Name:           elph

Version:        1.0.1

Release:        30%{?dist}

Summary:        Tool to find motifs in a set of DNA or protein sequences

License:        Artistic clarified

URL:            http://www.cbcb.umd.edu/software/ELPH/

Source0:        ftp://ftp.cbcb.umd.edu/pub/software/elph/ELPH-1.0.1.tar.gz

Patch0:         %{name}-chris.patch

BuildRequires:  gcc-c++

BuildRequires: make

%description

ELPH is a general-purpose Gibbs sampler for finding motifs in a set of

DNA or protein sequences. The program takes as input a set containing

anywhere from a few dozen to thousands of sequences, and searches

through them for the most common motif, assuming that each sequence

contains one copy of the motif.

%prep

%setup -q -n ELPH

%patch0 -p 1 -b .chris

%build

make -C sources %{?_smp_mflags} \

  CFLAGS="$RPM_OPT_FLAGS -fno-exceptions -fno-rtti -D_REENTRANT"

%check

%install

rm -rf $RPM_BUILD_ROOT

mkdir -p $RPM_BUILD_ROOT%{_bindir}

install -m 755 sources/elph $RPM_BUILD_ROOT/%{_bindir}

%files

%doc COPYRIGHT LICENSE README Readme.ELPH VERSION

%{_bindir}/elph

%changelog

* Thu Jan 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-30

- Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild

* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-29

- Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild

* Thu Jan 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-28

- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild

* Wed Jul 21 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-27

- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild

* Tue Jan 26 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-26

- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild

* Mon Jul 27 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-25

- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild

* Tue Jan 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-24

- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild

* Wed Jul 24 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-23

- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild

* Thu Jan 31 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-22

- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild

* Mon Jul 23 2018 Christian Iseli <Christian.Iseli@unil.ch> - 1.0.1-21

- Fix FTBFS due to missing BuildRequires gcc-c++ (bz 1603873)

* Thu Jul 12 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-21

- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild

* Wed Feb 07 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-20

- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild

* Wed Aug 02 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-19

- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild

* Wed Jul 26 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-18

- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild

* Fri Feb 10 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-17

- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild

* Wed Feb 03 2016 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-16

- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild

* Wed Jun 17 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-15

- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild

* Sat May 02 2015 Kalev Lember <kalevlember@gmail.com> - 1.0.1-14

- Rebuilt for GCC 5 C++11 ABI change

* Sat Aug 16 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-13

- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild

* Sat Jun 07 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-12

- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild

* Sat Aug 03 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-11

- Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild

* Wed Feb 13 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-10

- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild

* Wed Jul 18 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-9

- Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild

* Fri Jan 13 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-8

- Rebuilt for https://fedoraproject.org/wiki/Fedora_17_Mass_Rebuild

* Tue Feb 08 2011 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-7

- Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild

* Fri Jul 24 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-6

- Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild

* Tue Feb 24 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.0.1-5

- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild

* Mon Feb 23 2009 Christian Iseli <Christian.Iseli@licr.org> - 1.0.1-4

- Rebuild for F-11

* Mon Feb 18 2008 Fedora Release Engineering <rel-eng@fedoraproject.org> - 1.0.1-3

- Autorebuild for GCC 4.3

* Wed Aug 22 2007 Christian Iseli <Christian.Iseli@licr.org> 1.0.1-2

 - Fix License tag.

* Thu Feb 22 2007 Christian Iseli <Christian.Iseli@licr.org> 1.0.1-1

 - Import in Fedora devel.

* Fri Feb  9 2007 Christian Iseli <Christian.Iseli@licr.org> 1.0.1-0

 - Create spec file.