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Subject: Re: license for code in rtracklayer
From: Jim Kent <kent@soe.ucsc.edu>
In-Reply-To: <4EBDDC5B.2080603@redhat.com>
Date: Sat, 12 Nov 2011 10:32:06 -0800
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Message-Id: <0490A007-6BAF-4B4E-970F-80E88CA9D24E@soe.ucsc.edu>
References: <4EBD6A41.5070209@redhat.com> <AA059DA7-4D44-4A57-B0EC-198A84F179FF@soe.ucsc.edu> <4EBDDC5B.2080603@redhat.com>
To: Tom Callaway <tcallawa@redhat.com>
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X-Scanned-By: MIMEDefang 2.67 on 10.5.11.12
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ps - if you want to stick the original BSD on to simplify your life =
that's ok with me, but we don't actually require
attribution, or the disclaimer.
On Nov 11, 2011, at 6:39 PM, Tom Callaway wrote:
> On 11/11/2011 09:14 PM, Jim Kent wrote:
>> Could you give me the name of the source code modules you are =
concerned about?
>=20
> Within the rtracklayer code, there is a directory under src labeled
> "ucsc". The following files have your copyright statement:
>=20
> bits.c
> bits.h
> cheapcgi.h
> common.c
> common.h
> dlist.c
> dlist.h
> dnaseq.c
> dnaseq.h
> dnautil.c
> dnautil.h
> dystring.c
> dystring.h
> errabort.c
> errabort.h
> hash.c
> hash.h
> hmmstats.c
> hmmstats.h
> htmshell.h
> linefile.c
> linefile.h
> localmem.c
> localmem.h
> memalloc.c
> memalloc.h
> net.c
> net.h
> obscure.c
> obscure.h
> options.h
> osunix.c
> oswin9x.c
> portable.h
> portimpl.h
> sig.h
> sqlNum.c
> sqlNum.h
> wildcmp.c
>=20
> The rtracklayer source can be found here:
> =
http://www.bioconductor.org/packages/release/bioc/html/rtracklayer.html
>=20
> Thanks,
>=20
> ~tom
>=20
> =3D=3D
> Fedora Project