diff -up src/sage/interfaces/latte.py.orig src/sage/interfaces/latte.py
--- src/sage/interfaces/latte.py.orig	2019-10-03 16:52:46.496156266 -0300
+++ src/sage/interfaces/latte.py	2019-10-03 16:53:00.776241550 -0300
@@ -117,7 +117,7 @@ def count(arg, ehrhart_polynomial=False,
 
     arg = str_to_bytes(arg)
 
-    args = ['count']
+    args = ['latte-count']
     if ehrhart_polynomial and multivariate_generating_function:
         raise ValueError
     if ehrhart_polynomial:
@@ -317,7 +317,7 @@ def integrate(arg, polynomial=None, algo
 
     from sage.rings.rational import Rational
 
-    args = ['integrate']
+    args = ['latte-integrate']
 
     got_polynomial = True if polynomial is not None else False