Name:    ugene

Summary: Integrated bioinformatics toolkit

Version: 1.5.0

Release: 3%{?dist}

#The entire source code is GPLv2+ except:

#file src/libs_3rdparty/qtbindings_core/src/qtscriptconcurrent.h which is GPLv2

#files in src/plugins_3rdparty/script_debuger/src/qtscriptdebug/ which are GPLv2

License: GPLv2+ and GPLv2

Group:   Applications/Engineering

URL:     http://ugene.unipro.ru

Source0: http://ugene.unipro.ru/downloads/%{name}-%{version}.tar.gz

Buildroot: %(mktemp -ud %{_tmppath}/%{name}-%{version}-%{release}-XXXXXX)

BuildRequires: qt-devel >= 4.5.0 zlib-devel desktop-file-utils

#We need strict versions of qt for correct work of src/libs_3rdparty/qtbindings_*

Requires:  qt >= 4.5.0 qt-x11 >= 4.5.0

%description

Unipro UGENE is a cross-platform visual environment for DNA and protein

sequence analysis. UGENE integrates the most important bioinformatics

computational algorithms and provides an easy-to-use GUI for performing

complex analysis of the genomic data. One of the main features of UGENE

is a designer for custom bioinformatics workflows.

%prep

%setup -q

%build

# replacing lrelease -> lrelease-qt4 for compatibility with fedora

sed -i -e 's/lrelease/lrelease-qt4/g' ugene.pro

%_bindir/qmake-qt4 -r \

        INSTALL_BINDIR=%{_bindir} \

        INSTALL_LIBDIR=%{_libdir} \

        INSTALL_DATADIR=%{_datadir} \

        INSTALL_MANDIR=%{_mandir}

make %{?_smp_mflags}

%install

rm -rf %{buildroot}

make install INSTALL_ROOT=%{buildroot}

desktop-file-validate %{buildroot}/%{_datadir}/applications/%{name}.desktop

%clean

rm -rf %{buildroot}

%files

%defattr(-,root,root,-)

%{_bindir}/*

%{_libdir}/%{name}/

%{_datadir}/applications/*

%{_datadir}/pixmaps/*

%{_datadir}/%{name}/

%{_mandir}/man1/*

%doc COPYRIGHT LICENSE

%changelog

* Fri Jul 10 2009 Ivan Efremov <iefremov@unipro.ru> - 1.5.0-3

- desktop-file-utils added to dependencies

* Mon Jul 06 2009 Ivan Efremov <iefremov@unipro.ru> - 1.5.0-1

- Upstream version change

- Needed Qt versions bumped up

- Fix for lrelease updated due to upstream package changes

* Tue Mar 24 2009 Ivan Efremov <iefremov@unipro.ru> - 1.4.1-1

- Upstream version change

* Fri Mar 06 2009 Ivan Efremov <iefremov@unipro.ru> - 1.4.0-1

- Upstream version change

* Mon Feb 02 2009 Ivan Efremov <iefremov@unipro.ru> - 1.3.3-1

- Initial release of rpm