%{?python_enable_dependency_generator}
%global pkgname Theano
%global srcname theano
%global commit 819122e66bcd089b2a3f472542800feead0bf755
Name: python-%{srcname}
Version: 1.0.13
Release: 4%{?dist}
Summary: Mathematical expressions involving multidimensional arrays
License: BSD
URL: https://docs.pymc.io/PyMC3_and_Theano.html
Source0: https://github.com/pymc-devs/%{pkgname}-PyMC/archive/rel-%{version}.tar.gz
# Workarounds for ppc64le test failures.
# FIXME: diagnose each of these and find code fixes
# - The final assertion in test_nlinalg fails.
# - An unexpected GradientError is thrown at theano/gradient.py line 1790.
Source1: %{name}-ppc64le.patch
# Fix the blas interface; see https://github.com/Theano/Theano/issues/6518
# If we fix the Fedora numpy package to specify flexiblas in its __config__.py
# file, we can discard this patch.
Patch0: %{name}-blas.patch
# Do not try to invoke git to find the commit
Patch1: %{name}-git.patch
# Fix documentation bugs resulting in sphinx warnings
Patch2: %{name}-doc.patch
# Close files when they are no longer needed
Patch3: %{name}-file-leak.patch
# Fix a call to a deprecated function in the printing code
Patch4: %{name}-printing.patch
# Fix parsing of the numpy version
Patch5: %{name}-numpy-version.patch
# Workaround for linecache changes in python 3.10
Patch6: %{name}-linecache.patch
BuildArch: noarch
BuildRequires: gcc-c++
BuildRequires: gcc-gfortran
BuildRequires: git-core
BuildRequires: pkgconfig(flexiblas)
BuildRequires: tex(latex)
BuildRequires: tex(anyfontsize.sty)
BuildRequires: tex-dvipng
BuildRequires: python3-devel
BuildRequires: python3-pygpu-devel
BuildRequires: %{py3_dist cython}
BuildRequires: %{py3_dist numpy}
BuildRequires: %{py3_dist parameterized}
BuildRequires: %{py3_dist pydot}
BuildRequires: %{py3_dist pygments}
BuildRequires: %{py3_dist pytest}
BuildRequires: %{py3_dist scipy}
BuildRequires: %{py3_dist setuptools}
BuildRequires: %{py3_dist six}
BuildRequires: %{py3_dist sphinx}
BuildRequires: %{py3_dist sphinx-rtd-theme}
%global _desc %{expand:
Theano is a Python library that allows you to define, optimize, and
evaluate mathematical expressions involving multi-dimensional arrays
efficiently. Theano features:
- tight integration with NumPy: Use numpy.ndarray in Theano-compiled
functions.
- transparent use of a GPU: Perform data-intensive calculations up to
140x faster than with CPU (float32 only).
- efficient symbolic differentiation: Theano does your derivatives for
function with one or many inputs.
- speed and stability optimizations: Get the right answer for log(1+x)
even when x is really tiny.
- dynamic C code generation: Evaluate expressions faster.
- extensive unit-testing and self-verification: Detect and diagnose many
types of mistake.}
%description %_desc
%package -n python3-%{srcname}
Summary: %{summary}
Requires: flexiblas-devel
Requires: gcc-c++
Requires: gcc-gfortran
Recommends: python%{python3_version}dist(pygpu)
Suggests: python%{python3_version}dist(pydot)
%description -n python3-%{srcname} %_desc
%package doc
Summary: Theano documentation
Requires: font(fontawesome)
Requires: font(lato)
Requires: font(robotoslab)
%description doc
User documentation for Theano.
%prep
%autosetup -n %{pkgname}-PyMC-rel-%{version} -p0
# We don't need to use /usr/bin/env
for fil in $(grep -FRl /bin/env .); do
sed -ri.orig 's,( )?(/usr)?/bin/env[[:blank:]]*python.*,%{_bindir}/python3,' $fil
touch -r $fil.orig $fil
rm $fil.orig
done
# We don't have a git checkout, so don't invoke git to find the commit
sed -i 's/@@tag@@/%{commit}/' doc/conf.py
%build
# Regenerate the Cython files
cython -3 -o theano/scan/c_code/scan_perform.c \
theano/scan/scan_perform.pyx
%py3_build
# Build the documentation
export PYTHONPATH=$PWD
%{python3} doc/scripts/docgen.py --nopdf
rst2html --no-datestamp README.rst README.html
# Remove build artifacts
rm -fr html/.buildinfo html/.doctrees
%install
%py3_install
# Restore executable permission on the scripts
chmod a+x $(find %{buildroot} -name \*.py -o -name \*.sh | xargs grep -l '^#!')
# Do not ship the tests
rm -fr %{buildroot}%{python3_sitelib}/tests
%check
# Workaround for ppc64le test failures; see comment above Source1.
if [ "$(uname -m)" = "ppc64le" ]; then
patch -p0 < %{SOURCE1}
fi
pytest
%files -n python3-%{srcname}
%doc DESCRIPTION.txt HISTORY.txt NEWS.txt README.html
%license doc/LICENSE.txt
%{_bindir}/theano-*
%{python3_sitelib}/Theano*.egg-info/
%{python3_sitelib}/theano/
%{python3_sitelib}/bin/
%files doc
%doc html
%changelog
* Tue Jun 8 2021 Jerry James <loganjerry@gmail.com> - 1.0.13-4
- Add -linecache patch to fix python 3.10 FTBFS (bz 1959774)
* Fri Jun 04 2021 Python Maint <python-maint@redhat.com> - 1.0.13-4
- Rebuilt for Python 3.10
* Wed Jan 27 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.13-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
* Mon Jan 11 2021 Jerry James <loganjerry@gmail.com> - 1.0.13-2
- Add -numpy-version patch to fix FTBFS (bz 1914890)
* Thu Dec 24 2020 Jerry James <loganjerry@gmail.com> - 1.0.13-1
- Version 1.0.13
* Mon Nov 23 2020 Jerry James <loganjerry@gmail.com> - 1.0.11-1
- Version 1.0.11
- Switch to the PyMC fork, now the official version
- Drop the -future-warning patch; it yields incorrect answers
- Test with pytest instead of nose
* Fri Aug 7 2020 Jerry James <loganjerry@gmail.com> - 1.0.5-1
- Version 1.0.5
- Drop upstreamed patches: -ceil-floor-trunc, -clip, -format, -gammaq,
-has-sorted-indices, -is, -iterable, -ordered-dict, -random, -sort, -sphinx3,
-traceback
- Add patches: -file-leak, -printing
- Build with flexiblas instead of with openblas directly
* Wed Jul 29 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.4-6.2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
* Tue May 26 2020 Miro Hrončok <mhroncok@redhat.com> - 1.0.4-6.1
- Rebuilt for Python 3.9
* Tue Feb 4 2020 Jerry James <loganjerry@gmail.com> - 1.0.4-6
- Add -ordered-dict patch, thanks to Miro Hrončok (bz 1797982)
* Thu Jan 30 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.4-5.1
- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
* Mon Nov 25 2019 Jerry James <loganjerry@gmail.com> - 1.0.4-5
- Drop epydoc BR since it has been retired
- Unbundle fonts from the documentation
- Ship an HTML form of the README
- Add -has-sorted-indices patch
* Thu Oct 03 2019 Miro Hrončok <mhroncok@redhat.com> - 1.0.4-4.1
- Rebuilt for Python 3.8.0rc1 (#1748018)
* Thu Aug 29 2019 Jerry James <loganjerry@gmail.com> - 1.0.4-4
- Add -iterable, -git, -format, -is, and -doc patches to fix warnings
* Fri Aug 23 2019 Robert-André Mauchin <zebob.m@gmail.com> - 1.0.4-3
- Fix FTBFS with python-theano-sort patch (#1737011)
* Mon Aug 19 2019 Miro Hrončok <mhroncok@redhat.com> - 1.0.4-2.1
- Rebuilt for Python 3.8
* Fri Aug 16 2019 Jerry James <loganjerry@gmail.com> - 1.0.4-2
- Add -future-warning, -gammaq, -ceil-floor-trunc, -traceback, -clip, and
-random patches to fix FTBFS (bz 1737011)
* Fri Jul 26 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.4-1.2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
* Sat Feb 02 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.4-1.1
- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
* Sat Jan 19 2019 Jerry James <loganjerry@gmail.com> - 1.0.4-1
- New upstream release
* Thu Dec 27 2018 Igor Gnatenko <ignatenkobrain@fedoraproject.org> - 1.0.3-2
- Drop duplicated dependencies
* Sat Oct 6 2018 Jerry James <loganjerry@gmail.com> - 1.0.3-1
- New upstream release
- Partially revert the previous commit; the gcc Requires is needed
- Build with openblas instead of atlas
- Send cython output to the correct directory
- Build with pygpu support
* Sun Aug 12 2018 Igor Gnatenko <ignatenkobrain@fedoraproject.org> - 1.0.2-2
- Drop python2 subpackage
* Sat Jul 14 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.2-1.2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Tue Jun 19 2018 Miro Hrončok <mhroncok@redhat.com> - 1.0.2-1.1
- Rebuilt for Python 3.7
* Wed May 23 2018 Jerry James <loganjerry@gmail.com> - 1.0.2-1
- New upstream release
* Fri Feb 09 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-1.1
- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
* Fri Dec 22 2017 Jerry James <loganjerry@gmail.com> - 1.0.1-1
- New upstream release
- Add -blas patch to fix compilation errors when using the blas interface
- Reenable the tests
- Pass nose flags to prevent memory exhaustion while running the tests
* Fri Nov 17 2017 Igor Gnatenko <ignatenkobrain@fedoraproject.org> - 1.0.0-1
- Update to 1.0.0
* Thu Jul 27 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.9.0-1.1
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
* Wed Mar 22 2017 Jerry James <loganjerry@gmail.com> - 0.9.0-1
- New upstream release
* Sat Feb 11 2017 Fedora Release Engineering <releng@fedoraproject.org> - 0.8.2-1.3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
* Mon Dec 19 2016 Miro Hrončok <mhroncok@redhat.com> - 0.8.2-1.2
- Rebuild for Python 3.6
* Tue Jul 19 2016 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.8.2-1.1
- https://fedoraproject.org/wiki/Changes/Automatic_Provides_for_Python_RPM_Packages
* Thu Apr 21 2016 Jerry James <loganjerry@gmail.com> - 0.8.2-1
- New upstream release
* Fri Apr 15 2016 Jerry James <loganjerry@gmail.com> - 0.8.1-2
- Remove python2 dependency from the python3 subpackage (bz 1324232)
- Recommend pydot instead of requiring it
* Sat Apr 2 2016 Jerry James <loganjerry@gmail.com> - 0.8.1-1
- New upstream release
- Fix the pydot dependencies
* Wed Mar 23 2016 Jerry James <loganjerry@gmail.com> - 0.8.0-1
- New upstream release
* Thu Feb 04 2016 Fedora Release Engineering <releng@fedoraproject.org> - 0.7.1-0.2.a1
- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild
* Mon Feb 1 2016 Jerry James <loganjerry@gmail.com> - 0.7.1-0.1.a1
- Comply with latest python packaging guidelines
* Thu Nov 12 2015 Igor Gnatenko <i.gnatenko.brain@gmail.com> - 0.7.1-0.1.a1
- Update to 0.7.1a1
* Tue Nov 10 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.7.0-2.2
- Rebuilt for https://fedoraproject.org/wiki/Changes/python3.5
* Wed Nov 4 2015 Toshio Kuratomi <toshio@fedoraproject.org> - 0.7.0-2.1
- Fix python3 package requiring python2.
* Thu Jun 18 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.7.0-1.1
- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild
* Wed Apr 1 2015 Jerry James <loganjerry@gmail.com> - 0.7.0-1
- New upstream release
- Drop upstreamed -arm patch
- Regenerate cython files to fix build failure
* Sat Feb 21 2015 Jerry James <loganjerry@gmail.com> - 0.6.0-5
- Add -arm patch to fix build failure on arm builders due to inverted test
* Sat Feb 21 2015 Jerry James <loganjerry@gmail.com> - 0.6.0-4
- Drop workaround for fixed bug (bz 1075826)
- Use license macro
* Sat Jun 07 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.6.0-3.1
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild
* Wed May 14 2014 Jerry James <loganjerry@gmail.com> - 0.6.0-3
- Rebuild for https://fedoraproject.org/wiki/Changes/Python_3.4
* Thu Mar 13 2014 Jerry James <loganjerry@gmail.com> - 0.6.0-2
- Add python3 subpackage
- Add another icon to the -missing tarball
- Update source icons
- Unbundle python-six
- Add workaround for bz 1075826
* Sat Dec 7 2013 Jerry James <loganjerry@gmail.com> - 0.6.0-1
- New upstream release
- Drop upstreamed -import patch
* Mon Oct 21 2013 Jerry James <loganjerry@gmail.com> - 0.6.0-0.1.rc3
- Add the -import patch to fix an exception
- Add more files to the base package docs
* Tue Aug 27 2013 Jerry James <loganjerry@gmail.com> - 0.6.0-0.rc3
- Initial RPM