_exclude %{__provides_exclude}|perl\\\(TikZ.*\\\)

%global __provides_exclude %{__provides_exclude}|perl\\\(Visual.*\\\)

%global __provides_exclude %{__provides_exclude}|perl\\\(application\\\)

%global __provides_exclude %{__provides_exclude}|perl\\\(_.*\\\)

# Exclude private perl interfaces that we don't Provide

%global __requires_exclude perl\\\(Visual::Drawing\\\)

%global __requires_exclude %{__requires_exclude}|perl\\\(Polymake::Test::.*\\\)

%global __requires_exclude %{__requires_exclude}|perl\\\(Polymake::file_utils\.pl\\\)

%global __requires_exclude %{__requires_exclude}|perl\\\(Polymake::regex\.pl\\\)

%global __requires_exclude %{__requires_exclude}|perl\\\(Polymake::utils\.pl\\\)

%global __requires_exclude %{__requires_exclude}|perl\\\(namespaces::.*\\\)

%description

Polymake is a tool to study the combinatorics and the geometry of convex

polytopes and polyhedra.  It is also capable of dealing with simplicial

complexes, matroids, polyhedral fans, graphs, tropical objects, and so

forth.

Polymake can use various computational packages if they are installed.

Those available from Fedora are: 4ti2, azove, gfan, latte-integrale,

normaliz, ocaml-tplib-tools, qhull, Singular, TOPCOM, and vinci.

Polymake can interface with various visualization packages if they are

installed.  Install one or more of the tools from the following list:

evince, geomview, graphviz, gv, and okular.

%if %{with singular}

%package singular

Summary:        Plugin to access Singular from polymake

Requires:       %{name}%{?_isa} = %{version}-%{release}

%description singular

This package contains a polymake plugin that provides access to

Singular.

%endif

%package doc

Summary:        Documentation for %{name}

Requires:       %{name}%{?_isa} = %{version}-%{release}

%description doc

This package contains documentation for %{name}.

%prep

%setup -q -n %{name}-%{majver}

%patch0 -b .fedora

%patch1

%patch2

%patch3

fixtimestamp() {

  touch -r $1.orig $1

  rm -f $1.orig

}

# Adapt to the Fedora version of sympol

sed -i.orig "s|yal/||;s|symmetrygroupconstruction/||" \

    bundled/sympol/apps/polytope/src/sympol_interface.cc

fixtimestamp bundled/sympol/apps/polytope/src/sympol_interface.cc

# Turn off hardening flags derived from perl::Config.  See above.

sed -e '/^\$LDsharedFlags=/a$LDsharedFlags =~ s/ -specs=\\S+//g;' \

    -i support/configure.pl

# Fix "error: -Wformat-security ignored without -Wformat"

sed -i 's/ -Wno-format//' support/configure.pl

# Help polymake find the 4ti2 tools

sed -i.orig "/global variables/i\$ENV{'PATH'} = \"\$ENV{PATH}:%{_libdir}/4ti2/bin\";\n" perl/polymake

touch -r perl/polymake.orig perl/polymake

rm perl/polymake.orig

%ifarch %{arm}

# The ARM builders almost always run out of memory while building polymake.

# Reduce the optimization and debug levels for the problematic file in an

# effort to avoid this.

sed -i '/Local Variables/irel_int_point$O : ExtraCXXFLAGS += -O1 -g1\n' \

  apps/polytope/src/Makefile.inc

%endif

%build

export LC_ALL=C.UTF-8

export CFLAGS="%{optflags} -I%{_includedir}/eigen3 -Wno-unused-local-typedefs -fno-delete-null-pointer-checks"

export CXXFLAGS="$CFLAGS"

export LDFLAGS="$RPM_LD_FLAGS -Wl,--as-needed -ldl"

if [ %{__isa_bits} = "32" ]; then

  LDFLAGS="-Wl,--no-keep-memory -Wl,--reduce-memory-overheads $LDFLAGS"

fi

export Arch=%{_arch}

# NOT an autoconf-generated configure script; do not use %%configure.

./configure --build=%{_arch} --prefix=%{_prefix} --libdir=%{_libdir} \

  --without-native \

%if %{with singular}

  --with-singular=%{_prefix} \

%endif

  --with-lrs-include=%{_includedir}/lrslib/ \

  --with-lrs-lib=%{_libdir} \

  --with-cdd-include=%{_includedir}/cddlib/ \

  --with-cdd-lib=%{_libdir} \

%if %{with jreality}

  --with-java=%{java_home} \

%else

  --without-java \

%endif

  --libexecdir=%{polydir} --without-javaview

# No, really, we can't have the hardening flags on

sed -e 's| -Wl,-z,now||g' \

    -e 's| -specs=/usr/lib/rpm/redhat/redhat-hardened-ld||g' \

    -i build.%{_arch}/conf.make

# FIXME: infrequent failures with %%{?_smp_mflags}

make all

# Help the debuginfo generator find generated files

cd build.%{_arch}

cp -p perlx-*linux-*/CPlusPlus.xxs lib/core/CPlusPlus.xxs

cp -p perlx-*linux-*/CPlusPlus.cc lib/core/CPlusPlus.cc

%install

# Don't recompile the main library with DESTDIR compiled in

sed -i "/conf\.make/d" support/corelib.make

# The release-docs target copies docs to their installed locations

export Arch=%{_arch}

make install release-docs DESTDIR=%{buildroot}

# Install the man page

mkdir -p %{buildroot}%{_mandir}/man1

sed "s/@VERSION@/%{version}/" %{SOURCE1} > %{buildroot}%{_mandir}/man1/%{name}.1

touch -r %{SOURCE1} %{buildroot}%{_mandir}/man1/%{name}.1

# We don't want the documentation in /usr/share/polymake

mv %{buildroot}%{_datadir}/%{name}/doc .

# Remove stuff that shouldn't be installed

rm -fr %{buildroot}%{_datadir}/%{name}/apps/*/src \

  %{buildroot}%{polydir}/perlx/*/*/auto/Polymake/Ext/{.packlist,Ext.bs}

%if ! %{with jreality}

rm -fr %{buildroot}%{_datadir}/%{name}/java_build \

  %{buildroot}%{polydir}/lib/jreality

%endif

# Fix permissions

chmod 0755 %{buildroot}%{_bindir}/*

chmod 0755 %{buildroot}%{_libdir}/lib*

find %{buildroot}%{polydir} -name \*.so | xargs chmod 0755

# Remove the buildroot from configuration files

for fil in %{buildroot}%{polydir}/bundled/*/conf.make; do

  sed -i 's,%{buildroot},,' $fil

done

%ldconfig_scriptlets

%files

%{_bindir}/%{name}

%{_bindir}/%{name}-config

%{_includedir}/%{name}/

%{_mandir}/man1/%{name}.1*

%{_libdir}/lib%{name}*

%{polydir}/

%if %{with singular}

%exclude %{polydir}/bundled/singular/

%endif

%{_datadir}/%{name}/

%if %{with singular}

%files singular

%{polydir}/bundled/singular/

%endif

%files doc

%doc doc/*

%changelog

* Tue Apr 24 2018 Jerry James <loganjerry@gmail.com> - 3.1-6

- Rebuild for perl 5.24.4

* Wed Sep 27 2017 Jitka Plesnikova <jplesnik@redhat.com> - 3.1-5

- Rebuild for perl 5.24.3

* Fri Jul 21 2017 Jerry James <loganjerry@gmail.com> - 3.1-4

- Rebuild for perl 5.24.2

* Mon May 15 2017 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 3.1-3

- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_27_Mass_Rebuild

* Thu Apr  6 2017 Jerry James <loganjerry@gmail.com> - 3.1-2

- Rebuild with Singular support

* Wed Apr  5 2017 Jerry James <loganjerry@gmail.com> - 3.1-1

- New upstream release

* Fri Mar  3 2017 Jerry James <loganjerry@gmail.com> - 3.0r2-8

- Rebuild for ppl 1.2

- Drop -ppl patch

- Add -gcc7 patch to fix FTBFS

- Reduce debug level on 32-bit ARM to try to avoid memory exhaustion

* Sat Feb 11 2017 Fedora Release Engineering <releng@fedoraproject.org> - 3.0r2-7

- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild

* Fri Jan 27 2017 Jonathan Wakely <jwakely@redhat.com> - 3.0r2-6

- Rebuilt for Boost 1.63

* Sat Jan 21 2017 Jerry James <loganjerry@gmail.com> - 3.0r2-5

- Help polymake find the LattE and 4ti2 tools

- Add Requires needed for polymake to compile tools at runtime (bz 1414594)

- Merge polymake-devel into main package, needed to build tools at runtime

- Bring back libpolymake-apps, needed by Singular 4 (bz 1389956)

* Mon Jan 16 2017 Jerry James <loganjerry@gmail.com> - 3.0r2-4

- Rebuild for perl 5.24.1

* Wed Jan 11 2017 Jerry James <loganjerry@gmail.com> - 3.0r2-3

- Add -magic, -ppl, and -endian patches to fix build problems

- Add the option to build with a bundled version of jreality

* Thu Dec 29 2016 Rich Mattes <richmattes@gmail.com> - 3.0r2-3

- Rebuild for eigen3-3.3.1

* Fri Nov  4 2016 Jerry James <loganjerry@gmail.com> - 3.0r2-2

- Do not ship libpolymake-apps (bz 1389956)

- Suggest sketch

* Mon Jul 25 2016 Jerry James <loganjerry@gmail.com> - 3.0r2-1

- New upstream release

* Fri May 27 2016 Jerry James <loganjerry@gmail.com> - 3.0r1-5

- Rebuild for lrslib 062 and sympol 0.1.9

* Tue May 17 2016 Jitka Plesnikova <jplesnik@redhat.com> - 3.0r1-4

- Perl 5.24 rebuild

* Tue May  3 2016 Jerry James <loganjerry@gmail.com> - 3.0r1-3

- Rebuild for perl 5.22.2

* Thu Apr 28 2016 Jerry James <loganjerry@gmail.com> - 3.0r1-2

- Build against nauty instead of bliss

* Tue Apr 12 2016 Jerry James <loganjerry@gmail.com> - 3.0r1-1

- New upstream release

- Add Recommends and Suggests for optional tools

- Bundle libnormaliz for now until the system version can catch up

* Thu Feb 04 2016 Fedora Release Engineering <releng@fedoraproject.org> - 2.14r1-6

- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild

* Fri Jan 15 2016 Jonathan Wakely <jwakely@redhat.com> - 2.14r1-5

- Rebuilt for Boost 1.60

* Tue Dec 15 2015 Jerry James <loganjerry@gmail.com> - 2.14r1-4

- Rebuild for perl 5.22.1

* Fri Dec  4 2015 Jerry James <loganjerry@gmail.com> - 2.14r1-3

- Rebuild for lrslib 061

* Sat Oct  3 2015 Jerry James <loganjerry@gmail.com> - 2.14r1-2

- Fix Requires snafu that made the package uninstallable

* Fri Oct  2 2015 Jerry James <loganjerry@gmail.com> - 2.14r1-1

- The 2.15 branch is not ready; go back to the latest 2.14 release

* Thu Aug 27 2015 Jonathan Wakely <jwakely@redhat.com> - 2.15-0.2.beta2

- Rebuilt for Boost 1.59

* Wed Aug 26 2015 Tom Callaway <spot@fedoraproject.org> - 2.15-0.1.beta2

- update to 2.15-beta2 for newer perl support

* Mon Aug 10 2015 Tom Callaway <spot@fedoraproject.org> - 2.14-1

- update to 2.14

* Wed Jul 29 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.13-26.git20141013

- Rebuilt for https://fedoraproject.org/wiki/Changes/F23Boost159

* Wed Jul 22 2015 David Tardon <dtardon@redhat.com> - 2.13-25.git20141013

- rebuild for Boost 1.58

* Tue Jun 23 2015 Jerry James <loganjerry@gmail.com> - 2.13-24.git20141013

- Add -perl522 patch to fix the build

* Thu Jun 18 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.13-24.git20141013

- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild

* Sat Jun 06 2015 Jitka Plesnikova <jplesnik@redhat.com> - 2.13-23.git20141013

- Perl 5.22 rebuild

- Disable BR Singular-devel

* Mon May 18 2015 Jerry James <loganjerry@gmail.com> - 2.13-22.git20141013

- Rebuild for cddlib 094h

* Sat May 02 2015 Kalev Lember <kalevlember@gmail.com> - 2.13-21.git20141013

- Rebuilt for GCC 5 C++11 ABI change

* Sat Mar  7 2015 Jerry James <loganjerry@gmail.com> - 2.13-20.git20141013

- Rebuild with Singular support

* Fri Mar  6 2015 Jerry James <loganjerry@gmail.com> - 2.13-19.git20141013

- Add -gcc5 patch

- Disable hardening flags, which kill RTLD_LAZY

- Don't try to fix undefined symbols in the plugins anymore

* Thu Mar 05 2015 Jitka Plesnikova <jplesnik@redhat.com> - 2.13-19.git20141013

- Rebuild for perl 5.20.2

* Wed Feb 04 2015 Petr Machata <pmachata@redhat.com> - 2.13-18.git20141013

- Bump for rebuild.

* Mon Feb  2 2015 Jerry James <loganjerry@gmail.com> - 2.13-17.git20141013

- Rebuild for eigen3 3.2.4, lrslib 0.5.1, and normaliz 2.12.2

* Thu Jan 29 2015 Petr Machata <pmachata@redhat.com> - 2.13-16.git20141013

- Rebuild for boost 1.57.0

* Mon Jan 19 2015 Jerry James <loganjerry@gmail.com> - 2.13-15.git20141013

- Add -exit patch to fix crash on exit

* Thu Jan 15 2015 Jerry James <loganjerry@gmail.com> - 2.13-14.git20141013

- Rebuild for eigen3 3.2.3

* Mon Nov 10 2014 Jerry James <loganjerry@gmail.com> - 2.13-13.git20141013

- Rebuild with Singular support

* Mon Nov 10 2014 Jerry James <loganjerry@gmail.com> - 2.13-12.git20141013

- Update to latest perpetual beta snapshot

* Tue Sep 16 2014 Jerry James <loganjerry@gmail.com> - 2.13-11.git20140811

- Rebuild with Singular support

* Tue Sep 16 2014 Jerry James <loganjerry@gmail.com> - 2.13-10.git20140811

- Rebuild for perl 5.20.1

- New -singular subpackage to reduce pain of Singular+polymake updates

* Thu Sep 11 2014 Jerry James <loganjerry@gmail.com> - 2.13-9.git20140811

- Rebuild with Singular support

* Thu Sep 11 2014 Jerry James <loganjerry@gmail.com> - 2.13-8.git20140811

- Update to perpetual beta snapshot that supports perl 5.20 (bz 1139212)

* Fri Aug 29 2014 Jitka Plesnikova <jplesnik@redhat.com> - 2.13-8

- Perl 5.20 rebuild

- Disable BR Singular-devel when perl bootstrapping

* Sun Aug 17 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.13-7

- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild

* Fri Aug  8 2014 Jerry James <loganjerry@gmail.com> - 2.13-6

- Rebuild with Singular support

* Tue Aug  5 2014 Jerry James <loganjerry@gmail.com> - 2.13-5

- Rebuild for libnormaliz 2.11.2 and eigen3 3.2.2

* Sat Jun 07 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.13-4

- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild

* Wed May 28 2014 Jerry James <loganjerry@gmail.com> - 2.13-3

- Rebuild for Singular 3-1-6

- Add configuration workarounds for Singular support

* Fri May 23 2014 Petr Machata <pmachata@redhat.com> - 2.13-2

- Rebuild for boost 1.55.0

* Tue Apr 29 2014 Jerry James <loganjerry@gmail.com> - 2.13-1

- New upstream release: build against rebuilt Singular

* Tue Apr 29 2014 Jerry James <loganjerry@gmail.com> - 2.13-0

- New upstream release: bootstrap build without Singular support

* Wed Apr  2 2014 Jerry James <loganjerry@gmail.com> - 2.12-15.svn20140326

- Update to latest "perpetual beta" for bug fixes

- Add conditional to build without Singular support

* Wed Mar 12 2014 Jerry James <loganjerry@gmail.com> - 2.12-14.svn20131128

- Build with Singular support

- Make transitive dependency on eigen3 (via sympol) explicit

* Sat Jan 18 2014 Jerry James <loganjerry@gmail.com> - 2.12-13.svn20131128

- Update Requires filters

* Fri Jan 17 2014 Jerry James <loganjerry@gmail.com> - 2.12-12.svn20131128

- Update to latest "perpetual beta" for bug fixes

- Enable building new ppl and libnormaliz extensions

* Wed Jan  8 2014 Jerry James <loganjerry@gmail.com> - 2.12-11.svn20130813

- Rebuild for perl 5.18.2

- Add -format patch to fix -Werror=format-security failure

* Wed Aug 14 2013 Jerry James <loganjerry@gmail.com> - 2.12-10.svn20130813

- Update to latest "perpetual beta" for perl 5.18 compatibility (bz 992813)

* Sun Aug 04 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.12-9

- Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild

* Wed Jul 24 2013 Petr Pisar <ppisar@redhat.com> - 2.12-8

- Perl 5.18 rebuild

* Sun Jul 21 2013 Rich Mattes <richmattes@gmail.com> - 2.12-7

- Rebuild for eigen3-3.1.3

* Wed May 15 2013 Jerry James <loganjerry@gmail.com> - 2.12-6

- Require version of perl used to build (bz 963486)

- perl(Term::ReadLine::Gnu) dependency is not autogenerated (bz 963486)

* Wed Mar 20 2013 Jerry James <loganjerry@gmail.com> - 2.12-5

- Add -lrslib patch to fix a segfault (bz 923269)

* Wed Feb 27 2013 Jerry James <loganjerry@gmail.com> - 2.12-4

- Remove rpath and -L%%{_libdir} from polymake-config --ldflags output

* Thu Jan 24 2013 Jerry James <loganjerry@gmail.com> - 2.12-3

- Also need to filter perl(Graphviz)

* Wed Jan 23 2013 Jerry James <loganjerry@gmail.com> - 2.12-2

- Change -libs patch to also remove -rpath arguments

- Filter Provides/Requires to hide private perl interfaces

- Remove the broken check script and explain why

* Thu Jan 10 2013 Jerry James <loganjerry@gmail.com> - 2.12-1

- Initial RPM