# Use a git commit with fixes

%global commit 1fab57162a016351f530a7db2c77c1c1b3355476

%global shortcommit %(c=%{commit}; echo ${c:0:7})

# Multiple tests fail on i386

# https://github.com/nipy/nitime/issues/136

# https://github.com/nipy/nitime/issues/137

%global run_tests 0

# The documentation fails to build on F29, so we'll just point to upstream

# documentation

%if 0%{?fedora} < 30

%global with_doc 0

%else

%global with_doc 1

%endif%

# Requires nibabel which is only available for python3-nibabel

%global with_py2 0

%global srcname nitime

%global desc %{expand: \

Nitime is library of tools and algorithms for the analysis of time-series data

from neuroscience experiments. It contains a implementation of numerical

algorithms for time-series analysis both in the time and spectral domains, a

set of container objects to represent time-series, and auxiliary objects that

expose a high level interface to the numerical machinery and make common

analysis tasks easy to express with compact and semantically clear code.

Current information can always be found at the nitime website. Questions and

comments can be directed to the mailing list:

http://mail.scipy.org/mailman/listinfo/nipy-devel.

Documentation is available at http://nipy.org/nitime/documentation.html

}

Name:           python-%{srcname}

Version:        0.8

Release:        0.2.git%{shortcommit}%{?dist}

Summary:        Timeseries analysis for neuroscience data

License:        BSD

URL:            http://nipy.org/%{srcname}

Source0:        https://github.com/nipy/nitime/archive/%{commit}/%{srcname}-%{shortcommit}.tar.gz

# Remove bundled six

# Fix matplotlib

Patch0:         %{srcname}-fix-builds.patch

BuildRequires:  python3-devel

BuildRequires:  %{py3_dist networkx}

BuildRequires:  %{py3_dist nibabel}

BuildRequires:  %{py3_dist cython}

BuildRequires:  %{py3_dist pytest}

BuildRequires:  %{py3_dist nose}

BuildRequires:  %{py3_dist matplotlib}

BuildRequires:  gcc

%if %{with_doc}

BuildRequires:  %{py3_dist sphinx}

BuildRequires:  texlive-latex

BuildRequires:  texlive-ucs

BuildRequires:  tex(amsthm.sty)

%endif

Requires:       %{py3_dist numpy}

Requires:       %{py3_dist scipy}

Requires:       %{py3_dist matplotlib}

Requires:       %{py3_dist networkx}

Requires:       %{py3_dist nibabel}

Requires:       %{py3_dist cython}

Requires:       %{py3_dist six}

%description

%{desc}

%if %{with_py2}

%package -n python2-%{srcname}

Summary:        %{summary}

BuildRequires:  python2-devel

BuildRequires:  %{py2_dist networkx}

BuildRequires:  %{py2_dist nibabel}

BuildRequires:  %{py2_dist cython}

BuildRequires:  %{py2_dist pytest}

BuildRequires:  %{py2_dist nose}

BuildRequires:  %{py2_dist matplotlib}

Requires:       %{py2_dist numpy}

Requires:       %{py2_dist scipy}

Requires:       %{py2_dist matplotlib}

Requires:       %{py2_dist networkx}

Requires:       %{py2_dist nibabel}

Requires:       %{py2_dist cython}

Requires:       %{py2_dist six}

%{?python_provide:%python_provide python2-%{srcname}}

%description -n python2-%{srcname}

%{desc}

%endif

%package -n python3-%{srcname}

Summary:        %{summary}

%{?python_provide:%python_provide python3-%{srcname}}

%description -n python3-%{srcname}

%{desc}

%if %{with_doc}

%package doc

Summary:    Documentation for %{name}

BuildArch:  noarch

%description doc

Documentation files for %{name}.

%endif

%prep

%autosetup -n %{srcname}-%{commit} -p1

rm -rvf %{srcname}.egg-info

rm -f nitime/six.py

find . -name "*.so" -exec rm -fv '{}' \;

# Correct shebangs to python3

sed -i 's|^#!/usr/bin/env python|#!/usr/bin/python3|' setup.py

sed -i 's|python|python3|' doc/Makefile

pushd tools

    for f in *; do

        sed -E -i 's|^#!/usr/bin/env python|#!/usr/bin/python3|' "$f"

    done

popd

%build

%py3_build

%if %{with_py2}

%py2_build

%endif

%if %{with_doc}

pushd doc &&

    PYTHONPATH=../ make html &&

    rm -fv _build/html/.buildinfo

popd

%endif

%install

%if %{with_py2}

%py2_install

%endif

%py3_install

%check

%if %{run_tests}

# From https://github.com/neurodebian/nitime/blob/3ca5a131ba1ea839e047a7a2e008b754be9fe4bb/debian/rules#L47

%if %{with_py2}

PYTHONPATH=$RPM_BUILD_ROOT/%{python2_sitearch} nosetests-2 '--exclude=test_(coherence_linear_dependence|lazy_reload)' nitime

%endif

PYTHONPATH=$RPM_BUILD_ROOT/%{python3_sitearch} nosetests-3 '--exclude=test_(coherence_linear_dependence|lazy_reload)' nitime

%endif

%if %{with_py2}

%files -n python2-%{srcname}

%license LICENSE

%doc README.txt THANKS

%{python2_sitearch}/%{srcname}-%{version}.dev0-py2.?.egg-info

%{python2_sitearch}/%{srcname}

%endif

%files -n python3-%{srcname}

%license LICENSE

%doc README.txt THANKS

%{python3_sitearch}/%{srcname}-%{version}.dev0-py3.?.egg-info

%{python3_sitearch}/%{srcname}

%if %{with_doc}

%files doc

%license LICENSE

%doc doc/_build/html

%endif

%changelog

* Tue Nov 06 2018 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 0.8-0.2.git1fab571

- Enable documentation on rawhide where build succeeds (F30)

- Remove extra buildinfo file

- Make doc package noarch

- Move THANKS file to correct bits

* Sun Nov 04 2018 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 0.8-0.1.git1fab571

- Initial build