Name:           PyMca
Version:        5.6.7
Release:        %autorelease
Summary:        X-ray Fluorescence Toolkit
License:        GPLv2+
URL:            http://pymca.sourceforge.net/
%if 0
Original source: http://downloads.sourceforge.net/sourceforge/pymca/pymca%%{version}-src.tgz
However it bundles a copy of the "sift" module which implements a patented algorithm.
The algorithm can be used for non-commercial research purposes ONLY. Per:
http://fedoraproject.org/wiki/Packaging:SourceURL#When_Upstream_uses_Prohibited_Code
we must remove them before uploading:
  ./getsources.sh %{version}
%endif
Source0:        pymca-%{version}-filtered.tar.xz
Source1:        PyMca.desktop
Source2:        edfviewer.desktop
Source3:        elementsinfo.desktop
Source4:        mca2edf.desktop
Source5:        peakidentifier.desktop
Source6:        pymcabatch.desktop
Source7:        pymcapostbatch.desktop
Source8:        pymcaroitool.desktop
BuildRequires:  gcc
BuildRequires:  desktop-file-utils
BuildRequires:  ImageMagick
BuildRequires:  python3-devel
BuildRequires:  python3-setuptools
BuildRequires:  python3dist(cython)
BuildRequires:  python3dist(numpy)
BuildRequires:  python3dist(h5py)
BuildRequires:  python3dist(pyqt5)
BuildRequires:  python3dist(fisx)
BuildRequires:  python3dist(matplotlib)
BuildRequires:  python3-matplotlib-qt5
BuildRequires:  mesa-libGL-devel
BuildRequires:  mesa-libGLU-devel
BuildRequires:  qhull-devel
BuildRequires:  glibc-langpack-pl
Requires:       hicolor-icon-theme
Requires:       %{name}-data = %{version}-%{release}
# Dependency on the graphical toolkit is not autogenerated because many different
# ones are supported, https://bugzilla.redhat.com/show_bug.cgi?id=2084297.
Requires:       python3dist(pyqt5)
Requires:       python3-matplotlib-qt5

%description
PyMCA provides a graphical interface for multi-channel analyzer spectra
visualization and analysis. PyMca can display spectra from a file or directly
from SPEC during acquisitions.

%package        data
Summary:        Data files for %{name}
BuildArch:      noarch

%description    data
This package contains photon interaction data/elements data for %{name}.

%prep
%autosetup -p1 -n pymca-%{version}

# Drop bundled qhull.
rm -frv third-party/
# Patch for the craps qhull brings in.
sed -i -e 's|"geom.h"|<geom.h>|'      \
       -e 's|"libqhull.h"|<libqhull.h>|' \
       -e 's|"poly.h"|<poly.h>|'      \
       -e 's|"qset.h"|<qset.h>|'      \
       PyMca5/Object3D/Object3DQhull/Object3DQhull.c

# Fix wrong shebang of pymcapostbatch.
sed -i "s|!python|!%{__python3}|g" PyMca5/scripts/pymcapostbatch

# grep -rE $'(^\\s*if.*)is(\\s+not)?(\\s+[\'"0-9])' . | \
#   xargs sed -r -i $'s/(^\\s*if.*)is(\\s+not)?(\\s+[\'"0-9])/\1==\2/'

%build
# Need to define manually. Note using pkg-config to export the cflags
# is not identified by the setup.py script as it requires non-blank
# stdin for both CFLAGS/LDFLAGS, so we manually define the CFLAGS.
QHULL_CFLAGS="-I%{_includedir}/libqhull" \
QHULL_LIBS="-lqhull" \
SPECFILE_USE_GNU_SOURCE=1 \
PYMCA_DATA_DIR=/usr/share/PyMca \
PYMCA_DOC_DIR=/usr/share/doc/PyMca \
%py3_build

%install
PYMCA_DATA_DIR=/usr/share/PyMca \
PYMCA_DOC_DIR=/usr/share/doc/PyMca \
%py3_install

# Install desktop file.
desktop-file-install --dir=%{buildroot}%{_datadir}/applications %{S:1}
desktop-file-install --dir=%{buildroot}%{_datadir}/applications %{S:2}
desktop-file-install --dir=%{buildroot}%{_datadir}/applications %{S:3}
desktop-file-install --dir=%{buildroot}%{_datadir}/applications %{S:4}
desktop-file-install --dir=%{buildroot}%{_datadir}/applications %{S:5}
desktop-file-install --dir=%{buildroot}%{_datadir}/applications %{S:6}
desktop-file-install --dir=%{buildroot}%{_datadir}/applications %{S:7}
desktop-file-install --dir=%{buildroot}%{_datadir}/applications %{S:8}

# Merge applications into one software center item
mkdir -p $RPM_BUILD_ROOT%{_datadir}/appdata
cat > $RPM_BUILD_ROOT%{_datadir}/appdata/edfviewer.appdata.xml <<EOF
<?xml version="1.0" encoding="UTF-8"?>
<!-- Copyright 2014 Richard Hughes <richard@hughsie.com> -->
<component type="desktop">
  <metadata_license>CC0-1.0</metadata_license>
  <id>edfviewer.desktop</id>
  <metadata>
    <value key="X-Merge-With-Parent">PyMca.desktop</value>
  </metadata>
</component>
EOF
cat > $RPM_BUILD_ROOT%{_datadir}/appdata/elementsinfo.appdata.xml <<EOF
<?xml version="1.0" encoding="UTF-8"?>
<!-- Copyright 2014 Richard Hughes <richard@hughsie.com> -->
<component type="desktop">
  <metadata_license>CC0-1.0</metadata_license>
  <id>elementsinfo.desktop</id>
  <metadata>
    <value key="X-Merge-With-Parent">PyMca.desktop</value>
  </metadata>
</component>
EOF
cat > $RPM_BUILD_ROOT%{_datadir}/appdata/mca2edf.appdata.xml <<EOF
<?xml version="1.0" encoding="UTF-8"?>
<!-- Copyright 2014 Richard Hughes <richard@hughsie.com> -->
<component type="desktop">
  <metadata_license>CC0-1.0</metadata_license>
  <id>mca2edf.desktop</id>
  <metadata>
    <value key="X-Merge-With-Parent">PyMca.desktop</value>
  </metadata>
</component>
EOF
cat > $RPM_BUILD_ROOT%{_datadir}/appdata/peakidentifier.appdata.xml <<EOF
<?xml version="1.0" encoding="UTF-8"?>
<!-- Copyright 2014 Richard Hughes <richard@hughsie.com> -->
<component type="desktop">
  <metadata_license>CC0-1.0</metadata_license>
  <id>peakidentifier.desktop</id>
  <metadata>
    <value key="X-Merge-With-Parent">PyMca.desktop</value>
  </metadata>
</component>
EOF
cat > $RPM_BUILD_ROOT%{_datadir}/appdata/pymcabatch.appdata.xml <<EOF
<?xml version="1.0" encoding="UTF-8"?>
<!-- Copyright 2014 Richard Hughes <richard@hughsie.com> -->
<component type="desktop">
  <metadata_license>CC0-1.0</metadata_license>
  <id>pymcabatch.desktop</id>
  <metadata>
    <value key="X-Merge-With-Parent">PyMca.desktop</value>
  </metadata>
</component>
EOF
cat > $RPM_BUILD_ROOT%{_datadir}/appdata/pymcapostbatch.appdata.xml <<EOF
<?xml version="1.0" encoding="UTF-8"?>
<!-- Copyright 2014 Richard Hughes <richard@hughsie.com> -->
<component type="desktop">
  <metadata_license>CC0-1.0</metadata_license>
  <id>pymcapostbatch.desktop</id>
  <metadata>
    <value key="X-Merge-With-Parent">PyMca.desktop</value>
  </metadata>
</component>
EOF
cat > $RPM_BUILD_ROOT%{_datadir}/appdata/pymcaroitool.appdata.xml <<EOF
<?xml version="1.0" encoding="UTF-8"?>
<!-- Copyright 2014 Richard Hughes <richard@hughsie.com> -->
<component type="desktop">
  <metadata_license>CC0-1.0</metadata_license>
  <id>pymcaroitool.desktop</id>
  <metadata>
    <value key="X-Merge-With-Parent">PyMca.desktop</value>
  </metadata>
</component>
EOF

# Convert to various sizes, via the 256x256 source.
for size in 192x192 128x128 96x96 72x72 64x64 48x48 40x40 36x36 32x32 26x26 24x24 22x22 16x16 ; do
    install -pdm755 \
        %{buildroot}%{_datadir}/icons/hicolor/${size}/apps
    convert -resize ${size} icons/PyMca_256x256.png \
        %{buildroot}%{_datadir}/icons/hicolor/${size}/apps/%{name}.png
done

# Get rid of spurious executable rights.
find %{buildroot}%{python3_sitearch}/PyMca5/ -type f -exec chmod 644 {} +
find %{buildroot}%{python3_sitearch}/PyMca5/ -name *.so -exec chmod 755 {} +

# Get rid of /usr/bin/env in libraries.
find %{buildroot}%{python3_sitearch}/PyMca5 -type f -name '*.py' \
     -exec sed -i '/\/usr\/bin\/env/d' {} + \
     -exec touch -r setup.py {} +

%check
PYTHONPATH=%{buildroot}%{python3_sitearch} \
PYMCA_DATA_DIR=%{buildroot}/usr/share/PyMca \
PYMCA_DOC_DIR=%{buildroot}/usr/share/doc/PyMca \
QT_QPA_PLATFORM=offscreen \
LC_ALL=pl_PL.utf8 \
%{__python3} PyMca5/tests/TestAll.py

# Test results are ingored. In F34 rawhide mock:
# ERROR: testHdf5Uri (ConfigDictTest.testConfigDict)
# FAIL: testNxExtStringAttribute (NexusUtilsTest.testNexusUtils)
# FAIL: testNxExtStringDataset (NexusUtilsTest.testNexusUtils)
# FAIL: testNxStringDataset (NexusUtilsTest.testNexusUtils)

%files
%license LICENSE.GPL
%doc changelog.txt README.rst
%{_bindir}/edfviewer
%{_bindir}/elementsinfo
%{_bindir}/mca2edf
%{_bindir}/peakidentifier
%{_bindir}/pymca*
%{_bindir}/rgbcorrelator
%{_datadir}/appdata/*.appdata.xml
%{_datadir}/applications/*.desktop
%{_datadir}/icons/hicolor/*x*/apps/%{name}.png
%{_mandir}/man1/*.1*
%{python3_sitearch}/PyMca5/
%{python3_sitearch}/PyMca5-%{version}-py%{python3_version}.egg-info
%exclude %{_pkgdocdir}

%files data
%{_datadir}/%{name}/
%{_pkgdocdir}/

%changelog
%autochangelog