%global singulardir %{_libdir}/Singular
%global upstreamver 4-1-0
%global downstreamver %(tr - . <<< %{upstreamver})
%global patchver p2
%if 0%{?fedora}
%global ntl8 1
%endif
# Use this to build without polymake support if polymake is broken.
%bcond_without polymake
Name: Singular
Version: %{downstreamver}%{?patchver}
Release: 1%{?dist}
Summary: Computer Algebra System for polynomial computations
# License analysis:
# - factory/readcf.cc, Singular/grammar.cc, and Singular/grammar.h are
# nominally GPLv3+, but they are generated by bison, so the bison special
# exception applies
# - Singular/links/ndbm.cc and Singular/links/ndbm.h are BSD, which is subsumed
# by both GPLv2 and GPLv3
# - Everything else is marked either "GPLv2 or GPLv3" or "GPLv2 or later", with
# the former more strict than the latter
License: GPLv2 or GPLv3
Source0: http://www.mathematik.uni-kl.de/ftp/pub/Math/Singular/SOURCES/%{upstreamver}/singular-%{version}.tar.gz
URL: http://www.singular.uni-kl.de/
BuildRequires: bison
BuildRequires: cddlib-devel
BuildRequires: desktop-file-utils
BuildRequires: doxygen
BuildRequires: emacs
BuildRequires: flex
BuildRequires: flint-devel
BuildRequires: gcc-c++
BuildRequires: gmp-devel
BuildRequires: libtool
BuildRequires: libxml2-devel
BuildRequires: mathicgb-devel
BuildRequires: ncurses-devel
BuildRequires: ntl-devel%{?ntl8: >= 8.0}
%if %{with polymake}
BuildRequires: polymake
%endif
BuildRequires: python2-devel
BuildRequires: readline-devel
# Need uudecode for documentation images in tarball
BuildRequires: sharutils
BuildRequires: texinfo-tex
BuildRequires: tex(latex)
BuildRequires: zlib-devel
Requires: %{name}-libs%{?_isa} = %{version}-%{release}
Requires: environment-modules
Requires: less
Requires: surf-geometry
# Support ARM and S390(x) architectures
Patch0: %{name}-arches.patch
# Fix both underlinking and overlinking
Patch1: %{name}-link.patch
# Fix the desktop files
Patch2: %{name}-desktop.patch
# Adapt to new template code in NTL 8
Patch3: %{name}-ntl8.patch
# Fix code that can overflow a character buffer with sprintf
Patch4: %{name}-format.patch
# Add missing parentheses that can change code meaning in a macro
Patch5: %{name}-parens.patch
# Fix a sequence point error
Patch6: %{name}-sequence-point.patch
# Fix code that violates the strict aliasing rules
Patch7: %{name}-alias.patch
# Adapt to polymake 3.1
Patch8: %{name}-polymake.patch
%description
Singular is a computer algebra system for polynomial computations, with
special emphasis on commutative and non-commutative algebra, algebraic
geometry, and singularity theory.
%package libs
Summary: Singular library
Requires: %{name}-libpolys%{?_isa} = %{version}-%{release}
%description libs
This package contains the main Singular library.
%package devel
Summary: Singular development files
Requires: %{name}-libs%{?_isa} = %{version}-%{release}
Requires: %{name}-libpolys-devel%{?_isa} = %{version}-%{release}
%description devel
This package contains the Singular development files.
%package doc
Summary: Singular documentation files
Requires: %{name}%{?_isa} = %{version}-%{release}
%description doc
This package contains the Singular documentation files.
%package emacs
Summary: (X)Emacs interface to Singular
Requires: emacs-common
Requires: %{name}%{?_isa} = %{version}-%{release}
%description emacs
Emacs and XEmacs interface to Singular.
%package -n factory
Summary: C++ class library for multivariate polynomial data
Requires: factory-gftables = %{version}-%{release}
%description -n factory
Factory is a C++ class library that implements a recursive
representation of multivariate polynomial data. It handles sparse
multivariate polynomials over different coefficient domains, such as Z,
Q and GF(q), as well as algebraic extensions over Q and GF(q) in an
efficient way. Factory includes algorithms for computing univariate and
multivariate gcds, resultants, chinese remainders, and algorithms to
factorize multivariate polynomials and to compute the absolute
factorization of multivariate polynomials with integer coefficients.
%package -n factory-devel
Summary: Development files for the Singular factory
Requires: factory%{?_isa} = %{version}-%{release}
Requires: gmp-devel%{?_isa}
# These can be removed once Fedora 25 reached EOL
Obsoletes: %{name}-examples < 4.0.0-1
Provides: %{name}-examples = %{version}-%{release}
%description -n factory-devel
Development files for the Singular factory.
%package -n factory-gftables
Summary: Singular factory addition tables
BuildArch: noarch
%description -n factory-gftables
Factory uses addition tables to calculate in GF(p^n) in an efficient way.
%package libpolys
Summary: C++ class library for polynomials in Singular
Requires: factory%{?_isa} = %{version}-%{release}
%description libpolys
Libpolys contains the data structures and basic algorithms for
polynomials in Singular.
%package libpolys-devel
Summary: Development files for libpolys
Requires: %{name}-libs%{?_isa} = %{version}-%{release}
Requires: factory-devel%{?_isa} = %{version}-%{release}
Requires: flint-devel%{?_isa}
# These can be removed once Fedora 25 reached EOL
Obsoletes: libfac-devel < 4.0.0-1
Provides: libfac-devel = %{version}-%{release}
%description libpolys-devel
Development files for libpolys.
%package polymake
Summary: Singular interface to polymake
Requires: polymake%{_isa}
Requires: TOPCOM%{_isa}
%description polymake
Singular interface to polymake.
%package surfex
Summary: Singular java interface
Requires: java
Requires: %{name}%{?_isa} = %{version}-%{release}
%description surfex
This package contains the Singular java interface.
%prep
%setup -q -n singular-%{downstreamver}
%patch0 -p1 -b .arches
%patch1 -p1 -b .link
%patch2 -p1 -b .desktop
%patch3 -p1 -b .ntl8
%patch4 -p1 -b .format
%patch5 -p1 -b .parens
%patch6 -p1 -b .seqpoint
%patch7 -p1 -b .alias
%patch8 -p1 -b .polymake
# Regenerate configure due to patches 0 and 1
autoreconf -fi
# Fix encoding
iconv -f iso8859-1 -t utf-8 COPYING > COPYING.utf8
touch -r COPYING COPYING.utf8
mv -f COPYING.utf8 COPYING
%build
export CPPFLAGS="-I%{_includedir}/flint"
export CFLAGS="%{optflags} -fPIC -fno-delete-null-pointer-checks"
export CXXFLAGS=$CFLAGS
# Cannot use RPM_LD_FLAGS, as -Wl,-z,now breaks lazy module loading
export LDFLAGS="-Wl,-z,relro"
%configure \
--bindir=%{singulardir} \
--disable-silent-rules \
--disable-optimizationflags \
--disable-static \
--enable-p-procs-dynamic \
--enable-gfanlib \
%if %{with polymake}
--enable-polymake \
%else
--disable-polymake \
%endif
--with-gmp \
--with-ntl \
--with-flint \
--with-mathicgb \
--with-python \
--with-readline \
--disable-doc \
--with-malloc=system
make %{?_smp_mflags}
make %{?_smp_mflags} -C dox html
%install
make DESTDIR=%{buildroot} install
# Validate the desktop files
desktop-file-validate %{buildroot}%{_datadir}/applications/Singular.desktop
desktop-file-validate \
%{buildroot}%{_datadir}/applications/Singular-manual.desktop
# We don't want the libtool files
rm -f %{buildroot}%{_libdir}/*.la
rm -f %{buildroot}%{_libexecdir}/singular/MOD/*.la
# Remove files we don't want in the installed tree
rm -f %{buildroot}%{_datadir}/singular/emacs/{ChangeLog,COPYING,NEWS}
# Move the config scripts
mkdir -p %{buildroot}%{_bindir}
mv %{buildroot}%{singulardir}/*-config %{buildroot}%{_bindir}
# remove script that calls surf; we don't ship it
rm -f %{buildroot}%{singulardir}/singularsurf
# create a script also setting SINGULARPATH
cat > %{buildroot}%{_bindir}/Singular << EOF
#!/bin/sh
. /etc/profile.d/modules.sh
module load surf-geometry-%{_arch}
export SINGULARPATH=%{singulardir}
exec %{singulardir}/Singular-%{upstreamver} "\$@"
EOF
chmod 0755 %{buildroot}%{_bindir}/Singular
# TSingular
cat > %{buildroot}%{_bindir}/TSingular << EOF
#!/bin/sh
. /etc/profile.d/modules.sh
module load surf-geometry-%{_arch}
exec %{singulardir}/TSingular --singular %{_bindir}/Singular "\$@"
EOF
chmod 0755 %{buildroot}%{_bindir}/TSingular
# surfex
cat > %{buildroot}%{_bindir}/surfex << EOF
#!/bin/sh
. /etc/profile.d/modules.sh
module load surf-geometry-%{_arch}
exec %{singulardir}/surfex %{singulardir}/LIB/surfex "\$@"
EOF
chmod 0755 %{buildroot}%{_bindir}/surfex
# ESingular
cat > %{buildroot}%{_bindir}/ESingular << EOF
#!/bin/sh
. /etc/profile.d/modules.sh
module load surf-geometry-%{_arch}
exec %{singulardir}/ESingular --singular %{_bindir}/Singular "\$@"
EOF
chmod 0755 %{buildroot}%{_bindir}/ESingular
%check
export LD_LIBRARY_PATH=%{buildroot}%{_libdir}
make check
%post
/sbin/install-info %{_infodir}/singular.hlp %{_infodir}/dir 2>/dev/null || :
%postun
if [ $1 = 0 ]; then
/sbin/install-info --delete %{_infodir}/singular.hlp %{_infodir}/dir 2>/dev/null || :
fi
%post -n factory -p /sbin/ldconfig
%postun -n factory -p /sbin/ldconfig
%post libpolys -p /sbin/ldconfig
%postun libpolys -p /sbin/ldconfig
%post libs -p /sbin/ldconfig
%postun libs -p /sbin/ldconfig
%files
%doc README.md
%{_bindir}/Singular
%{_bindir}/TSingular
%{_infodir}/singular.hlp*
%{_mandir}/man1/Singular.1*
%{_mandir}/man1/TSingular.1*
%{_datadir}/applications/Singular.desktop
%{_datadir}/icons/Singular.png
%{_datadir}/singular/singular.idx
%docdir %{_datadir}/singular/html/
%{_datadir}/singular/html/
%{singulardir}/Singular
%{singulardir}/TSingular
%files libs
%doc libpolys/README
%license COPYING
%license GPL2
%license GPL3
%{_libdir}/libgfan.so.*
%{_libdir}/libSingular-*.so
%{_libexecdir}/singular/
%exclude %{_libexecdir}/singular/MOD/polymake.so
%dir %{_datadir}/singular/
%{_datadir}/singular/LIB/
%exclude %{_datadir}/singular/LIB/polymake.lib
%exclude %{_datadir}/singular/LIB/surfex.lib
%files devel
%doc kernel/ChangeLog
%{_bindir}/libsingular-config
%{_includedir}/gfanlib/
%{_includedir}/singular/kernel/
%{_includedir}/singular/Singular/
%{_includedir}/singular/singularconfig.h
%{_libdir}/libgfan.so
%{_libdir}/libSingular.so
%{_libdir}/pkgconfig/Singular.pc
%files doc
%doc dox/html/
%doc dox/*.html
%doc dox/*.png
%doc dox/*.css
%doc dox/tags
%{_datadir}/applications/Singular-manual.desktop
%files emacs
%license emacs/COPYING
%doc emacs/ChangeLog
%doc emacs/NEWS
%{_bindir}/ESingular
%{_mandir}/man1/ESingular.1*
%{_datadir}/singular/emacs/
%{singulardir}/ESingular
%files surfex
%{_bindir}/surfex
%{_datadir}/singular/LIB/surfex.lib
%files -n factory
%license factory/COPYING
%doc factory/README
%doc factory/NEWS
%{_libdir}/libfactory-*.so
%{_libdir}/libomalloc-*.so
%{_libdir}/libsingular_resources-*.so
%files -n factory-devel
%doc factory/ChangeLog
%doc factory/examples
%{_includedir}/factory/
%{_includedir}/omalloc/
%{_includedir}/resources/
%{_libdir}/libfactory.so
%{_libdir}/libomalloc.so
%{_libdir}/libsingular_resources.so
%{_libdir}/pkgconfig/factory.pc
%{_libdir}/pkgconfig/omalloc.pc
%{_libdir}/pkgconfig/singular_resources.pc
%files -n factory-gftables
%{_datadir}/factory/
%files libpolys
%license libpolys/COPYING
%doc libpolys/README
%{_libdir}/libpolys-*.so
%files libpolys-devel
%{_bindir}/libpolys-config
%dir %{_includedir}/singular/
%{_includedir}/singular/coeffs/
%{_includedir}/singular/libpolysconfig.h
%{_includedir}/singular/misc/
%{_includedir}/singular/polys/
%{_includedir}/singular/reporter/
%{_libdir}/libpolys.so
%{_libdir}/pkgconfig/libpolys.pc
%files polymake
%{_libexecdir}/singular/MOD/polymake.so
%{_datadir}/singular/LIB/polymake.lib
%changelog
* Wed Apr 5 2017 Jerry James <loganjerry@gmail.com> - 4.1.0p2-1
- New upstream version (bz 1181772, 1321077)
- Drop upstreamed patches: -destdir, -headers, -doc, -builddid, -undefined,
and -semaphore
- Add patches: -desktop, -format, -parens, -sequence-point, -alias, -polymake
- libpolys subpackage replaces libfac
- Rework the Emacs support
* Fri Feb 10 2017 Fedora Release Engineering <releng@fedoraproject.org> - 3.1.7-12
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
* Thu Jan 12 2017 Igor Gnatenko <ignatenko@redhat.com> - 3.1.7-11
- Rebuild for readline 7.x
* Wed Nov 9 2016 Paul Howarth <paul@city-fan.org> - 3.1.7-10
- Bootstrap build for ppc64
* Thu Oct 20 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-9
- Rebuild for ntl 10.1.0
* Mon Sep 5 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-8
- Rebuild for ntl 9.11.0
* Tue Jul 26 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-7
- Rebuild with polymake support
* Mon Jul 25 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-6
- Rebuild for ntl 9.10.0
* Thu Jun 2 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-5
- Rebuild for ntl 9.9.1
* Fri Apr 29 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-4
- Rebuild for ntl 9.8.0
* Tue Apr 12 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-3
- Rebuild for polymake 3.0r1
* Sat Mar 19 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-2
- Rebuild for ntl 9.7.0
* Sat Feb 20 2016 Jerry James <loganjerry@gmail.com> - 3.1.7-1
- Update to 3.1.7; fixes FTBFS (bz 1307301)
- Drop upstreamed -flint24 and -gcc5 patches
- Add -boolean patch to fix a malformed boolean expression
* Wed Feb 03 2016 Fedora Release Engineering <releng@fedoraproject.org> - 3.1.6-21
- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild
* Fri Dec 4 2015 Jerry James <loganjerry@gmail.com> - 3.1.6-20
- Rebuild for ntl 9.6.2
- Drop obsolete ntl6 patch
* Fri Oct 16 2015 Jerry James <loganjerry@gmail.com> - 3.1.6-19
- Rebuild for ntl 9.4.0
* Sat Oct 3 2015 Jerry James <loganjerry@gmail.com> - 3.1.6-18
- Rebuild with polymake support
* Sat Sep 19 2015 Jerry James <loganjerry@gmail.com> - 3.1.6-17
- Rebuild for flint 2.5.2 and ntl 9.3.0
* Sun Jul 19 2015 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.6-16
- Disable polymake due to broken dependency cycle
- Correct previous perl warning that is now an error
- Use interactive bash on wrappers to work with other login shells (#1243580)
* Tue Jun 16 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 3.1.6-15
- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild
* Mon May 18 2015 Jerry James <loganjerry@gmail.com> - 3.1.6-14
- Rebuild for ntl 9.1.1 and cddlib-094h
* Sat May 9 2015 Jerry James <loganjerry@gmail.com> - 3.1.6-13
- Rebuild for ntl 9.1.0
* Sun Apr 26 2015 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.6-12
- Update arches patch to support aarch64 (#1213484)
* Thu Apr 2 2015 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.6-11
- Rebuild for rawhide gcc5 and c++ string and list abi
* Mon Feb 2 2015 Jerry James <loganjerry@gmail.com> - 3.1.6-10
- Rebuild for ntl 8.1.2
* Thu Jan 15 2015 Jerry James <loganjerry@gmail.com> - 3.1.6-9
- Rebuild for ntl 8.1.0
- Add Singular-ntl8.patch to adapt
* Tue Oct 28 2014 Jerry James <loganjerry@gmail.com> - 3.1.6-8
- Rebuild for ntl 6.2.1
* Thu Sep 11 2014 Jerry James <loganjerry@gmail.com> - 3.1.6-7
- Rebuild for polymake -2.13-8.git20140811
* Fri Aug 15 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 3.1.6-6
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild
* Tue Jun 17 2014 Jerry James <loganjerry@gmail.com> - 3.1.6-5
- Update Singular-ntl6.patch to instantiate more missing functions
* Fri Jun 06 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 3.1.6-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild
* Thu May 29 2014 Jerry James <loganjerry@gmail.com> - 3.1.6-3
- Rebuild with polymake support
- Fix libsingular.h permissions
* Sun May 18 2014 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.6-2
- Merge with RFE 3.1.6 update (#1074590)
- Remove patches applied upstream
- Disable polymake to allow interface rebootstrap
* Tue Apr 29 2014 Jerry James <loganjerry@gmail.com> - 3.1.5-14
- Rebuild for polymake-2.13
* Wed Apr 2 2014 Jerry James <loganjerry@gmail.com> - 3.1.5-13
- Rebuild for polymake-2.12-15.svn20140326
* Wed Apr 2 2014 Jerry James <loganjerry@gmail.com> - 3.1.5-12
- Rebuild for NTL 6.1.0
- Fix default paths
- Add ability to rebuild without polymake
* Mon Mar 10 2014 Rex Dieter <rdieter@fedoraproject.org> - 3.1.6-1
- 3.1.6
* Mon Mar 10 2014 Rex Dieter <rdieter@fedoraproject.org> - 3.1.5-11
- fix/workaround char=unsigned char assumptions
- (more) consistently use RPM_OPT_FLAGS
- --with-flint --with-polymake
* Tue Jan 14 2014 Jerry James <loganjerry@gmail.com> - 3.1.5-10
- Update normaliz interface for normaliz 2.8 and later
* Mon Nov 25 2013 Rex Dieter <rdieter@fedoraproject.org> - 3.1.5-9
- ExclusiveArch: %%ix86 x86_64
* Fri Aug 16 2013 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.5-8
- Correct underlink problem (#991920#c1)
* Thu Aug 01 2013 Rex Dieter <rdieter@fedoraproject.org> - 3.1.5-7
- rebuild
* Tue May 21 2013 Rex Dieter <rdieter@fedoraproject.org> - 3.1.5-6
- factory-gftables.noarch subpkg (#965655)
* Mon May 6 2013 Jerry James <loganjerry@gmail.com> - 3.1.5-5
- Rebuild for ntl 6.0.0
- Fix semaphore code
- Fix underlinked library
* Wed Feb 13 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 3.1.5-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild
* Sun Nov 11 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.5-3
- Rebuild to have factory include path patch in rawhide package
* Tue Aug 7 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.5-2
- Do not build conflicts with factory-devel neither libfac-devel (#842407)
* Sat Aug 4 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.5-1
- Update to Singular 3.1.5, based on sagemath trac ticket #13237
- Remove already applied patches from sagemath Singular spkg
- Rediff Fedora rpm build patches
- Rediff factory and libfac patches for Macaulay2
* Thu Jul 19 2012 Rex Dieter <rdieter@fedoraproject.org> - 3.1.3-8
- macaulay2 patches for libfac/factory
- omit duplicate %%description sections
* Wed Jul 18 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 3.1.3-7
- Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild
* Sun Jul 8 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.3-6
- Update license field to match valid values.
- Provide newer libfac-devel matching Singular version (#819264).
- Provide newer factory-devel matching Singular version (#819264).
- Remove platform specific factoryconf.h file as only platform specific
contents it has is "#define INT64 long long int" what is not really correct,
neither completely wrong...
* Sun Jul 1 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.3-5
- Do not conflict Singular-devel with libfac-devel.
* Sun Jul 1 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.3-4
- Update license information to match COPYING information.
* Wed May 9 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.3-3
- Correct unresolved mmInit symbol in libsingular.so.
* Sun May 6 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.3-2
- Install singular factory headers in singular devel directory.
- Tag singular-doc files as documentation.
* Sat May 5 2012 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 3.1.3-1
- Initial Singular spec.