%global srcname libNeuroML

%global _description \

This package provides Python libNeuroML, for working with neuronal models \

specified in NeuroML 2 (http://neuroml.org/neuromlv2).  NeuroML provides an \

object model for describing neuronal morphologies, ion channels, synapses and \

3D network structure.  Documentation is available at \

http://readthedocs.org/docs/libneuroml/en/latest/

Name:           python-%{srcname}

Version:        0.2.50

Release:        2%{?dist}

Summary:        Python libNeuroML for working with neuronal models specified in NeuroML

License:        BSD

URL:            http://neuroml.org/

Source0:        https://github.com/NeuralEnsemble/%{srcname}/archive/%{version}/%{name}-%{version}.tar.gz

# These require a mongodb db set up, so we disable them

Patch0:         %{srcname}-0.2.45-disable-mongodb-test.patch

BuildArch:      noarch

%description

%{_description}

%package -n python3-%{srcname}

Summary:        %{summary}

BuildRequires:  python3-devel

BuildRequires:  %{py3_dist lxml}

BuildRequires:  %{py3_dist nose}

BuildRequires:  %{py3_dist numpy}

BuildRequires:  %{py3_dist tables}

BuildRequires:  %{py3_dist jsonpickle}

BuildRequires:  %{py3_dist pymongo}

BuildRequires:  %{py3_dist sphinx}

BuildRequires:  %{py3_dist setuptools}

Requires:  %{py3_dist lxml}

Requires:  %{py3_dist numpy}

Requires:  %{py3_dist tables}

Requires:  %{py3_dist jsonpickle}

Requires:  %{py3_dist pymongo}

%{?python_provide:%python_provide python3-%{srcname}}

%description -n python3-%{srcname}

%{_description}

%package doc

Summary:    Documentation for %{srcname}

%description doc

%{_description}

%prep

%autosetup -p 1 -n %{srcname}-%{version}

# remove shebang

sed -i '1d' neuroml/nml/nml.py

# remove egg info

rm -fv %{name}.egg-info

# correct end of line encoding

sed -i 's/\r$//' neuroml/examples/test_files/tmp2.swc

%build

%py3_build

# Make documentation

pushd doc && \

    make html SPHINXBUILD=sphinx-build-3 && \

    rm _build/html/.buildinfo -fv && \

popd || exit -1

%install

%py3_install

%check

nosetests-3

%files -n python3-%{srcname}

%license LICENSE

%doc README.md AUTHORS

%{python3_sitelib}/%{srcname}-*.egg-info/

%{python3_sitelib}/neuroml

%files doc

%license LICENSE

%doc README.md AUTHORS

%doc neuroml/examples doc/_build/html/

%changelog

* Thu Jun 25 2020 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 0.2.50-2

- Explicitly BR setuptools

* Sun Jun 07 2020 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 0.2.50-1

- Update to 0.2.50

* Tue May 26 2020 Miro Hrončok <mhroncok@redhat.com> - 0.2.47-6

- Rebuilt for Python 3.9

* Thu Jan 30 2020 Fedora Release Engineering <releng@fedoraproject.org> - 0.2.47-5

- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild

* Thu Oct 03 2019 Miro Hrončok <mhroncok@redhat.com> - 0.2.47-4

- Rebuilt for Python 3.8.0rc1 (#1748018)

* Mon Aug 19 2019 Miro Hrončok <mhroncok@redhat.com> - 0.2.47-3

- Rebuilt for Python 3.8

* Fri Jul 26 2019 Fedora Release Engineering <releng@fedoraproject.org> - 0.2.47-2

- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild

* Thu Apr 11 2019 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 0.2.47-1

- Update to 0.2.47

- use github tar since pypi tar does not contain all required files

* Sat Feb 02 2019 Fedora Release Engineering <releng@fedoraproject.org> - 0.2.45-6

- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild

* Sat Oct 27 2018 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 0.2.45-5

- Update to use conditional for spec uniformity

* Fri Oct 26 2018 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 0.2.45-4

- Correct license

- Remove bcond

- Remove hidden buildinfo file

- Correct end of line encoding

- Remove unneeded shebang (https://github.com/NeuralEnsemble/libNeuroML/issues/77)

- Add missing requires

* Thu Oct 25 2018 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 0.2.45-3

- Correct doc build

- Temporarily use bcond

* Thu Oct 25 2018 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 0.2.45-2

- Correct doc sub package name

* Thu Oct 25 2018 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 0.2.45-1

- Initial build