# Conditional for release and snapshot builds. Uncomment for release-builds.
#global rel_build 1
# Settings used for build from snapshots.
%{!?rel_build:%global commit 038280845fd7fb886f4459996f1405f8ca8c1612}
%{!?rel_build:%global commit_date 20160125}
%{!?rel_build:%global shortcommit %(c=%{commit};echo ${c:0:7})}
%{!?rel_build:%global gitver git%{commit_date}-%{shortcommit}}
%{!?rel_build:%global gitrel .git%{commit_date}.%{shortcommit}}
%{!?rel_build:%global gittar %{name}-%{version}-%{gitver}.tar.gz}
# This is needed, because src-url contains branched part of versioning-scheme.
%global branch 4.0
### Build configuration.
#
# Interfaces
%bcond_without cli
%bcond_without java
%bcond_without lua
%ifarch %{mono_arches}
%bcond_without mono
%else # arch %%{mono_arches}
%bcond_with mono
%endif # arch %%{mono_arches}
# Octave-bindings are failing on %%{arm} with "virtual memory exhausted:
# Operation not permitted", even when building single-threaded. Retiring
# for now, until Koji-builders are on arm64-hardware. See rhbz# 1215737:
# https://bugzilla.redhat.com/show_bug.cgi?id=1215737
%ifnarch %{arm}
%bcond_without octave
%else # narch %%{arm}
%bcond_with octave
%endif # narch %%{arm}
# Perl is not fully implemented by upstream, yet. Disabling.
%bcond_with perl
%bcond_without python
#
# There's no Python3 on older distributions.
%if 0%{?fedora} >= 13 || 0%{?rhel} >= 8
%bcond_without python3
%else # 0%%{?fedora} >= 13 || 0%%{?rhel} >= 8
%bcond_with python3
%endif # 0%%{?fedora} >= 13 || 0%%{?rhel} >= 8
#
%bcond_without r
%bcond_without ruby
#
# Configuration related to swig.
%bcond_without reduce_swig_debug
%bcond_without swig_single_threaded
#
# Testsuite is fully enabled. Memtest is much too slow on %%arm.
%ifnarch %{arm}
%bcond_without memtest
%else # narch %{arm}
%bcond_with memtest
%endif # narch %{arm}
%bcond_without testsuite
#
# The doc-subpkg is noarch on Fedora and RHEL 6+.
#if 0%%{?fedora} >= 9 || 0%%{?rhel} >= 6
#bcond_without noarch_doc
#else # 0%%{?fedora} >= 9 || 0%%{?rhel} >= 6
#bcond_with noarch_doc
#endif # 0%%{?fedora} >= 9 || 0%%{?rhel} >= 6
#
# For some reason docsubpkg differs on %%{arm}.
%bcond_with noarch_doc
#
# Are licenses packaged using %%license?
%if 0%{?fedora} >= 21 || 0%{?rhel} >= 8
%bcond_without license_dir
%else # 0%%{?fedora} >= 21 || 0%%{?rhel} >= 8
%bcond_with license_dir
%endif # 0%%{?fedora} >= 21 || 0%%{?rhel} >= 8
#
# These are disabled by default.
#
# OpenCV-integration is crappy.
%bcond_with opencv
#
# We cannot ship with build-in SVMlight, because of it's crappy license.
%bcond_with svmlight
# This url is common for patches and snapshot builds.
%global giturl https://github.com/%{name}-toolbox/%{name}/
# Filter all provides from bindings and private libs.
%global __provides_exclude_from ^(%{_libdir}/.*/.*%{name}\\.so|%{_libdir}/libmod%{name}.so)
# Do not check any files in docdir for Requires.
%global __requires_exclude_from ^%{_docdir}/.*$
# Turn off the brp-python-bytecompile script. We don't want stuff in %%{_pkgdocdir} to be byte-compiled.
%global __os_install_post %(echo '%{__os_install_post}' | %{__sed} -e 's!/usr/lib[^[:space:]]*/brp-python-bytecompile[[:space:]].*$!!g')
# Setup _pkgdocdir if not defined already.
%{!?_pkgdocdir:%global _pkgdocdir %{_docdir}/%{name}-%{version}}
# CMake-builds go out-of-tree. Tests are not run in %%{buildroot}.
%global _cmake_build_subdir build-%{?__isa}%{?dist}
%global _cmake_testinstall_dir install-%{?__isa}%{?dist}
# Compiling the swig-generated bindings needs too much memory to build the
# the linker-objects in virtual memory for piping through different gcc
# instances, thus we use temporary files instead of pipes to pass the result.
%global optflags %(echo '%{optflags}' | %{__sed} -e 's![ \t]*-pipe[ \t]*! !g')
# The description commonly used by all (sub-)packages.
%global common_description \
The Shogun Machine learning toolbox provides a wide range of unified and \
efficient Machine Learning (ML) methods. The toolbox seamlessly allows to \
easily combine multiple data representations, algorithm classes, and general \
purpose tools. This enables both rapid prototyping of data pipelines and \
extensibility in terms of new algorithms. We combine modern software \
architecture in C++ with both efficient low-level computing backends and \
cutting edge algorithm implementations to solve large-scale Machine Learning \
problems (yet) on single machines. \
\
One of Shogun's most exciting features is that you can use the toolbox through \
a unified interface from C++, Python(3), Octave, R, Java, Lua, etc. This not \
just means that we are independent of trends in computing languages, but it \
also lets you use Shogun as a vehicle to expose your algorithm to multiple \
communities. We use SWIG to enable bidirectional communication between C++ \
and target languages. Shogun runs under Linux/Unix, MacOS, Windows. \
\
Originally focussing on large-scale kernel methods and bioinformatics (for a \
list of scientific papers mentioning Shogun, see here), the toolbox saw \
massive extensions to other fields in recent years. It now offers features \
that span the whole space of Machine Learning methods, including many \
classical methods in classification, regression, dimensionality reduction, \
clustering, but also more advanced algorithm classes such as metric, \
multi-task, structured output, and online learning, as well as feature \
hashing, ensemble methods, and optimization, just to name a few. Shogun in \
addition contains a number of exclusive state-of-the art algorithms such as \
a wealth of efficient SVM implementations, Multiple Kernel Learning, kernel \
hypothesis testing, Krylov methods, etc. All algorithms are supported by a \
collection of general purpose methods for evaluation, parameter tuning, \
preprocessing, serialisation & I/O, etc; the resulting combinatorial \
possibilities are huge. \
\
The wealth of ML open-source software allows us to offer bindings to other \
sophisticated libraries including: LibSVM, LibLinear, LibOCAS, libqp, \
VowpalWabbit, Tapkee, SLEP, GPML and more. \
\
Shogun got initiated in 1999 by Soeren Sonnenburg and Gunnar Raetsch (that's \
where the name ShoGun originates from). It is now developed by a larger team \
of authors, and would not have been possible without the patches and bug \
reports by various people. See contributions for a detailed list. Statistics \
on Shogun's development activity can be found on ohloh.
###############################################################################
Name: shogun
Version: %{branch}.1
Release: 0.9%{?gitrel}%{?dist}
Summary: Large Scale Machine Learning Toolbox
# ===== License-breakdown =====
#
# GPLv3+
# ------
# * except the files explicitly named below
#
# BSD (2 clause)
# --------------
# src/shogun/classifier/GaussianProcessClassification.h src/shogun/classifier/GaussianProcessClassification.cpp
# src/shogun/distributions/EMMixtureModel.cpp src/shogun/distributions/KernelDensity.cpp
# src/shogun/distributions/MixtureModel.cpp src/shogun/distributions/classical/GaussianDistribution.h
# src/shogun/distributions/DiscreteDistribution.h src/shogun/distributions/EMBase.h
# src/shogun/distributions/EMMixtureModel.h src/shogun/distributions/KernelDensity.h
# src/shogun/distributions/MixModelData.h src/shogun/distributions/MixtureModel.h
# src/shogun/features/IndexFeatures.h src/shogun/features/SubsetStack.cpp
# src/shogun/labels/MultilabelLabels.cpp src/shogun/labels/MultilabelLabels.h
# src/shogun/lib/OpenCV/CV2SGFactory.cpp src/shogun/lib/OpenCV/OpenCVTypeName.cpp
# src/shogun/lib/OpenCV/SG2CVFactory.cpp src/shogun/lib/OpenCV/CV2SGFactory.h
# src/shogun/lib/OpenCV/OpenCVTypeName.h src/shogun/lib/OpenCV/SG2CVFactory.h
# src/shogun/lib/external/shogun_libsvm.cpp src/shogun/lib/external/shogun_libsvm.h
# src/shogun/loss/AbsoluteDeviationLoss.cpp src/shogun/loss/ExponentialLoss.cpp
# src/shogun/loss/HuberLoss.cpp src/shogun/loss/AbsoluteDeviationLoss.h
# src/shogun/loss/ExponentialLoss.h src/shogun/loss/HuberLoss.h
# src/shogun/machine/GaussianProcessMachine.h src/shogun/machine/StochasticGBMachine.cpp
# src/shogun/machine/RandomForest.h src/shogun/machine/GaussianProcessMachine.cpp
# src/shogun/machine/RandomForest.cpp src/shogun/machine/gp/ConstMean.cpp
# src/shogun/machine/gp/DualVariationalGaussianLikelihood.cpp src/shogun/machine/gp/KLCholeskyInferenceMethod.cpp
# src/shogun/machine/gp/KLDualInferenceMethod.cpp src/shogun/machine/gp/KLLowerTriangularInferenceMethod.h
# src/shogun/machine/gp/SingleLaplacianInferenceMethodWithLBFGS.h src/shogun/machine/gp/LogitVGPiecewiseBoundLikelihood.h
# src/shogun/machine/gp/KLApproxDiagonalInferenceMethod.cpp src/shogun/machine/gp/KLInferenceMethod.h
# src/shogun/machine/gp/SingleLaplacianInferenceMethodWithLBFGS.cpp src/shogun/machine/gp/SoftMaxLikelihood.cpp
# src/shogun/machine/gp/SoftMaxLikelihood.h src/shogun/machine/gp/LogitDVGLikelihood.cpp
# src/shogun/machine/gp/LogitVGLikelihood.cpp src/shogun/machine/gp/LogitVGPiecewiseBoundLikelihood.cpp
# src/shogun/machine/gp/MatrixOperations.cpp src/shogun/machine/gp/MatrixOperations.h
# src/shogun/machine/gp/NumericalVGLikelihood.cpp src/shogun/machine/gp/ProbitVGLikelihood.cpp
# src/shogun/machine/gp/LogitDVGLikelihood.h src/shogun/machine/gp/StudentsTVGLikelihood.cpp
# src/shogun/machine/gp/VariationalGaussianLikelihood.cpp src/shogun/machine/gp/VariationalLikelihood.cpp
# src/shogun/machine/gp/StudentsTVGLikelihood.h src/shogun/machine/gp/MultiLaplacianInferenceMethod.h
# src/shogun/machine/gp/ConstMean.h src/shogun/machine/gp/DualVariationalGaussianLikelihood.h
# src/shogun/machine/gp/KLDualInferenceMethod.h src/shogun/machine/gp/KLLowerTriangularInferenceMethod.cpp
# src/shogun/machine/gp/NumericalVGLikelihood.h src/shogun/machine/gp/KLApproxDiagonalInferenceMethod.h
# src/shogun/machine/gp/KLCovarianceInferenceMethod.h src/shogun/machine/gp/LogitVGLikelihood.h
# src/shogun/machine/gp/VariationalGaussianLikelihood.h src/shogun/machine/gp/KLInferenceMethod.cpp
# src/shogun/machine/gp/LaplacianInferenceBase.h src/shogun/machine/gp/ProbitVGLikelihood.h
# src/shogun/machine/gp/VariationalLikelihood.h src/shogun/machine/gp/KLCovarianceInferenceMethod.cpp
# src/shogun/machine/gp/LaplacianInferenceBase.cpp src/shogun/machine/gp/KLCholeskyInferenceMethod.h
# src/shogun/machine/gp/MultiLaplacianInferenceMethod.cpp src/shogun/machine/StochasticGBMachine.h
# src/shogun/mathematics/linalg/internal/Block.h src/shogun/mathematics/linalg/internal/implementation/Add.h
# src/shogun/mathematics/linalg/internal/implementation/Convolve.h src/shogun/mathematics/linalg/internal/implementation/Dot.h
# src/shogun/mathematics/linalg/internal/implementation/ElementwiseProduct.h src/shogun/mathematics/linalg/internal/implementation/ElementwiseSquare.h
# src/shogun/mathematics/linalg/internal/implementation/MatrixProduct.h src/shogun/mathematics/linalg/internal/implementation/Max.h
# src/shogun/mathematics/linalg/internal/implementation/Scale.h src/shogun/mathematics/linalg/internal/implementation/SetRowsConst.h
# src/shogun/mathematics/linalg/internal/implementation/SpecialPurpose.h src/shogun/mathematics/linalg/internal/implementation/Sum.h
# src/shogun/mathematics/linalg/internal/implementation/VectorSum.h src/shogun/mathematics/linalg/internal/modules/Core.h
# src/shogun/mathematics/linalg/internal/modules/Redux.h src/shogun/mathematics/linalg/internal/modules/SpecialPurpose.h
# src/shogun/mathematics/linalg/internal/modules/Util.h src/shogun/mathematics/linalg/linalg.h
# src/shogun/multiclass/tree/CHAIDTree.h src/shogun/multiclass/tree/ID3ClassifierTree.h
# src/shogun/multiclass/tree/ID3TreeNodeData.h src/shogun/multiclass/tree/KNNHeap.h
# src/shogun/multiclass/tree/NbodyTreeNodeData.h src/shogun/multiclass/tree/TreeMachineNode.h
# src/shogun/multiclass/tree/BallTree.cpp src/shogun/multiclass/tree/C45ClassifierTree.cpp
# src/shogun/multiclass/tree/CARTree.cpp src/shogun/multiclass/tree/CHAIDTree.cpp
# src/shogun/multiclass/tree/ID3ClassifierTree.cpp src/shogun/multiclass/tree/KDTree.cpp
# src/shogun/multiclass/tree/KNNHeap.cpp src/shogun/multiclass/tree/NbodyTree.cpp
# src/shogun/multiclass/tree/RandomCARTree.cpp src/shogun/multiclass/tree/BallTree.h
# src/shogun/multiclass/tree/BinaryTreeMachineNode.h src/shogun/multiclass/tree/C45ClassifierTree.h
# src/shogun/multiclass/tree/C45TreeNodeData.h src/shogun/multiclass/tree/CARTree.h
# src/shogun/multiclass/tree/CARTreeNodeData.h src/shogun/multiclass/tree/CHAIDTreeNodeData.h
# src/shogun/multiclass/tree/KDTree.h src/shogun/multiclass/tree/NbodyTree.h
# src/shogun/multiclass/tree/RandomCARTree.h src/shogun/multiclass/tree/TreeMachine.h
# src/shogun/optimization/liblinear/shogun_liblinear.cpp src/shogun/optimization/liblinear/shogun_liblinear.h
# src/shogun/preprocessor/BAHSIC.h src/shogun/preprocessor/FeatureSelection.h
# src/shogun/preprocessor/KernelDependenceMaximization.h src/shogun/preprocessor/DependenceMaximization.cpp
# src/shogun/preprocessor/DependenceMaximization.h src/shogun/preprocessor/BAHSIC.cpp
# src/shogun/preprocessor/FeatureSelection.cpp src/shogun/preprocessor/KernelDependenceMaximization.cpp
# src/shogun/statistics/HSIC.cpp src/shogun/statistics/HypothesisTest.cpp
# src/shogun/statistics/IndependenceTest.cpp src/shogun/statistics/KernelIndependenceTest.cpp
# src/shogun/statistics/KernelSelection.cpp src/shogun/statistics/LinearTimeMMD.cpp
# src/shogun/statistics/MMDKernelSelection.cpp src/shogun/statistics/HSIC.h
# src/shogun/statistics/HypothesisTest.h src/shogun/statistics/IndependenceTest.h
# src/shogun/statistics/KernelIndependenceTest.h src/shogun/statistics/KernelSelection.h
# src/shogun/statistics/LinearTimeMMD.h src/shogun/statistics/MMDKernelSelection.h
# src/shogun/statistics/NOCCO.h src/shogun/statistics/QuadraticTimeMMD.h
# src/shogun/statistics/TwoSampleTest.h src/shogun/statistics/NOCCO.cpp
# src/shogun/statistics/QuadraticTimeMMD.cpp src/shogun/statistics/StreamingMMD.cpp
# src/shogun/statistics/TwoSampleTest.cpp src/shogun/statistics/StreamingMMD.h
#
# BSD (3 clause)
# --------------
# src/shogun/io/NeuralNetworkFileReader.cpp src/shogun/io/NeuralNetworkFileReader.h
# src/shogun/lib/GPUMatrix.h src/shogun/lib/GPUMatrix.cpp
# src/shogun/lib/GPUVector.cpp src/shogun/lib/GPUVector.h
# src/shogun/mathematics/linalg/internal/opencl_config.h src/shogun/mathematics/linalg/internal/opencl_util.h
# src/shogun/preprocessor/FisherLDA.h src/shogun/preprocessor/FisherLDA.cpp
# src/shogun/neuralnets/Autoencoder.cpp src/shogun/neuralnets/ConvolutionalFeatureMap.cpp
# src/shogun/neuralnets/DeepAutoencoder.cpp src/shogun/neuralnets/DeepBeliefNetwork.cpp
# src/shogun/neuralnets/NeuralConvolutionalLayer.cpp src/shogun/neuralnets/NeuralInputLayer.cpp
# src/shogun/neuralnets/NeuralLayer.cpp src/shogun/neuralnets/NeuralLinearLayer.cpp
# src/shogun/neuralnets/NeuralLogisticLayer.cpp src/shogun/neuralnets/NeuralRectifiedLinearLayer.cpp
# src/shogun/neuralnets/NeuralSoftmaxLayer.cpp src/shogun/neuralnets/RBM.cpp
# src/shogun/neuralnets/Autoencoder.h src/shogun/neuralnets/ConvolutionalFeatureMap.h
# src/shogun/neuralnets/DeepAutoencoder.h src/shogun/neuralnets/DeepBeliefNetwork.h
# src/shogun/neuralnets/NeuralConvolutionalLayer.h src/shogun/neuralnets/NeuralInputLayer.h
# src/shogun/neuralnets/NeuralLayer.h src/shogun/neuralnets/NeuralLinearLayer.h
# src/shogun/neuralnets/NeuralLogisticLayer.h src/shogun/neuralnets/NeuralNetwork.h
# src/shogun/neuralnets/NeuralRectifiedLinearLayer.h src/shogun/neuralnets/NeuralSoftmaxLayer.h
# src/shogun/neuralnets/RBM.h src/shogun/neuralnets/NeuralLayers.cpp
# src/shogun/neuralnets/NeuralLayers.h src/shogun/neuralnets/NeuralNetwork.cpp
#
# GPLv2+
# ------
# src/shogun/lib/external/ssl.cpp src/shogun/lib/external/ssl.h
# src/shogun/mathematics/munkres.cpp src/shogun/mathematics/munkres.h
# src/shogun/structure/DynProg.cpp src/shogun/transfer/multitask/MultitaskKernelMaskNormalizer.h
# src/shogun/transfer/multitask/MultitaskKernelMaskPairNormalizer.h src/shogun/transfer/multitask/MultitaskKernelPlifNormalizer.h
# src/shogun/transfer/multitask/MultitaskKernelTreeNormalizer.h
#
# GPLv2+ or LGPLv2+
# -----------------
# src/shogun/multiclass/LaRank.cpp src/shogun/multiclass/LaRank.h
#
# LGPLv2+
# -------
# src/shogun/classifier/svm/OnlineSVMSGD.cpp src/shogun/classifier/svm/SGDQN.cpp
# src/shogun/classifier/svm/SVMSGD.cpp src/shogun/classifier/svm/OnlineSVMSGD.h
# src/shogun/classifier/svm/SGDQN.h src/shogun/classifier/svm/SVMSGD.h
#
# MIT/X11 (BSD like)
# ------------------
# src/shogun/optimization/lbfgs/lbfgs.cpp src/shogun/optimization/lbfgs/lbfgs.h
#
License: GPLv3+ and BSD and GPLv2+ and (GPLv2+ or LGPLv2+) and GPLv3 and LGPLv2+ and MIT and (Public Domain or GPLv3+)
URL: http://%{name}-toolbox.org
# Sources for release-builds.
%{?rel_build:Source0: %{url}/archives/%{name}/releases/%{branch}/sources/%{name}-%{version}.tar.bz2}
# Sources for snapshot-builds.
%{!?rel_build:Source0: %{?giturl}archive/%{commit}.tar.gz#/%{gittar}}
Source1: %{name}.pc.in
Source99: http://googlemock.googlecode.com/files/gmock-1.7.0.zip
%if 0%{?rhel} && 0%{?rhel} <= 5
BuildRoot: %(/bin/mktemp -ud %{_tmppath}/%{name}-%{version}-%{release}-XXXXXX)
%endif # 0%%{?rhel} && 0%%{?rhel} <= 5
BuildRequires: arpack-devel
BuildRequires: arprec-devel
BuildRequires: atlas-devel
BuildRequires: blas-devel
BuildRequires: bzip2-devel
BuildRequires: chrpath
BuildRequires: ColPack-devel
BuildRequires: glpk-devel
BuildRequires: hdf5-devel
BuildRequires: iputils
BuildRequires: json-c-devel
BuildRequires: lapack-devel
BuildRequires: libcurl-devel
BuildRequires: libxml2-devel
BuildRequires: lpsolve-devel
BuildRequires: lzo-devel
BuildRequires: NLopt-devel
BuildRequires: ocl-icd-devel
BuildRequires: opencl-headers
BuildRequires: opencv-devel
BuildRequires: protobuf-devel
BuildRequires: qd-devel
BuildRequires: %{name}-data
BuildRequires: snappy-devel
BuildRequires: tapkee-devel
BuildRequires: xz-devel
BuildRequires: zlib-devel
%if 0%{?fedora} || 0%{?rhel} >= 7
BuildRequires: cmake
BuildRequires: eigen3-devel
BuildRequires: swig
%else # 0%%{?fedora} || 0%%{?rhel} >= 7
BuildRequires: cmake28
BuildRequires: eigen32-devel
BuildRequires: swig2
%endif # 0%%{?fedora} || 0%%{?rhel} >= 7
# Needed for testsuite.
BuildRequires: gdb
BuildRequires: valgrind
%if !%{with mono}
Obsoletes: mono-%{name} <= %{version}-%{release}
Obsoletes: mono-%{name}%{?_isa} <= %{version}-%{release}
%endif # !%%{with mono}
# Retiring octave-shogun on %%{arm}. See above.
%if (0%{?fedora} && 0%{?fedora} <= 26) && !%{with octave}
Obsoletes: octave-%{name} <= %{version}-%{release}
Obsoletes: octave-%{name}%{?_isa} <= %{version}-%{release}
%endif # (0%%{?fedora} && 0%%{?fedora} <= 26) && !%%{with octave}
# Copylib - Wildcard-exception granted by FPC.
# See: https://fedorahosted.org/fpc/ticket/174
Provides: bundled(dSFMT)
Provides: bundled(gnulib)
Provides: bundled(liblinear)
Provides: bundled(libsvm)
Provides: bundled(SFMT)
Provides: bundled(SVMlin)
%description
%{?common_description}
%post -p /sbin/ldconfig
%postun -p /sbin/ldconfig
%files
%doc %dir %{_pkgdocdir}
%if %{with license_dir}
%license COPYING
%else # %%{with license_dir}
%doc %{_pkgdocdir}/COPYING
%endif # %%{with license_dir}
%doc %{_pkgdocdir}/README.md
%{_libdir}/lib%{name}.so.*
###############################################################################
%if %{with cli}
%package cli
Summary: CLI-interface for %{name}
Requires: %{name}%{?_isa} == %{version}-%{release}
%description cli
This package contains the CLI-interface for %{name}.
%{?common_description}
%files cli
%doc %dir %{_pkgdocdir}
%doc %dir %{_pkgdocdir}/examples
%doc %{_pkgdocdir}/examples/cmdline_static
%doc %{_pkgdocdir}/examples/data
%doc %{_pkgdocdir}/examples/README.txt
%{_bindir}/%{name}
%endif # %%{with cli}
###############################################################################
%package devel
Summary: Development files for %{name}
Requires: arpack-devel%{?_isa}
Requires: arprec-devel%{?_isa}
Requires: atlas-devel%{?_isa}
Requires: blas-devel%{?_isa}
Requires: bzip2-devel%{?_isa}
Requires: ColPack-devel%{?_isa}
Requires: eigen3-devel
Requires: glpk-devel%{?_isa}
Requires: hdf5-devel%{?_isa}
Requires: json-c-devel%{?_isa}
Requires: lapack-devel%{?_isa}
Requires: libcurl-devel%{?_isa}
Requires: libxml2-devel%{?_isa}
Requires: lpsolve-devel%{?_isa}
Requires: lzo-devel%{?_isa}
Requires: NLopt-devel%{?_isa}
Requires: opencv-devel%{?_isa}
Requires: qd-devel%{?_isa}
Requires: snappy-devel%{?_isa}
Requires: tapkee-devel
Requires: xz-devel%{?_isa}
Requires: zlib-devel%{?_isa}
Requires: %{name}%{?_isa} == %{version}-%{release}
%description devel
This package contains files needed for development with %{name}.
%{?common_description}
%files devel
%doc %dir %{_pkgdocdir}
%doc %dir %{_pkgdocdir}/examples
%doc %{_pkgdocdir}/examples/data
%doc %{_pkgdocdir}/examples/lib%{name}
%doc %{_pkgdocdir}/examples/README.txt
%doc %{_pkgdocdir}/NEWS
%doc %{_pkgdocdir}/OpenCV_docs
%if %{with memtest}
%doc %{_pkgdocdir}/mem.%{?__isa}%{?dist}.log
%endif # %%{with memtest}
%if %{with testsuite}
%doc %{_pkgdocdir}/unit.%{?__isa}%{?dist}.log
%if %{with python3}
%doc %{_pkgdocdir}/unit.py3.%{?__isa}%{?dist}.log
%endif # %%{with python3}
%endif # %%{with testsuite}
%{_includedir}/%{name}-%{version}
%{_libdir}/lib%{name}.so
%{_libdir}/pkgconfig/%{name}.pc
###############################################################################
%package doc
Summary: Documentation files for %{name}
%if %{with noarch_doc}
BuildArch: noarch
%endif # %%{with noarch_doc}
BuildRequires: doxygen
BuildRequires: graphviz
BuildRequires: hardlink
%description doc
This package contains very detailed documentation,
and some great examples for %{name}.
If you need the Chinese API-docs, you would want to install
%{name}-doc-cn, too.
%{?common_description}
%files doc
%doc %dir %{_pkgdocdir}
%doc %exclude %{_pkgdocdir}/html_cn
%doc %exclude %{_pkgdocdir}/*.%{?__isa}%{?dist}.log
%doc %{_pkgdocdir}/*
%if %{with license_dir}
%license %{_datadir}/licenses/%{name}
%endif # %%{with license_dir}
###############################################################################
%package doc-cn
Summary: Documentation files for %{name} in Chinese language
Requires: %{name}-doc == %{version}-%{release}
%if %{with noarch_doc}
BuildArch: noarch
%endif # %%{with noarch_doc}
%description doc-cn
This package contains the documentation files for %{name} in Chinese
language.
%{?common_description}
%files doc-cn
%doc %dir %{_pkgdocdir}
%doc %{_pkgdocdir}/html_cn
###############################################################################
%if %{with java}
%package -n java-%{name}
Summary: Java-plugin for %{name}
BuildRequires: java-devel
BuildRequires: jblas
Requires: %{_sysconfdir}/profile.d
%if 0%{?fedora} >= 20 || 0%{?rhel} >= 7
Requires: java-headless
%else # 0%%{?fedora} >= 20 || 0%%{?rhel} >= 7
Requires: java
%endif # 0%%{?fedora} >= 20 || 0%%{?rhel} >= 7
Requires: jblas%{?_isa}
Requires: jpackage-utils
Requires: %{name}%{?_isa} == %{version}-%{release}
%description -n java-%{name}
This package contains the Java-plugin for %{name}.
%{?common_description}
%files -n java-%{name}
%doc %dir %{_pkgdocdir}
%doc %dir %{_pkgdocdir}/examples
%doc %{_pkgdocdir}/examples/data
%doc %{_pkgdocdir}/examples/java_modular
%doc %{_pkgdocdir}/examples/README.txt
%{_jnidir}/*
%{_libdir}/%{name}.java
%{_sysconfdir}/profile.d/%{name}-java.*sh
%endif # %%{with java}
###############################################################################
%if %{with lua}
%package -n lua-%{name}
# http://fedoraproject.org/wiki/PackagingDrafts/Lua
%{!?lua_ver: %global lua_ver %(%{_bindir}/lua -e 'print(string.sub(_VERSION, 5))' || echo 0)}
%global lualibdir %{_libdir}/lua/%{lua_ver}
%if 0%{?fedora} >= 22 || 0%{?rhel} >= 8
%global luanext 5.4
%endif # 0%%{?fedora} >= 22 || 0%%{?rhel} >= 8
%if (0%{?fedora} >= 20 && 0%{?fedora} <= 21)
%global luanext 5.3
%endif # (0%%{?fedora} >= 20 && 0%%{?fedora} <= 21)
%if (0%{?fedora} && 0%{?fedora} <= 19) || (0%{?rhel} && 0%{?rhel} <= 7)
%global luanext 5.2
%endif # (0%%{?fedora} && 0%%{?fedora} <= 19) || (0%%{?rhel} && 0%%{?rhel} <= 7)
Summary: LUA-plugin for %{name}
BuildRequires: lua-devel
Requires: lua%{?_isa}
%if 0%{?fedora} || 0%{?rhel} >= 7
Requires: lua(abi) == %{lua_ver}
%else # 0%%{?fedora} || 0%%{?rhel} >= 7
Requires: lua >= %{lua_ver}
Requires: lua < %{luanext}
%endif # 0%%{?fedora} || 0%%{?rhel} >= 7
Requires: %{name}%{?_isa} == %{version}-%{release}
%description -n lua-%{name}
This package contains the LUA-plugin for %{name}.
%{?common_description}
%files -n lua-%{name}
%doc %dir %{_pkgdocdir}
%doc %dir %{_pkgdocdir}/examples
%doc %{_pkgdocdir}/examples/data
%doc %{_pkgdocdir}/examples/lua_modular
%doc %{_pkgdocdir}/examples/README.txt
%{lualibdir}/libmod%{name}.so
%endif # %%{with lua}
###############################################################################
%if %{with mono}
%package -n mono-%{name}
Summary: Mono(C#)-plugin for %{name}
# On fc23+ we build against Mono >= 4.0.0.
%if 0%{?fedora} >= 23
BuildRequires: mono-devel >= 4.0.0
%else # 0%%{?fedora} >= 23
BuildRequires: mono-devel
%endif # 0%%{?fedora} >= 23
Requires: %{_sysconfdir}/profile.d
Requires: %{name}%{?_isa} == %{version}-%{release}
%description -n mono-%{name}
This package contains the Mono(C#)-plugin for %{name}.
%{?common_description}
%files -n mono-%{name}
%doc %dir %{_pkgdocdir}
%doc %dir %{_pkgdocdir}/examples
%doc %{_pkgdocdir}/examples/data
%doc %{_pkgdocdir}/examples/csharp_modular
%doc %{_pkgdocdir}/examples/README.txt
%{_libdir}/%{name}.mono
%{_sysconfdir}/profile.d/%{name}-mono.*sh
%endif # %%{with mono}
###############################################################################
%if %{with octave}
%package -n octave-%{name}
# https://fedoraproject.org/wiki/Packaging:Octave
%{!?octave_api: %global octave_api %(%{_bindir}/octave-config -p API_VERSION || echo 0)}
%global octave_octdir %(%{_bindir}/octave-config -p LOCALAPIOCTFILEDIR || echo '')
Summary: Octave-plugin for %{name}
BuildRequires: octave-devel
Requires: octave%{?_isa} >= 3.6
Requires: octave(api) == %{octave_api}
Requires: %{name}%{?_isa} == %{version}-%{release}
%description -n octave-%{name}
This package contains the Octave-plugin for %{name}.
%{?common_description}
%files -n octave-%{name}
%doc %dir %{_pkgdocdir}
%doc %dir %{_pkgdocdir}/examples
%doc %{_pkgdocdir}/examples/data
%doc %{_pkgdocdir}/examples/matlab_and_octave
%doc %{_pkgdocdir}/examples/octave_modular
%doc %{_pkgdocdir}/examples/README.txt
%{octave_octdir}/%{name}
%endif # %%{with octave}
###############################################################################
%if %{with perl}
%package -n perl-%{name}
Summary: Perl-plugin for %{name}
BuildRequires: perl-devel
Requires: perl%{?_isa}
Requires: perl(:MODULE_COMPAT_%(eval "$(%{__perl} -V:version)"; echo $version))
Requires: %{name}%{?_isa} = %{version}-%{release}
%description -n perl-%{name}
This package contains the Perl-plugin for %{name}.
%{?common_description}
%files -n perl-%{name}
%doc %dir %{_pkgdocdir}
%doc %dir %{_pkgdocdir}/examples
%doc %{_pkgdocdir}/examples/data
%doc %{_pkgdocdir}/examples/perl_modular
%doc %{_pkgdocdir}/examples/README.txt
%{perl_vendorarch}/*
%exclude %dir %{perl_vendorarch}/auto
%endif # %%{with perl}
###############################################################################
%if %{with python}
%if (0%{?fedora} >= 24) || (0%{?rhel} >= 8)
%package -n python2-%{name}
%else # (0%%{?fedora} >= 24) || (0%%{?rhel} >= 8)
%package -n python-%{name}
%endif # (0%%{?fedora} >= 24) || (0%%{?rhel} >= 8)
%{!?__python2: %global __python2 %{__python27}}
%{!?python2_sitearch: %global python2_sitearch %{python27_sitearch}}
%{!?python2_ver: %global python2_ver %(%{__python2} -c 'import platform; print platform.python_version();' || echo 0)}
Summary: Python-plugin for %{name}
%if 0%{?fedora} || 0%{?rhel} >= 7
BuildRequires: numpy
BuildRequires: python-docutils
BuildRequires: python-jinja2
BuildRequires: python2-devel
BuildRequires: scipy
Requires: numpy%{?_isa}
Requires: python%{?_isa}
Requires: scipy%{?_isa}
%else # 0%%{?fedora} || 0%%{?rhel} >= 7
BuildRequires: python27-numpy
BuildRequires: python27-docutils
BuildRequires: python27-jinja2
BuildRequires: python27-devel
Requires: python27%{?_isa}
Requires: python27-numpy%{?_isa}
Requires: python27-scipy%{?_isa}
%endif # 0%%{?fedora} || 0%%{?rhel} >= 7
Requires: %{name}%{?_isa} == %{version}-%{release}
%if (0%{?fedora} >= 24 && 0%{?fedora} <= 28) || (0%{?rhel} >= 8 && 0%{?rhel} <= 11)
Provides: python-%{name} == %{version}-%{release}
Provides: python-%{name}%{?_isa} == %{version}-%{release}
Obsoletes: python-%{name} <= 4.0.1-0.4
%endif # (0%%{?fedora} >= 24 && 0%%{?fedora} <= 28) || (0%%{?rhel} >= 8 && 0%%{?rhel} <= 11)
%if (0%{?fedora} >= 24) || (0%{?rhel} >= 8)
%description -n python2-%{name}
%else # (0%%{?fedora} >= 24) || (0%%{?rhel} >= 8)
%description -n python-%{name}
%endif # (0%%{?fedora} >= 24) || (0%%{?rhel} >= 8)
This package contains the Python-plugin for %{name}.
%{?common_description}
%if (0%{?fedora} >= 24) || (0%{?rhel} >= 8)
%files -n python2-%{name}
%else # (0%%{?fedora} >= 24) || (0%%{?rhel} >= 8)
%files -n python-%{name}
%endif # (0%%{?fedora} >= 24) || (0%%{?rhel} >= 8)
%doc %dir %{_pkgdocdir}
%doc %dir %{_pkgdocdir}/examples
%doc %{_pkgdocdir}/examples/data
%doc %{_pkgdocdir}/examples/python_modular
%doc %{_pkgdocdir}/examples/README.txt
%doc %{_pkgdocdir}/ipython-notebooks
%{python2_sitearch}/*
%endif # %%{with python}
###############################################################################
%if %{with python3}
%package -n python3-%{name}
Summary: Python-plugin for %{name}
BuildRequires: python3-devel
BuildRequires: python3-docutils
BuildRequires: python3-jinja2
BuildRequires: python3-numpy
BuildRequires: python3-scipy
Requires: python3%{?_isa}
Requires: python3-numpy%{?_isa}
Requires: python3-scipy%{?_isa}
Requires: %{name}%{?_isa} == %{version}-%{release}
%description -n python3-%{name}
This package contains the Python3-plugin for %{name}.
%{?common_description}
%files -n python3-%{name}
%doc %dir %{_pkgdocdir}
%doc %dir %{_pkgdocdir}/examples
%doc %{_pkgdocdir}/examples/data
%doc %{_pkgdocdir}/examples/python_modular
%doc %{_pkgdocdir}/examples/README.txt
%doc %{_pkgdocdir}/ipython-notebooks
%{python3_sitearch}/*
%endif # %%{with python3}
###############################################################################
%if %{with r}
%package -n R-%{name}
Summary: R-plugin for %{name}
BuildRequires: R-core-devel
Requires: R-core%{?_isa}
Requires: %{name}%{?_isa} == %{version}-%{release}
%description -n R-%{name}
This package contains the R-plugin for %{name}.
%{?common_description}
%files -n R-%{name}
%dir %{_libdir}/R/library/%{name}
%doc %dir %{_pkgdocdir}
%doc %dir %{_pkgdocdir}/examples
%doc %{_libdir}/R/library/%{name}/DESCRIPTION
%doc %{_libdir}/R/library/%{name}/demo
%doc %{_pkgdocdir}/examples/data
%doc %{_pkgdocdir}/examples/r_modular
%doc %{_pkgdocdir}/examples/README.txt
%{_libdir}/R/library/%{name}/libs
%{_libdir}/R/library/%{name}/Meta
%{_libdir}/R/library/%{name}/NAMESPACE
%{_libdir}/R/library/%{name}/R
%endif # %%{with r}
###############################################################################
%if %{with ruby}
%package -n ruby-%{name}
# For compatibility with RHEL <= 6.
%{!?ruby_vendorlibdir: %global ruby_vendorlibdir %(%{_bindir}/ruby -rrbconfig -e "puts RbConfig::CONFIG['sitelibdir']")}
%{!?ruby_vendorarchdir: %global ruby_vendorarchdir %(%{_bindir}/ruby -rrbconfig -e "puts RbConfig::CONFIG['sitearchdir']")}
# We need to pass the path for rubygem(narray) to CMake, so it can find it.
%global narray_gem %(%{_bindir}/gem list narray | %{__grep} narray | %{__sed} -e's! .!-!' -e 's!.$!!')
%if 0%{?fedora} >= 21 || 0%{?rhel} >= 8
%global narray_include %{_libdir}/gems/ruby/%{narray_gem}
%else # 0%{?fedora} >= 21 || 0%{?rhel} >= 8
%global narray_include %{_datadir}/gems/gems/%{narray_gem}
%endif # 0%{?fedora} >= 21 || 0%{?rhel} >= 8
%if 0%{?fedora} || 0%{?rhel} >= 7
%global narray_lib %{_libdir}/gems/ruby/%{narray_gem}/narray.so
%else # 0%{?fedora} || 0%{?rhel} >= 7
%global narray_lib %{ruby_vendorarchdir}/narray.so
%endif # 0%{?fedora} || 0%{?rhel} >= 7
Summary: Ruby-plugin for %{name}
BuildRequires: ruby-devel
BuildRequires: rubygem-narray-devel
%if 0%{?fedora} >= 19 || 0%{?rhel} >= 7
Requires: ruby(release)
%else # 0%%{?fedora} >= 19 || 0%%{?rhel} >= 7
Requires: ruby(abi) == %{?rhel:1.8}%{!?rhel:1.9.1}
%endif # 0%%{?fedora} >= 19 || 0%%{?rhel} >= 7
Requires: rubygem(narray)%{?_isa}
Requires: %{name}%{?_isa} == %{version}-%{release}
%description -n ruby-%{name}
This package contains the Ruby-plugin for %{name}.
%{?common_description}
%files -n ruby-%{name}
%doc %dir %{_pkgdocdir}
%doc %dir %{_pkgdocdir}/examples
%doc %{_pkgdocdir}/examples/data
%doc %{_pkgdocdir}/examples/README.txt
%doc %{_pkgdocdir}/examples/ruby_modular
%{ruby_vendorarchdir}/mod%{name}.rb
%{ruby_vendorarchdir}/mod%{name}.so
%endif # %%{with ruby}
###############################################################################
%prep
# Get amount of avail RAM.
%{__cat} /proc/meminfo
# Unpack sources.
%setup -q%{!?rel_build:n %{name}-%{commit}}
# Apply patches.
# Remove cluttering stuff and create some needed dirs.
%{__rm} -rf %{py3dir} %{_cmake_build_subdir} build data doc/tutorial third_party
%{__mkdir} -p %{_cmake_build_subdir} third_party/GoogleMock
# Scrub SVMlight.
%if !%{with svmlight}
./scripts/light-scrubber.sh
%endif # !%%{with svmlight}
# Unbundle Tapkee. This is pretty the same as we have in our repos.
%{__rm} -rf doc/md/LICENSE_tapkee.md
pushd src/%{name}/lib/tapkee
for _needed_sources in tapkee_%{name}.*
do
%{__sed} -e 's!<%{name}/lib/!<!g' \
-e 's!tapkee/tapkee_%{name}.hpp>$!%{name}/lib/&!g' \
-e 's!config.h>$!%{name}/lib/&!g' \
< ${_needed_sources} > ${_needed_sources}.mod && \
/bin/touch -r ${_needed_sources} ${_needed_sources}.mod
done
%{__rm} -rf */ *.{cpp,h,hpp}
for _needed_sources in tapkee_%{name}.*
do
%{__mv} ${_needed_sources} $(echo ${_needed_sources} | %{__sed} -e 's!\.mod$!!g')
done
popd
# Fix testsuite invocation for C#/Mono plugin.
%{__sed} -i -e 's!\${CSHARP_INTERPRETER}!%(which mono)!g' \
examples/undocumented/csharp_modular/CMakeLists.txt
# Fix finding PerlLibs and linking against HDF5.
%{__sed} -i -e 's!FindPerlLibs REQUIRED!PerlLibs REQUIRED!' \
-e '/SET.HDF5_LIBRARIES/d' \
CMakeLists.txt
# Ruby-plugins go to %%{ruby_vendorarchdir}, but on <= el6.
%if 0%{?fedora} >= 13 || 0%{?rhel} >= 7
%{__sed} -i -e 's!\${RUBY_SITE_ARCH_DIR}!\${RUBY_VENDORARCH_DIR}!g' \
src/interfaces/ruby_modular/CMakeLists.txt
%endif # 0%%{?fedora} >= 13 || 0%%{?rhel} >= 7
# Fix testsuite environment for Ruby.
%{__sed} -i -e 's!\${NARRAY_PATH}!%{narray_include}:&!' \
examples/undocumented/ruby_modular/CMakeLists.txt
# Copy the other sources into tree.
%{__install} -pm 0644 %{SOURCE99} third_party/GoogleMock
%if %{with python3}
# Copy all stuff into %%{py3dir} for the Python3-build.
%{__cp} -a . %{py3dir}
ln -fs $(/bin/pwd)/data %{py3dir}/data
%endif # %%{with python3}
# Copy data into proper location.
%{__cp} -a %{_shogun_data_dir} data
###############################################################################
%build
# These will be used for creation of CTest-files, only. There's no impact on
# the built binaries caused by them. They are needed to be defined on %%build,
# because CMake hardcodes them when creating the Makefiles and it's cache.
# We need to export a customized PYTHONPATH for testsuite.
export PYTHONPATH="${PYTHONPATH}:$(/bin/pwd)/%{_cmake_testinstall_dir}/%{python2_sitearch}/%{name}"
export PYTHONPATH="${PYTHONPATH}:$(/bin/pwd)/%{_cmake_testinstall_dir}/%{python2_sitearch}"
export PYTHONPATH="${PYTHONPATH}:$(/bin/pwd)/examples/undocumented/python_modular"
export PYTHONPATH="${PYTHONPATH}:%{python2_sitearch}:%{python2_sitelib}"
# We need to export a customized R_LIBS_USER for testsuite.
export R_LIBS_USER="${R_LIBS_USER}:$(/bin/pwd)/%{_cmake_testinstall_dir}%{_libdir}/R/library"
# We need to export some custom LD_LIBRARY_PATH for the tests, too.
export LD_LIBRARY_PATH="${LD_LIBRARY_PATH}:$(/bin/pwd)/%{_cmake_testinstall_dir}/%{_libdir}"
export LD_LIBRARY_PATH="${LD_LIBRARY_PATH}:%{_libdir}/atlas"
export LD_LIBRARY_PATH="${LD_LIBRARY_PATH}:%{_libdir}"
pushd %{_cmake_build_subdir}
%cmake \
-DCMAKE_BUILD_TYPE=DISTRIBUTION \
%ifarch %{ix86}
-DDISABLE_SSE=ON \
%endif # arch %%{ix86}
%if 0%{?fedora} >= 21 || 0%{?rhel} >= 8
-DATLAS_LAPACK="%{_libdir}/atlas/libtatlas.so" \
-DATLAS_LIBRARIES="%{_libdir}/atlas/libtatlas.so" \
%else # 0%%{?fedora} >= 21 || 0%%{?rhel} >= 8
-DUSE_ORIGINAL_LAPACK=ON \
%endif # 0%%{?fedora} >= 21 || 0%%{?rhel} >= 8
%if %{with cli}
-DCmdLineStatic=ON \
%endif # %%{with cli}
%if %{with java}
-DJavaModular=ON \
%endif # %%{with java}
%if %{with lua}
-DLuaModular=ON \
%endif # %%{with lua}
%if %{with mono}
-DCSharpModular=ON \
%endif # %%{with mono}
%if %{with octave}
-DOctaveModular=ON \
%endif # %%{with octave}
%if %{with opencv}
-DOpenCV=ON \
%endif # %%{with opencv}
%if %{with perl}
-DPerlModular=ON \
%endif # %%{with perl}
%if %{with python}
-DPythonModular=ON \
%endif # %%{with python}
%if %{with r}
-DRModular=ON \
%endif # %%{with r}
%if %{with reduce_swig_debug}
-DREDUCE_SWIG_DEBUG=ON \
%endif # %%{with reduce_swig_debug}
%if %{with ruby}
-DRUBY_NARRAY_INCLUDE_DIR="%{narray_include}" \
-DRUBY_NARRAY_LIBRARY="%{narray_lib}" \
-DRubyModular=ON \
%endif # %%{with ruby}
%if %{with swig_single_threaded}
-DSWIG_SINGLE_THREADED=ON \
%endif # %%{with swig_single_threaded}
%if !%{with svmlight}
-DUSE_SVMLIGHT=OFF \
%endif # !%%{with svmlight}
%if %{with testsuite}
-DBUILD_DASHBOARD_REPORTS=ON \
-DENABLE_PYTHON_DEBUG=ON \
-DENABLE_TESTING=ON \
%endif # %%{with testsuite}
-DENABLE_CCACHE=OFF \
-DPYTHON_EXECUTABLE="%{__python2}" \
..
# Build needs to be single-threaded because of high memory consumption, when
# building the swig-generated bindings.
%{__make} %{?_smp_mflags}
popd
# Build the Python3-version.
%if %{with python3}
export PYTHONPATH="$(/bin/pwd)/%{_cmake_testinstall_dir}/%{python3_sitearch}/%{name}"
export PYTHONPATH="${PYTHONPATH}:$(/bin/pwd)/%{_cmake_testinstall_dir}/%{python3_sitearch}"
export PYTHONPATH="${PYTHONPATH}:$(/bin/pwd)/examples/undocumented/python_modular"
export PYTHONPATH="${PYTHONPATH}:%{python3_sitearch}:%{python3_sitelib}"
pushd %{py3dir}/%{_cmake_build_subdir}
%cmake \
-DCMAKE_BUILD_TYPE=DISTRIBUTION \
%ifarch %{ix86}
-DDISABLE_SSE=ON \
%endif # arch %%{ix86}
%if 0%{?fedora} >= 21 || 0%{?rhel} >= 8
-DATLAS_LAPACK=%{_libdir}/atlas/libtatlas.so \
-DATLAS_LIBRARIES=%{_libdir}/atlas/libtatlas.so \
%else # 0%%{?fedora} >= 21 || 0%%{?rhel} >= 8
-DUSE_ORIGINAL_LAPACK=ON \
%endif # 0%%{?fedora} >= 21 || 0%%{?rhel} >= 8
%if %{with opencv}
-DOpenCV=ON \
%endif # %%{with opencv}
%if %{with reduce_swig_debug}
-DREDUCE_SWIG_DEBUG=ON \
%endif # %%{with reduce_swig_debug}
%if !%{with svmlight}
-DUSE_SVMLIGHT=OFF \
%endif # !%%{with svmlight}
%if %{with testsuite}
-DBUILD_DASHBOARD_REPORTS=ON \
-DENABLE_PYTHON_DEBUG=ON \
-DENABLE_TESTING=ON \
%endif # %%{with testsuite}
-DBUNDLE_EIGEN=OFF \
-DBUNDLE_NLOPT=OFF \
-DBUNDLE_JSON=OFF \
-DENABLE_CCACHE=OFF \
-DPythonModular=ON \
-DPYTHON_EXECUTABLE=%{__python3} \
..
%{__make} %{?_smp_mflags}
popd
%endif # %%{with python3}
# Building the autodocs.
pushd %{_cmake_build_subdir}
%{__make} doc
popd
###############################################################################
%install
%if 0%{?rhel} && 0%{?rhel} <= 5
%{__rm} -rf %{buildroot}
%endif # 0%%{?rhel} && 0%%{?rhel} <= 5
# We install to custom location first. This will be needed by testsuite, too.
export CUSTOM_INSTALL_DIR="$(/bin/pwd)/%{_cmake_testinstall_dir}/"
# Install the Python3-version first.
%if %{with python3}
pushd %{py3dir}/%{_cmake_build_subdir}
%{__make} install DESTDIR=${CUSTOM_INSTALL_DIR} %{?_smp_mflags}
popd
# Remove the installed headers and libshogun.so
%{__rm} -rf ${CUSTOM_INSTALL_DIR}%{_includedir} \
${CUSTOM_INSTALL_DIR}%{_libdir}/lib%{name}.so*
%endif # %%{with python3}
pushd %{_cmake_build_subdir}
%{__make} install DESTDIR=${CUSTOM_INSTALL_DIR} %{?_smp_mflags}
popd
# Move headers in versioned-subdir to avoid collisions.
%{__mkdir} -p ${CUSTOM_INSTALL_DIR}%{_includedir}/%{name}-%{version}
%{__mv} ${CUSTOM_INSTALL_DIR}%{_includedir}/%{name} \
${CUSTOM_INSTALL_DIR}%{_includedir}/%{name}-%{version}
%if %{with java}
# Move Java-bindings to proper location.
%{__mkdir} -p ${CUSTOM_INSTALL_DIR}%{_libdir}/%{name}.java \
${CUSTOM_INSTALL_DIR}%{_jnidir} \
${CUSTOM_INSTALL_DIR}%{_sysconfdir}/profile.d/
%{__mv} ${CUSTOM_INSTALL_DIR}%{_prefix}/lib/jni/libmod%{name}.so \
${CUSTOM_INSTALL_DIR}%{_libdir}/%{name}.java
%{__mv} ${CUSTOM_INSTALL_DIR}%{_javadir}/*.jar ${CUSTOM_INSTALL_DIR}%{_jnidir}
# Setup CLASSPATH-environment.
%{__cat} << EOF >> ${CUSTOM_INSTALL_DIR}%{_sysconfdir}/profile.d/%{name}-java.sh
CLASSPATH="${CLASSPATH}:%{_jnidir}/%{name}.jar"
CLASSPATH="${CLASSPATH}:%{_libdir}/%{name}.java/libmod%{name}.so"
export CLASSPATH
EOF
%{__cat} << EOF >> ${CUSTOM_INSTALL_DIR}%{_sysconfdir}/profile.d/%{name}-java.csh
set JCP_TEMP = getenv('CLASSPATH')
set JCP_TEMP = "$JCP_TEMP:%{_jnidir}/%{name}.jar"
set JCP_TEMP = "$JCP_TEMP:%{_libdir}/%{name}.java/libmod%{name}.so"
setenv CLASSPATH "$JCP_TEMP"
EOF
%endif # %%{with java}
%if %{with mono}
# Move Mono(C#)-bindings to the proper location.
%{__mkdir} -p ${CUSTOM_INSTALL_DIR}%{_libdir}/%{name}.mono
%{__mv} ${CUSTOM_INSTALL_DIR}%{_prefix}/lib/cli/%{name}/*mod%{name}* \
${CUSTOM_INSTALL_DIR}%{_libdir}/%{name}.mono
# Setup MONO_PATH-environment.
%{__cat} << EOF >> ${CUSTOM_INSTALL_DIR}%{_sysconfdir}/profile.d/%{name}-mono.sh
MONO_PATH="${MONO_PATH}:%{_libdir}/%{name}.mono"
export MONO_PATH
EOF
%{__cat} << EOF >> ${CUSTOM_INSTALL_DIR}%{_sysconfdir}/profile.d/%{name}-mono.csh
set MP_TEMP = getenv('MONO_PATH')
set MP_TEMP = "$MP_TEMP:%{_libdir}/%{name}.mono"
setenv MONO_PATH "$MP_TEMP"
EOF
%endif # %%{with mono}
# Fix-up the permissions for some plugins.
%{_bindir}/find ${CUSTOM_INSTALL_DIR} -depth -type f -name '*.so' -print0 | \
%{_bindir}/xargs -0 chmod -cf 0755
# Copy the custom installation to %%{buildroot} for having an installed
# version with rpaths preserved for the testsuite.
%{__cp} -a ${CUSTOM_INSTALL_DIR}/. %{buildroot}
# Kill rpath from binaries.
%{_bindir}/find %{buildroot}%{_libdir} -depth -type f -perm 0755 -print0 | \
%{_bindir}/xargs -0 chrpath -d -k
%{_bindir}/find %{buildroot}%{_bindir} -depth -type f -perm 0755 -print0 | \
%{_bindir}/xargs -0 chrpath -d -k
# Copy examples to keep them prestine. Testsuite will clutter them.
%{__mkdir} -p doc/examples
%{__cp} -a examples/documented/* doc/examples
# Create a working symlink to sample-data.
/bin/unlink doc/examples/data
/bin/ln -fs %{_datadir}/%{name}/data/toy doc/examples/data
# Remove unneeded examples and clutter.
%{_bindir}/find doc/examples -maxdepth 1 -name '*static' -print0 | \
%{__grep} -zv 'cmd' | %{_bindir}/xargs -0 %{__rm} -rf
%{_bindir}/find doc/examples -name '.rubygems' -print0 | \
%{_bindir}/xargs -0 %{__rm} -rf
# Install documentation-files to %%{_pkgdocdir}
%{__mkdir} -p %{buildroot}%{_pkgdocdir}
%{__cp} -a COPYING NEWS README* benchmarks doc/examples doc/images \
doc/ipython-notebooks doc/OpenCV_docs %{_cmake_build_subdir}/doc/html* \
%{buildroot}%{_pkgdocdir}
%if %{with license_dir}
%{__rm} -f %{buildroot}%{_pkgdocdir}/COPYING
%endif # 0%%{with license_dir}
# Add a README.txt for the examples.
%{__cat} << EOF >> %{buildroot}%{_pkgdocdir}/examples/README.txt
To run the examples, you will need to have the 'shogun-data'-package
installed, too.
EOF
# Add pkg-config file.
%{__mkdir} -p %{buildroot}%{_libdir}/pkgconfig/
%{__sed} -e 's!@_datadir@!%{_datadir}!g' -e 's!@_includedir@!%{_includedir}!g' \
-e 's!@_libdir@!%{_libdir}!g' -e 's!@name@!%{name}!g' \
-e 's!@_prefix@!%{_prefix}!g' -e 's!@url@!%{url}!g' \
-e 's!@version@!%{version}!g' \
< %{SOURCE1} > %{buildroot}%{_libdir}/pkgconfig/%{name}.pc
# Make sure all files in %%{_pkgdocdir} have mode 0644.
%{_bindir}/find %{buildroot}%{_pkgdocdir} -depth -type f -print0 | \
%{_bindir}/xargs -0 chmod 0644
# Remove unneeded stuff, e.g. compiled examples in %%{buildroot}%%{_datadir},
# build-system files in examples and 0-size files in %%{buildroot}.
%{__rm} -rf %{buildroot}%{_datadir}/%{name}/examples
%{_bindir}/find %{buildroot} -depth -type f -size 0 -print0 | \
%{_bindir}/xargs -0 %{__rm} -rf
for _del in 'CMake*' 'Makefile*' '*.log' '*.map' '*.md5' '*.sh'
do
%{_bindir}/find %{buildroot} -depth -type f -name "${_del}" -print0 | \
%{_bindir}/xargs -0 %{__rm} -rf
done
# Hardlink API-docs.
/sbin/hardlink -v %{buildroot}%{_pkgdocdir}/html
/sbin/hardlink -v %{buildroot}%{_pkgdocdir}/html_cn
# Manually byte-compile Python-stuff…
%py_byte_compile %{__python2} %{buildroot}%{python2_sitearch}
%if %{with python3}
%py_byte_compile %{__python3} %{buildroot}%{python3_sitearch}
%endif # %%{with python3}
###############################################################################
%check
%if %{with testsuite}
pushd %{_cmake_build_subdir}
%if %{with memtest}
# Memory tests -- to find reasons for possible segfaults.
# These are allowed to fail and done in parallel.
%{_bindir}/ctest \
%{?_smp_mflags} \
-D ExperimentalMemCheck \
--timeout 5400 \
--tests-regex "^lib%{name}-.*|^unit-.*" \
--output-log %{buildroot}%{_pkgdocdir}/mem.%{?__isa}%{?dist}.log \
--output-on-failure || :
%endif # %%{with memtest}
# Disabled tests:
#
# These tests need SVM^light, which we cannot ship in Fedora.
%if !%{with svmlight}
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-SVRLight_0017_1_15_Gaussian_1en05_001"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-SVRLight_023_1_15_Gaussian_1en05_001"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-SVRLight_15_1_15_Gaussian_1en05_001"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-SVRLight_30_1_15_Gaussian_00001_0001"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-SVRLight_30_1_15_Gaussian_00001_001"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-SVRLight_30_1_15_Gaussian_1en05_001"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-mkl_regression_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-mkl_binclass_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|python_modular-mkl_regression_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|python_modular-mkl_binclass_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|java_modular-mkl_binclass_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|csharp-mkl_binclass_modular"
%endif # !%%{with svmlight}
# Tests fail because of missing dataset.
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-features_dense_protocols_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-features_dense_zero_copy_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-features_string_file_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-regression_gaussian_process_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|python_modular-features_string_file_modular"
# These tests are failing in Fedora 21+, because of some changes in json-c 0.12.
%if 0%{?fedora} >= 21
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-serialization_complex_example"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-SerializationJSON"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|python_modular-serialization_complex_example"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|python_modular-serialization_string_kernels_modular"
%endif # 0%%{?fedora} >= 21
# These test fail on ix86, because of memory-exhaustion or misalignments in
# floatingpoint-precission.
%ifarch %{ix86}
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-multiclass_cartree_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-kernel_spline_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-kernel_wavelet_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-distance_geodesic_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-distance_jensen_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-kernel_sparse_poly_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-kernel_salzberg_word_string_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-preprocessor_normone_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-classifier_multiclasslibsvm_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-kernel_wave_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-kernel_histogram_word_string_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-kernel_poly_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-regression_gaussian_process_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-distance_sparseeuclidean_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-classifier_averaged_perceptron_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-preprocessor_prunevarsubmean_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-regression_cartree_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-classifier_svmocas_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-regression_libsvr_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-distance_cosine_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-kernel_combined_custom_poly_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-statistics_mmd_kernel_selection_combined"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-CARTree"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-LinearTimeMMD"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-MMDKernelSelectionCombOpt"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-MMDKernelSelectionOpt"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-MMDKernelSelectionCombMaxL2"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-SparseMatrixOperator"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-CGMShiftedFamilySolver"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-CMath"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-Statistics"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-PeriodicKernelTest"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-SGSparseMatrix"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|libshogun-converter_multidimensionalscaling"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|python_modular-multiclass_cartree_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|python_modular-regression_cartree_modular"
%endif # arch %%{ix86}
# These test fail on arm, because of memory-exhaustion or misalignments in
# floatingpoint-precission or timeout.
%ifarch %{arm}
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-transfer_multitask_leastsquares_regression"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-library_fisher2x3_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-library_time"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-classifier_averaged_perceptron_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-CustomKernelTest"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-BAHSIC"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-Statistics"
# Timeout after ~ 25 mins.
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|java_modular-kernel_auc_modular"
%endif # arch %%{arm}
# These test fail on aarch64, because of memory-exhaustion or misalignments in
# floatingpoint-precission or timeout.
%ifarch aarch64
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-SVMOcas_30_1en05_16_05_False"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-SVMOcas_30_1en05_1_05_False"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-kernel_poly_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-kernel_sigmoid_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-classifier_libsvm_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-regression_gaussian_process_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-classifier_averaged_perceptron_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-preprocessor_normone_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-kernel_sparse_poly_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-distance_sparseeuclidean_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-distance_jensen_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-classifier_svmocas_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-kernel_salzberg_word_string_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-classifier_multiclasslibsvm_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-kernel_wave_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-distance_geodesic_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-preprocessor_prunevarsubmean_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-distance_cosine_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-library_fisher2x3_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-regression_libsvr_modular"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-BAHSIC"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-CustomKernelTest"
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|unit-Statistics"
%endif # arch aarch64
# Export the list.
EXCLUDE_FROM_TESTS="$(echo ${EXCLUDE_FROM_TESTS} | %{__sed} -e's!^|!!' -e's!|$!!')"
export EXCLUDE_FROM_TESTS
# Unit && integration tests -- usual testsuite.
%{_bindir}/ctest \
%{?_smp_mflags} \
--exclude-regex "${EXCLUDE_FROM_TESTS}" \
--output-log %{buildroot}%{_pkgdocdir}/unit.%{?__isa}%{?dist}.log \
--output-on-failure
popd
%if %{with python3}
# These test fail on ix86, because of memory-exhaustion or misalignments in
# floatingpoint-precission.
%ifarch %{ix86} %{arm}
EXCLUDE_FROM_TESTS="${EXCLUDE_FROM_TESTS}|integration-python_modular-tester-mathematics_linsolver_cg"
%endif # arch %%{ix86} %%{arm}
# Export the list.
EXCLUDE_FROM_TESTS="$(echo ${EXCLUDE_FROM_TESTS} | %{__sed} -e's!^|!!' -e's!|$!!')"
export EXCLUDE_FROM_TESTS
pushd %{py3dir}/%{_cmake_build_subdir}
# Unit && integration tests -- usual testsuite, but without running
# libshogun-tests twice. They've been run previously anyways.
%{_bindir}/ctest \
%{?_smp_mflags} \
--exclude-regex "^lib%{name}-.*|^unit-.*|${EXCLUDE_FROM_TESTS}" \
--output-log %{buildroot}%{_pkgdocdir}/unit.py3.%{?__isa}%{?dist}.log \
--output-on-failure
popd
%endif # %%{with python3}
%endif # %%{with testsuite}
###############################################################################
%if 0%{?rhel} && 0%{?rhel} <= 5
%clean
%{__rm} -rf %{buildroot}
%endif # 0%%{?rhel} && 0%%{?rhel} <= 5
###############################################################################
%changelog
* Tue Jan 26 2016 Björn Esser <fedora@besser82.io> - 4.0.1-0.9.git20160125.0382808
- updated to new snapshot git20160125.038280845fd7fb886f4459996f1405f8ca8c1612
- re-enable mono, issues with mono >= 4 are fixed upstream (#1223446)
* Thu Jan 21 2016 Orion Poplawski <orion@cora.nwra.com> - 4.0.1-0.8.git20151219.af8c1df
- Rebuild for hdf5 1.8.16
* Sat Jan 16 2016 Mamoru TASAKA <mtasaka@fedoraproject.org> -4.0.1-0.7.git20151219.af8c1df
- Rebuild for https://fedoraproject.org/wiki/Changes/Ruby_2.3
* Mon Dec 21 2015 Björn Esser <fedora@besser82.io> - 4.0.1-0.6.git20151219.af8c1df
- updated to new snapshot git20151219.af8c1df859ed3d5780bbea5615a5c523e5651db9
- remove Patch0001, fixed in upstream-tarball
* Thu Dec 17 2015 Björn Esser <fedora@besser82.io> - 4.0.0-0.5.git20151217.7e4ac13
- updated to new snapshot git20151217.7e4ac1327cc3ee4b09f498c1b778d13f37ff0956
- updated %%description
- add modshogun.rb to ruby-shogun
- add Patch0001: revert removal of migration-framework
* Tue Dec 08 2015 Björn Esser <fedora@besser82.io> - 4.0.1-0.4.git20150913.d8eb73d
- changing name of python2-subpkg
* Sat Nov 21 2015 Björn Esser <fedora@besser82.io> - 4.0.1-0.3.git20150913.d8eb73d
- updated to new snapshot git20150913.d8eb73dd89f47e0da28f07163c4f635b96d0ec00
- removed ChangeLog from package, deleted in upstream tarball
* Tue Nov 10 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 4.0.1-0.2.git20150808.779c3ad
- Rebuilt for https://fedoraproject.org/wiki/Changes/python3.5
* Sat Aug 08 2015 Björn Esser <bjoern.esser@gmail.com> - 4.0.1-0.1.git20150808.779c3ad
- updated to new snapshot git20150808.779c3ada68ae535062346ef71e6c1c39e482a8ca
- drop all patches, applied in upstream tarball
- add more testsuite-excludes for ix86
- disable memtests on %%arm
* Fri Aug 07 2015 Björn Esser <bjoern.esser@gmail.com> - 4.0.0-7
- rebuilt with full hardening
- add Patch11-13: enable CMake-policy CMP0056
- add Patch14: fix handling of C[XX]FLAGS
* Fri Aug 07 2015 Björn Esser <bjoern.esser@gmail.com> - 4.0.0-6
- temporarily disabling Mono-bindings on Fedora 23+
* Fri Jun 19 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 4.0.0-5
- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild
* Sat May 23 2015 Björn Esser <bjoern.esser@gmail.com> - 4.0.0-4
- fix: Build fails on fc23+ because of hardening
- fix: BR: mono >= 4.0.0
- exclude tests, which are failing on aarch64 (#1222401)
* Tue May 19 2015 Peter Robinson <pbrobinson@fedoraproject.org> 4.0.0-3
- Rebuild (mono4)
* Sun May 17 2015 Orion Poplawski <orion@cora.nwra.com> - 4.0.0-2
- Rebuild for hdf5 1.8.15
* Wed Apr 29 2015 Björn Esser <bjoern.esser@gmail.com> - 4.0.0-1
- new release v4.0.0 (#1105909, #1183622)
- add Patch0: fixes double delete[] and tests with swig 3.x
- add Patch1: fixes to CMake-buildsys
- add Patch2,3: enable python-debugging in testsuite
- add Patch4: optionally disabling sse and sse2 features
- add Patch5: requiring 'rubygems' in testsuite
- add Patch6: testing Py structure hierarchical multilabel classification
- add Patch7: replace deprecated json-c functions
- add Patch8: obey $ENV{R_LIBS_USER} when running tests
- add Patch9: reduce debuginfo of swig-generated bindings
- add Patch10: make sure all modular interfaces are build single-threaded
- add automatic CLASSPATH-export for java-shogun
- add automatic MONO_PATH-export for mono-shogun
- add pkg-config file for easier use with gcc
- move headers to versioned include-subdir to avoid collisions
- retiring octave-shogun on %%{arm}
- R-shogun is stable now (#1043885)
- use atlas' clapack on <= fc20 and <= el7
- narrowed the list of failing tests and don't ignore fails anymore
- remove obsolete sed-kludges
- use temporary files instead of pipes to pass data between different gcc instances
- builds are running multi-threaded again
- use %%__isa instead of %%_arch for file / dir naming
- add memory-tests to find reasons for possible segfaults
- run memory- and unit-test multi-threaded
- use %%license when available
- use %%bconds instead of %%global madness
- spec-file cosmetics
* Wed Apr 29 2015 Kalev Lember <kalevlember@gmail.com> - 3.2.0.1-0.35.git20141224.d71e19a
- Rebuilt for protobuf soname bump
* Thu Apr 23 2015 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.34.git20141224.d71e19a
- rebuild for so-name bump in protobuf-2.6.1 (libprotobuf.so.9)
* Sun Jan 18 2015 Mamoru TASAKA <mtasaka@fedoraproject.org> - 3.2.0.1-0.33.git20141224.d71e19a
- Rebuild for https://fedoraproject.org/wiki/Changes/Ruby_2.2
- Once reduce debuginfo verbosity on arm to reduce memory comsumption
- And once mark -doc, -doc-cn arch dependent perhaps due to above
* Wed Jan 07 2015 Orion Poplawski <orion@cora.nwra.com> - 3.2.0.1-0.32.git20141224.d71e19a
- Rebuild for hdf5 1.8.14
* Wed Dec 24 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.31.git20141224.d71e19a
- updated to new snapshot git20141224.d71e19aa5a575b2b4e52c908a694eb1db7afc973
- reduced number of make-jobs on %%{arm}
- conditionalized and disabled OpenCV-integration
* Tue Dec 23 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.30.git20141223.c329375
- updated to new snapshot git20141223.c32937574df1c560ce7c10f1b8860679ce011a8b
- added BR: ocl-icd-devel, opencl-headers
- enabled OpenCV-features and R-shogun
- purged light-scrubber.sh from repo, now shipped with tarball
- updated documentation-files
- build mono-shogun on %%{mono_arches}, only
- install documentation-files to %%{_pkgdocdir}
* Mon Sep 01 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.29.git20140901.705b7de
- updated to new snapshot git20140901.705b7dea7093cb094fe90fcebac20b7e7d1debcd
* Mon Aug 18 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 3.2.0.1-0.28.git20140804.96f3cf3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild
* Mon Aug 04 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.27.git20140804.96f3cf3
- updated to new snapshot git20140804.96f3cf3ce58514299f98e688b7c43e057ad4fa41
* Mon Jul 21 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.26.git20140721.81c0008
- updated to new snapshot git20140721.81c00087da6f05d36aec410fef0fcef5be490f42
- enable SSE2 for %%{ix86}, because dSFMT-build will fail otherwise
- switch back to a monolithic build with limeted parallelization
- temporarily discard errors from testsuite
* Thu Jul 17 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.25.git20140717.1ba2924
- updated to new snapshot git20140717.1ba29247b850adef1b866a6c2112a6483c88428e
* Wed Jun 18 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.24.git20140618.2f7681e
- updated to new snapshot git20140618.2f7681ed0c1849088ee5bcc48b91a1c970ff3a9b
- excluded segfaulting tests
* Tue Jun 17 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.23.git20140616.31f5609
- updated to new snapshot git20140616.31f5609f7a7345ca05b5c1f8c7425236da2270df
* Thu Jun 05 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.22.git20140604.98900c2
- export additional C[XX]FLAGS on 32Bit-arches for SSE and SSE2
- fix typemapping for Mono (C#) with swig >= 3.0.0
- exclude testing python_modular on Fedora >= 21, segfaults related to swig3
- build libshogun with full parallelization, but the swig-bindings
* Thu Jun 05 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.21.git20140604.98900c2
- updated to new snapshot git20140604.98900c2996ccc4509099a6a337a71d7ca9991bd6
* Mon May 26 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.20.git20140526.7587570
- updated to new snapshot git20140526.758757094c30ae249f5ddc84f3cdc11b4b4203c4
- dropped obsolete BR LaTeX from -doc-pkg
* Mon May 26 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.19.git20140523.681b5ec
- updated to new snapshot git20140523.681b5ec17c0ca9c98cb54047dcd679bec9171989
* Sat May 17 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.18.git20140516.96b815f
- adapted the logic for finding rubygem-narray on Fedora >= 21
* Sat May 17 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.17.git20140516.96b815f
- updated to new snapshot git20140516.96b815fd1fa9769a24122f9016ff5a685a8a6944
* Thu Apr 24 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.16.git20140423.68a5124
- updated to new snapshot git20140423.68a5124bec8df5a013b2406e8c00d93ab83bf88d
* Fri Apr 18 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.15.git20140418.34f9672
- updated to new snapshot git20140418.34f96727f343b7f7f5e0426dbbf579f5dbc0f51e
* Mon Apr 14 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.14.git20140414.b0146f8
- updated to new snapshot git20140414.b0146f8b7314a4de25273dab2d6da4a37044bbec
* Tue Mar 18 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.13.git20140318.6134bc2
- updated to new snapshot git20140318.6134bc2e1e721726102624b372c1f8e7a31816df
* Mon Mar 17 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.12.git20140317.6ee3991
- updated to new snapshot git20140317.6ee39918dc99e72c23a30419a608f11217146e26
* Sat Mar 15 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.11.git20140315.55912da
- updated to new snapshot git20140315.55912da6dd499632ab2371cbbde9fdafaa913cac
* Fri Mar 14 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.10.git20140313.9b6dcd2
- updated to new snapshot git20140313.9b6dcd2a077868259029ce2f28b306e56b30bf2f
* Thu Mar 13 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.9.git20140313.e380071
- updated to new snapshot git20140313.e380071f5a8a5d35c0b33ea0ab55810ef9845354
* Thu Mar 13 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.8.git20140312.d9c535e
- updated to new snapshot git20140312.d9c535e85ed8dc61d537052a9abce200782b87b2
* Fri Mar 07 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.7.git20140307.c281eaa
- updated to new snapshot git20140307.c281eaaf51f44c16c9a7ded0678cbbac265714f6
* Wed Mar 05 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.6.git20140305.9c67564
- updated to new snapshot git20140305.9c67564278abd5a13efe9ae016f8b3e01bf209f9
* Wed Mar 05 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.5.git20140305.9b37dc1
- use new macros provided by shogun-data-pkg
* Wed Mar 05 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.4.git20140305.9b37dc1
- use `CMAKE_BUILD_TYPE=Release` for the Python3-version, too
* Wed Mar 05 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.3.git20140305.9b37dc1
- fixed year in git-snapshot-date
* Wed Mar 05 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.2.git20130305.9b37dc1
- updated to new snapshot git20130305.9b37dc1e630d54a9c16f2d19b6a10c34d8aef73a
* Tue Mar 04 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0.1-0.1.git20130303.df06a0e
- updated to new snapshot git20130303.df06a0e1a7e3551b0bee218246cfc4bf1a4696d8
* Tue Mar 04 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0-2
- require java-headless on Fedora >= 20 or RHEL >= 7
- exclude some tests on %%{arm} arches only
* Sun Feb 23 2014 Björn Esser <bjoern.esser@gmail.com> - 3.2.0-1
- new upstream release: v3.2.0 (#1066944)
- enabled build of Java-bindings (#1043882)
- enabled build of Python3-bindings (#1043884)
- dropped Patch0 for Octave 3.8.0 (#1047053)
- bumped required data-version to 0.8 (#1068941)
- split-off scrubber-script to seperate script
- exclude some tests on 32-Bit arches only
* Wed Jan 08 2014 Orion Poplawski <orion@cora.nwra.com> - 3.1.1-2
- Add patch for octave 3.8.0 support
* Mon Jan 06 2014 Björn Esser <bjoern.esser@gmail.com> - 3.1.1-1
- new upstream release: v3.1.1
- data-files are now moved into a separate package
- added example-applications to doc-pkg
* Sat Dec 28 2013 Björn Esser <bjoern.esser@gmail.com> - 3.1.0-0.13.git20131226.1c7fbaa
- rebuild for octave-3.8.0-rc2
* Thu Dec 26 2013 Björn Esser <bjoern.esser@gmail.com> - 3.1.0-0.12.git20131226.1c7fbaa
- updated to new snapshot git20131226.1c7fbaa732c8476b2df26bca2ae93de666959092
- updated to new testsuite-data git20131222.0bbb04f354a29ed3ab43ce002388b79bb274e886
* Fri Dec 20 2013 Björn Esser <bjoern.esser@gmail.com> - 3.1.0-0.11.git20131219.207a709
- rebuild for NLopt-2.4.1
* Fri Dec 20 2013 Björn Esser <bjoern.esser@gmail.com> - 3.1.0-0.10.git20131219.207a709
- rebuild for arprec-2.2.17
- added a line about `no-SVM^light-support` in %%description
- minor indention improvements for the list of bindings in %%description
- fixed `macro-in-comment %%{mono_arches}`
- added %%ifarch %%{mono_arches} for mono-shogun-pkg for building it on those
arches, only
* Thu Dec 19 2013 Björn Esser <bjoern.esser@gmail.com> - 3.1.0-0.9.git20131219.207a709
- updated to new snapshot git20131219.207a70972e794df28f0fc67309f217f7fbf3b4e7
* Tue Dec 17 2013 Björn Esser <bjoern.esser@gmail.com> - 3.1.0-0.8.git20131217.70f2657
- copying and packaging the prestine examples to another location is better
and less error-prone then removing the clutter left by testsuite afterwards
* Tue Dec 17 2013 Björn Esser <bjoern.esser@gmail.com> - 3.1.0-0.7.git20131217.70f2657
- remove more possible clutter from testsuite
- re-enable mldata-based tests when there is internet connectivity
* Tue Dec 17 2013 Björn Esser <bjoern.esser@gmail.com> - 3.1.0-0.6.git20131217.70f2657
- updated to new snapshot git20131217.70f26573a501791e11097615296127c1c36904d7
* Tue Dec 17 2013 Björn Esser <bjoern.esser@gmail.com> - 3.1.0-0.5.git20131216.7230f07
- temporarily disabled mono-shogun on all arm-arches
* Tue Dec 17 2013 Björn Esser <bjoern.esser@gmail.com> - 3.1.0-0.4.git20131216.7230f07
- enable build of mono-shogun, since it should be fixed in current
checkout (#1043859)
* Tue Dec 17 2013 Björn Esser <bjoern.esser@gmail.com> - 3.1.0-0.3.git20131216.7230f07
- updated to new snapshot git20131216.7230f074751a97842170b8a5f9c69fbd9b8287ca
* Tue Dec 17 2013 Björn Esser <bjoern.esser@gmail.com> - 3.1.0-0.2.git20131212.70e774d
- remove cluttering *.map *.md5 in autodocs (#1043856)
- remove possible clutter from testsuite
* Mon Dec 16 2013 Björn Esser <bjoern.esser@gmail.com> - 3.1.0-0.1.git20131212.70e774d
- updated to latest git-snapshot (#1043283)
- disabled shogun-mono, because it segfaults currently and has some severe
problems on ARMv7hl
* Sun Dec 15 2013 Björn Esser <bjoern.esser@gmail.com> - 3.0.0-1
- Initial rpm release (#1043283)